RNA–Protein interactions for RNA: ENST00000248089.7

HCFC1R1-201, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene HCFC1R1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-201ENST00000248089 ALDH1A1P00352 501 aa25.86■■□□□ 1.73
HCFC1R1-201ENST00000248089 NAA16Q6N069 864 aaPredicted RBP25.86■■□□□ 1.73
HCFC1R1-201ENST00000248089 NOL10Q9BSC4 688 aaKnown RBP25.86■■□□□ 1.73
HCFC1R1-201ENST00000248089 MCOLN1Q9GZU1 580 aa25.86■■□□□ 1.73
HCFC1R1-201ENST00000248089 INPP5BP32019 993 aa25.85■■□□□ 1.73
HCFC1R1-201ENST00000248089 RHBDL3P58872 404 aa25.85■■□□□ 1.73
HCFC1R1-201ENST00000248089 KIF1BPQ96EK5 621 aa25.85■■□□□ 1.73
HCFC1R1-201ENST00000248089 FOCADQ5VW36 1801 aa25.84■■□□□ 1.73
HCFC1R1-201ENST00000248089 SPDYE5A6NIY4 337 aa25.84■■□□□ 1.73
HCFC1R1-201ENST00000248089 ZNF296Q8WUU4 475 aaPredicted RBP25.84■■□□□ 1.73
HCFC1R1-201ENST00000248089 PIH1D3Q9NQM4 214 aaKnown RBP25.84■■□□□ 1.73
HCFC1R1-201ENST00000248089 NDUFB9Q9Y6M9 179 aa25.84■■□□□ 1.73
HCFC1R1-201ENST00000248089 GTF2A2P52657 109 aa25.83■■□□□ 1.73
HCFC1R1-201ENST00000248089 OTUD7BQ6GQQ9 843 aa25.83■■□□□ 1.73
HCFC1R1-201ENST00000248089 SH3BP5LQ7L8J4 393 aa25.83■■□□□ 1.73
HCFC1R1-201ENST00000248089 ERO1BQ86YB8 467 aa25.83■■□□□ 1.73
HCFC1R1-201ENST00000248089 CLASRPQ8N2M8 674 aaKnown RBP25.83■■□□□ 1.73
HCFC1R1-201ENST00000248089 R3HDMLQ9H3Y0 253 aa25.83■■□□□ 1.73
HCFC1R1-201ENST00000248089 DOCK1Q14185 1865 aa25.83■■□□□ 1.72
HCFC1R1-201ENST00000248089 CCL15-CCL14A0A0B4J2E2 113 aa25.82■■□□□ 1.72
HCFC1R1-201ENST00000248089 DDTLA6NHG4 134 aaPredicted RBP25.82■■□□□ 1.72
HCFC1R1-201ENST00000248089 GPR25O00155 361 aa25.82■■□□□ 1.72
HCFC1R1-201ENST00000248089 CCL15Q16663 113 aa25.82■■□□□ 1.72
HCFC1R1-201ENST00000248089 TEX11Q8IYF3 940 aa25.82■■□□□ 1.72
HCFC1R1-201ENST00000248089 MS4A4AQ96JQ5 239 aa25.82■■□□□ 1.72
HCFC1R1-201ENST00000248089 AATFQ9NY61 560 aaKnown RBP eCLIP25.82■■□□□ 1.72
HCFC1R1-201ENST00000248089 ATRNL1Q5VV63 1379 aa25.82■■□□□ 1.72
HCFC1R1-201ENST00000248089 IDH1O75874 414 aaKnown RBP25.81■■□□□ 1.72
HCFC1R1-201ENST00000248089 SH3RF3Q8TEJ3 882 aaPredicted RBP25.81■■□□□ 1.72
HCFC1R1-201ENST00000248089 PTPN18Q99952 460 aa25.81■■□□□ 1.72
HCFC1R1-201ENST00000248089 CFHR5Q9BXR6 569 aa25.81■■□□□ 1.72
HCFC1R1-201ENST00000248089 ZNF112Q9UJU3 913 aa25.81■■□□□ 1.72
HCFC1R1-201ENST00000248089 TESPA1A2RU30 521 aaPredicted RBP25.8■■□□□ 1.72
HCFC1R1-201ENST00000248089 RAB11FIP3O75154 756 aa25.8■■□□□ 1.72
HCFC1R1-201ENST00000248089 BAG3O95817 575 aa25.8■■□□□ 1.72
HCFC1R1-201ENST00000248089 IFIT2P09913 472 aaKnown RBP25.8■■□□□ 1.72
HCFC1R1-201ENST00000248089 ADGRA1Q86SQ6 560 aa25.8■■□□□ 1.72
HCFC1R1-201ENST00000248089 BRI3BPQ8WY22 251 aa25.8■■□□□ 1.72
HCFC1R1-201ENST00000248089 MAP4K4O95819 1239 aaPredicted RBP25.79■■□□□ 1.72
HCFC1R1-201ENST00000248089 PPIL2Q13356 520 aa25.79■■□□□ 1.72
HCFC1R1-201ENST00000248089 CTU1Q7Z7A3 348 aaKnown RBP25.79■■□□□ 1.72
HCFC1R1-201ENST00000248089 ATAD5Q96QE3 1844 aa25.79■■□□□ 1.72
HCFC1R1-201ENST00000248089 IRF6O14896 467 aa25.78■■□□□ 1.72
HCFC1R1-201ENST00000248089 SLURP2P0DP57 97 aa25.78■■□□□ 1.72
HCFC1R1-201ENST00000248089 CRHR2Q13324 411 aa25.78■■□□□ 1.72
HCFC1R1-201ENST00000248089 ANTXR1Q9H6X2 564 aa25.78■■□□□ 1.72
HCFC1R1-201ENST00000248089 CCDC85CA6NKD9 419 aa25.77■■□□□ 1.72
HCFC1R1-201ENST00000248089 FKTNO75072 461 aa25.77■■□□□ 1.72
HCFC1R1-201ENST00000248089 PLCG2P16885 1265 aa25.77■■□□□ 1.72
HCFC1R1-201ENST00000248089 CYP7A1P22680 504 aa25.77■■□□□ 1.72
HCFC1R1-201ENST00000248089 RRP1P56182 461 aaKnown RBP25.77■■□□□ 1.72
HCFC1R1-201ENST00000248089 PPATQ06203 517 aa25.77■■□□□ 1.72
HCFC1R1-201ENST00000248089 SNAPC2Q13487 334 aa25.77■■□□□ 1.72
HCFC1R1-201ENST00000248089 NOM1Q5C9Z4 860 aaKnown RBP25.77■■□□□ 1.72
HCFC1R1-201ENST00000248089 NOL9Q5SY16 702 aaKnown RBP25.77■■□□□ 1.72
HCFC1R1-201ENST00000248089 OSBPL5Q9H0X9 879 aaPredicted RBP25.77■■□□□ 1.72
HCFC1R1-201ENST00000248089 COL2A1P02458 1487 aaPredicted RBP25.77■■□□□ 1.72
HCFC1R1-201ENST00000248089 NPM3O75607 178 aaKnown RBP25.76■■□□□ 1.71
HCFC1R1-201ENST00000248089 CETPP11597 493 aa25.76■■□□□ 1.71
HCFC1R1-201ENST00000248089 MAGEB6Q8N7X4 407 aa25.76■■□□□ 1.71
HCFC1R1-201ENST00000248089 SIPA1L1O43166 1804 aa25.76■■□□□ 1.71
HCFC1R1-201ENST00000248089 PHF20L1A8MW92 1017 aa25.75■■□□□ 1.71
HCFC1R1-201ENST00000248089 FAM43AQ8N2R8 423 aa25.75■■□□□ 1.71
HCFC1R1-201ENST00000248089 DNAJC2Q99543 621 aaKnown RBP25.75■■□□□ 1.71
HCFC1R1-201ENST00000248089 PICK1Q9NRD5 415 aa25.75■■□□□ 1.71
HCFC1R1-201ENST00000248089 MYH1P12882 1939 aa25.75■■□□□ 1.71
HCFC1R1-201ENST00000248089 PHIPQ8WWQ0 1821 aa25.74■■□□□ 1.71
HCFC1R1-201ENST00000248089 FAM196BA6NMK8 535 aa25.74■■□□□ 1.71
HCFC1R1-201ENST00000248089 IGSF3O75054 1194 aa25.74■■□□□ 1.71
HCFC1R1-201ENST00000248089 MAP3K12Q12852 859 aa25.74■■□□□ 1.71
HCFC1R1-201ENST00000248089 TAF1CQ15572 869 aaPredicted RBP25.74■■□□□ 1.71
HCFC1R1-201ENST00000248089 MAPKAPK5Q8IW41 473 aa25.74■■□□□ 1.71
HCFC1R1-201ENST00000248089 SCYL3Q8IZE3 742 aa25.74■■□□□ 1.71
HCFC1R1-201ENST00000248089 TGFBRAP1Q8WUH2 860 aa25.74■■□□□ 1.71
HCFC1R1-201ENST00000248089 PTPRFP10586 1907 aa25.73■■□□□ 1.71
HCFC1R1-201ENST00000248089 PPP4CP60510 307 aa25.73■■□□□ 1.71
HCFC1R1-201ENST00000248089 DYNLL1P63167 89 aaKnown RBP25.73■■□□□ 1.71
HCFC1R1-201ENST00000248089 MIGA1Q8NAN2 632 aa25.73■■□□□ 1.71
HCFC1R1-201ENST00000248089 LRRCC1Q9C099 1032 aa25.73■■□□□ 1.71
HCFC1R1-201ENST00000248089 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.73■■□□□ 1.71
HCFC1R1-201ENST00000248089 FLT1P17948 1338 aa25.72■■□□□ 1.71
HCFC1R1-201ENST00000248089 MYH7P12883 1935 aa25.72■■□□□ 1.71
HCFC1R1-201ENST00000248089 BTBD19C9JJ37 291 aa25.71■■□□□ 1.71
HCFC1R1-201ENST00000248089 GOLIM4O00461 696 aa25.71■■□□□ 1.71
HCFC1R1-201ENST00000248089 SMARCA5O60264 1052 aaPredicted RBP25.71■■□□□ 1.71
HCFC1R1-201ENST00000248089 MAP3K10Q02779 954 aa25.71■■□□□ 1.71
HCFC1R1-201ENST00000248089 TTF1Q15361 905 aaPredicted RBP25.71■■□□□ 1.71
HCFC1R1-201ENST00000248089 ZFYVE28Q9HCC9 887 aa25.71■■□□□ 1.71
HCFC1R1-201ENST00000248089 NAV1Q8NEY1 1877 aa25.7■■□□□ 1.71
HCFC1R1-201ENST00000248089 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.7■■□□□ 1.7
HCFC1R1-201ENST00000248089 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.7■■□□□ 1.7
HCFC1R1-201ENST00000248089 KCNH4Q9UQ05 1017 aa25.7■■□□□ 1.7
HCFC1R1-201ENST00000248089 TBC1D12O60347 775 aa25.69■■□□□ 1.7
HCFC1R1-201ENST00000248089 CTNND1O60716 968 aaKnown RBP25.69■■□□□ 1.7
HCFC1R1-201ENST00000248089 PTPRAP18433 802 aa25.69■■□□□ 1.7
HCFC1R1-201ENST00000248089 SAP30BPQ9UHR5 308 aaKnown RBP25.69■■□□□ 1.7
HCFC1R1-201ENST00000248089 ZHX2Q9Y6X8 837 aa25.69■■□□□ 1.7
HCFC1R1-201ENST00000248089 SLC4A8Q2Y0W8 1093 aa25.68■■□□□ 1.7
HCFC1R1-201ENST00000248089 EDC3Q96F86 508 aaKnown RBP25.68■■□□□ 1.7
HCFC1R1-201ENST00000248089 DHX36Q9H2U1 1008 aaKnown RBP25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms