RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 ARPP21Q9UBL0 812 aaPredicted RBP15.39■□□□□ 0.05
LSM8-201ENST00000249299 SCN9AQ15858 1988 aa15.38■□□□□ 0.05
LSM8-201ENST00000249299 MCM2P49736 904 aa15.38■□□□□ 0.05
LSM8-201ENST00000249299 AMOTL1Q8IY63 956 aa15.38■□□□□ 0.05
LSM8-201ENST00000249299 SNX21Q969T3 373 aa15.38■□□□□ 0.05
LSM8-201ENST00000249299 IDI2Q9BXS1 227 aa15.38■□□□□ 0.05
LSM8-201ENST00000249299 RNF41Q9H4P4 317 aaPredicted RBP15.38■□□□□ 0.05
LSM8-201ENST00000249299 EPB41L4AQ9HCS5 686 aaPredicted RBP15.38■□□□□ 0.05
LSM8-201ENST00000249299 PALD1Q9ULE6 856 aa15.38■□□□□ 0.05
LSM8-201ENST00000249299 MYO5AQ9Y4I1 1855 aaKnown RBP15.37■□□□□ 0.05
LSM8-201ENST00000249299 F8W031 263 aaPredicted RBP15.37■□□□□ 0.05
LSM8-201ENST00000249299 PRKAB2O43741 272 aa15.37■□□□□ 0.05
LSM8-201ENST00000249299 USP5P45974 858 aa15.37■□□□□ 0.05
LSM8-201ENST00000249299 SCNN1DP51172 638 aa15.37■□□□□ 0.05
LSM8-201ENST00000249299 TEX11Q8IYF3 940 aa15.37■□□□□ 0.05
LSM8-201ENST00000249299 SH3RF3Q8TEJ3 882 aaPredicted RBP15.37■□□□□ 0.05
LSM8-201ENST00000249299 CNNM2Q9H8M5 875 aa15.37■□□□□ 0.05
LSM8-201ENST00000249299 ZSWIM6Q9HCJ5 1215 aa15.37■□□□□ 0.05
LSM8-201ENST00000249299 GOLGB1Q14789 3259 aaKnown RBP15.37■□□□□ 0.05
LSM8-201ENST00000249299 ZNF646O15015 1829 aaPredicted RBP15.36■□□□□ 0.05
LSM8-201ENST00000249299 ST18O60284 1047 aa15.36■□□□□ 0.05
LSM8-201ENST00000249299 SLC3A2P08195 630 aaKnown RBP15.36■□□□□ 0.05
LSM8-201ENST00000249299 DLGAP5Q15398 846 aa15.36■□□□□ 0.05
LSM8-201ENST00000249299 CFAP100Q494V2 611 aa15.36■□□□□ 0.05
LSM8-201ENST00000249299 FBXL16Q8N461 479 aa15.36■□□□□ 0.05
LSM8-201ENST00000249299 ZBED3Q96IU2 234 aaPredicted RBP15.36■□□□□ 0.05
LSM8-201ENST00000249299 MTA3Q9BTC8 594 aa15.36■□□□□ 0.05
LSM8-201ENST00000249299 ALDH8A1Q9H2A2 487 aaPredicted RBP15.36■□□□□ 0.05
LSM8-201ENST00000249299 USP40Q9NVE5 1235 aa15.36■□□□□ 0.05
LSM8-201ENST00000249299 WDR19Q8NEZ3 1342 aa15.35■□□□□ 0.05
LSM8-201ENST00000249299 FGRP09769 529 aa15.35■□□□□ 0.05
LSM8-201ENST00000249299 TRDNQ13061 729 aa15.35■□□□□ 0.05
LSM8-201ENST00000249299 BECN1Q14457 450 aa15.35■□□□□ 0.05
LSM8-201ENST00000249299 CDC42EP5Q6NZY7 148 aa15.35■□□□□ 0.05
LSM8-201ENST00000249299 TGFBRAP1Q8WUH2 860 aa15.35■□□□□ 0.05
LSM8-201ENST00000249299 SDR42E1Q8WUS8 393 aa15.35■□□□□ 0.05
LSM8-201ENST00000249299 STAG1Q8WVM7 1258 aa15.35■□□□□ 0.05
LSM8-201ENST00000249299 NEK1Q96PY6 1258 aa15.35■□□□□ 0.05
LSM8-201ENST00000249299 DHX36Q9H2U1 1008 aaKnown RBP15.35■□□□□ 0.05
LSM8-201ENST00000249299 ZNF287Q9HBT7 754 aa15.35■□□□□ 0.05
LSM8-201ENST00000249299 RNF181Q9P0P0 153 aa15.35■□□□□ 0.05
LSM8-201ENST00000249299 CYP46A1Q9Y6A2 500 aa15.35■□□□□ 0.05
LSM8-201ENST00000249299 E7EWF7 191 aa15.34■□□□□ 0.05
LSM8-201ENST00000249299 MYO1BO43795 1136 aa15.34■□□□□ 0.05
LSM8-201ENST00000249299 ENTPD3O75355 529 aa15.34■□□□□ 0.05
LSM8-201ENST00000249299 WDHD1O75717 1129 aaPredicted RBP15.34■□□□□ 0.05
LSM8-201ENST00000249299 RBM5P52756 815 aaKnown RBP eCLIP15.34■□□□□ 0.05
LSM8-201ENST00000249299 PPARAQ07869 468 aa15.34■□□□□ 0.05
LSM8-201ENST00000249299 C9orf131Q5VYM1 1079 aa15.34■□□□□ 0.05
LSM8-201ENST00000249299 DPY19L2Q6NUT2 758 aa15.34■□□□□ 0.05
LSM8-201ENST00000249299 CTR9Q6PD62 1173 aa15.34■□□□□ 0.05
LSM8-201ENST00000249299 BLOC1S2Q6QNY1 142 aa15.34■□□□□ 0.05
LSM8-201ENST00000249299 RUFY3Q7L099 469 aa15.34■□□□□ 0.05
LSM8-201ENST00000249299 MCM9Q9NXL9 1143 aa15.34■□□□□ 0.05
LSM8-201ENST00000249299 TMOD2Q9NZR1 351 aa15.34■□□□□ 0.05
LSM8-201ENST00000249299 SRCAPQ6ZRS2 3230 aa15.34■□□□□ 0.05
LSM8-201ENST00000249299 FLT1P17948 1338 aa15.33■□□□□ 0.05
LSM8-201ENST00000249299 COL2A1P02458 1487 aaPredicted RBP15.33■□□□□ 0.04
LSM8-201ENST00000249299 ROBO3Q96MS0 1386 aa15.33■□□□□ 0.04
LSM8-201ENST00000249299 USP17L12C9JPN9 530 aa15.33■□□□□ 0.04
LSM8-201ENST00000249299 USP17L21D6R901 530 aa15.33■□□□□ 0.04
LSM8-201ENST00000249299 H7C1D1 291 aa15.33■□□□□ 0.04
LSM8-201ENST00000249299 GMPSP49915 693 aaPredicted RBP15.33■□□□□ 0.04
LSM8-201ENST00000249299 ANKRD1Q15327 319 aa15.33■□□□□ 0.04
LSM8-201ENST00000249299 AKNAD1Q5T1N1 836 aa15.33■□□□□ 0.04
LSM8-201ENST00000249299 C12orf60Q5U649 245 aa15.33■□□□□ 0.04
LSM8-201ENST00000249299 DHX32Q7L7V1 743 aaKnown RBP15.33■□□□□ 0.04
LSM8-201ENST00000249299 TTC6Q86TZ1 520 aa15.33■□□□□ 0.04
LSM8-201ENST00000249299 NCOA7Q8NI08 942 aa15.33■□□□□ 0.04
LSM8-201ENST00000249299 JAKMIP1Q96N16 626 aaKnown RBP15.33■□□□□ 0.04
LSM8-201ENST00000249299 KRT23Q9C075 422 aa15.33■□□□□ 0.04
LSM8-201ENST00000249299 MYOZ2Q9NPC6 264 aa15.33■□□□□ 0.04
LSM8-201ENST00000249299 MYH2Q9UKX2 1941 aa15.33■□□□□ 0.04
LSM8-201ENST00000249299 C19orf67A6NJJ6 358 aa15.32■□□□□ 0.04
LSM8-201ENST00000249299 CASTP20810 708 aaKnown RBP15.32■□□□□ 0.04
LSM8-201ENST00000249299 NEK4P51957 841 aa15.32■□□□□ 0.04
LSM8-201ENST00000249299 MFSD6Q6ZSS7 791 aa15.32■□□□□ 0.04
LSM8-201ENST00000249299 FAM83AQ86UY5 434 aa15.32■□□□□ 0.04
LSM8-201ENST00000249299 PRMT6Q96LA8 375 aaPredicted RBP15.32■□□□□ 0.04
LSM8-201ENST00000249299 GPRC5DQ9NZD1 345 aa15.32■□□□□ 0.04
LSM8-201ENST00000249299 CNOT7Q9UIV1 285 aaKnown RBP15.32■□□□□ 0.04
LSM8-201ENST00000249299 DICER1Q9UPY3 1922 aaKnown RBP15.32■□□□□ 0.04
LSM8-201ENST00000249299 ZNF541Q9H0D2 1346 aa15.32■□□□□ 0.04
LSM8-201ENST00000249299 ORC4O43929 436 aa15.31■□□□□ 0.04
LSM8-201ENST00000249299 RPS6KB1P23443 525 aa15.31■□□□□ 0.04
LSM8-201ENST00000249299 PDE4BQ07343 736 aa15.31■□□□□ 0.04
LSM8-201ENST00000249299 ADCK5Q3MIX3 580 aa15.31■□□□□ 0.04
LSM8-201ENST00000249299 RALYLQ86SE5 291 aaKnown RBP15.31■□□□□ 0.04
LSM8-201ENST00000249299 MICALL2Q8IY33 904 aa15.31■□□□□ 0.04
LSM8-201ENST00000249299 L3MBTL3Q96JM7 780 aaPredicted RBP15.31■□□□□ 0.04
LSM8-201ENST00000249299 TTC14Q96N46 770 aa15.31■□□□□ 0.04
LSM8-201ENST00000249299 OSBPL5Q9H0X9 879 aaPredicted RBP15.31■□□□□ 0.04
LSM8-201ENST00000249299 EHD4Q9H223 541 aa15.31■□□□□ 0.04
LSM8-201ENST00000249299 GJA3Q9Y6H8 435 aa15.31■□□□□ 0.04
LSM8-201ENST00000249299 ATRNL1Q5VV63 1379 aa15.3■□□□□ 0.04
LSM8-201ENST00000249299 WNT10BO00744 389 aa15.3■□□□□ 0.04
LSM8-201ENST00000249299 POLR3DP05423 398 aaPredicted RBP15.3■□□□□ 0.04
LSM8-201ENST00000249299 MCM5P33992 734 aa15.3■□□□□ 0.04
LSM8-201ENST00000249299 TNFAIP1Q13829 316 aa15.3■□□□□ 0.04
LSM8-201ENST00000249299 STOX1Q6ZVD7 989 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms