RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 FOXN1O15353 648 aa14.49□□□□□ -0.09
RAB3IP-201ENST00000247833 STX17P56962 302 aa14.49□□□□□ -0.09
RAB3IP-201ENST00000247833 CCZ1BP86790 482 aa14.49□□□□□ -0.09
RAB3IP-201ENST00000247833 CCZ1P86791 482 aaPredicted RBP14.49□□□□□ -0.09
RAB3IP-201ENST00000247833 KRI1Q8N9T8 703 aaKnown RBP14.49□□□□□ -0.09
RAB3IP-201ENST00000247833 ZBTB9Q96C00 473 aa14.49□□□□□ -0.09
RAB3IP-201ENST00000247833 CSF1RP07333 972 aa14.49□□□□□ -0.09
RAB3IP-201ENST00000247833 GUCY1A2P33402 732 aa14.49□□□□□ -0.09
RAB3IP-201ENST00000247833 AKNAD1Q5T1N1 836 aa14.49□□□□□ -0.09
RAB3IP-201ENST00000247833 PATL2C9JE40 543 aaKnown RBP14.48□□□□□ -0.09
RAB3IP-201ENST00000247833 SLU7O95391 586 aaKnown RBP14.48□□□□□ -0.09
RAB3IP-201ENST00000247833 LCORLQ8N3X6 602 aa14.48□□□□□ -0.09
RAB3IP-201ENST00000247833 DHX58Q96C10 678 aa14.48□□□□□ -0.09
RAB3IP-201ENST00000247833 CCDC34Q96HJ3 373 aa14.48□□□□□ -0.09
RAB3IP-201ENST00000247833 KRT23Q9C075 422 aa14.48□□□□□ -0.09
RAB3IP-201ENST00000247833 AXDND1Q5T1B0 1012 aaPredicted RBP14.48□□□□□ -0.09
RAB3IP-201ENST00000247833 SHC4Q6S5L8 630 aa14.48□□□□□ -0.09
RAB3IP-201ENST00000247833 SMARCE1Q969G3 411 aa14.48□□□□□ -0.09
RAB3IP-201ENST00000247833 NUTM2BA6NNL0 878 aaPredicted RBP14.47□□□□□ -0.09
RAB3IP-201ENST00000247833 NUTM2EB1AL46 878 aaPredicted RBP14.47□□□□□ -0.09
RAB3IP-201ENST00000247833 XBP1P17861 261 aa14.47□□□□□ -0.09
RAB3IP-201ENST00000247833 TRIM28Q13263 835 aaKnown RBP14.47□□□□□ -0.09
RAB3IP-201ENST00000247833 NUTM2AQ8IVF1 878 aaPredicted RBP14.47□□□□□ -0.09
RAB3IP-201ENST00000247833 STAMQ92783 540 aa14.47□□□□□ -0.09
RAB3IP-201ENST00000247833 DPF2Q92785 391 aa14.47□□□□□ -0.09
RAB3IP-201ENST00000247833 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.47□□□□□ -0.09
RAB3IP-201ENST00000247833 ZNF335Q9H4Z2 1342 aaPredicted RBP14.47□□□□□ -0.09
RAB3IP-201ENST00000247833 ARMCX5Q6P1M9 558 aa14.47□□□□□ -0.09
RAB3IP-201ENST00000247833 NOSTRINQ8IVI9 506 aa14.47□□□□□ -0.09
RAB3IP-201ENST00000247833 CNNM2Q9H8M5 875 aa14.47□□□□□ -0.09
RAB3IP-201ENST00000247833 SERTAD1Q9UHV2 236 aa14.47□□□□□ -0.09
RAB3IP-201ENST00000247833 RBM6P78332 1123 aaKnown RBP14.47□□□□□ -0.09
RAB3IP-201ENST00000247833 SMAP1Q8IYB5 467 aaPredicted RBP14.47□□□□□ -0.09
RAB3IP-201ENST00000247833 NBPF3Q9H094 633 aa14.47□□□□□ -0.09
RAB3IP-201ENST00000247833 LY9Q9HBG7 655 aa14.47□□□□□ -0.09
RAB3IP-201ENST00000247833 VPS54Q9P1Q0 977 aa14.47□□□□□ -0.09
RAB3IP-201ENST00000247833 UBN2Q6ZU65 1347 aa14.47□□□□□ -0.09
RAB3IP-201ENST00000247833 CCDC196A0A1B0GTZ2 297 aa14.46□□□□□ -0.09
RAB3IP-201ENST00000247833 TMEM232C9JQI7 657 aa14.46□□□□□ -0.09
RAB3IP-201ENST00000247833 GYG1P46976 350 aa14.46□□□□□ -0.09
RAB3IP-201ENST00000247833 ERCC6LQ2NKX8 1250 aa14.46□□□□□ -0.09
RAB3IP-201ENST00000247833 CCDC152Q4G0S7 254 aa14.46□□□□□ -0.09
RAB3IP-201ENST00000247833 CCDC24Q8N4L8 307 aa14.46□□□□□ -0.09
RAB3IP-201ENST00000247833 KIF2AO00139 706 aaPredicted RBP14.46□□□□□ -0.09
RAB3IP-201ENST00000247833 CYP19A1P11511 503 aaPredicted RBP14.46□□□□□ -0.09
RAB3IP-201ENST00000247833 SUSD4Q5VX71 490 aa14.46□□□□□ -0.09
RAB3IP-201ENST00000247833 UBXN4Q92575 508 aa14.46□□□□□ -0.09
RAB3IP-201ENST00000247833 PPP1R13BQ96KQ4 1090 aa14.46□□□□□ -0.09
RAB3IP-201ENST00000247833 EPB41L4AQ9HCS5 686 aaPredicted RBP14.46□□□□□ -0.09
RAB3IP-201ENST00000247833 NFE2L3Q9Y4A8 694 aa14.46□□□□□ -0.09
RAB3IP-201ENST00000247833 CRYBG1Q9Y4K1 1723 aa14.46□□□□□ -0.09
RAB3IP-201ENST00000247833 CYP2D7A0A087X1C5 515 aa14.46□□□□□ -0.1
RAB3IP-201ENST00000247833 CUTAO60888 179 aa14.46□□□□□ -0.1
RAB3IP-201ENST00000247833 KRBA2Q6ZNG9 492 aa14.46□□□□□ -0.1
RAB3IP-201ENST00000247833 ZSWIM4Q9H7M6 989 aa14.46□□□□□ -0.1
RAB3IP-201ENST00000247833 IMPACTQ9P2X3 320 aa14.46□□□□□ -0.1
RAB3IP-201ENST00000247833 NKX1-1Q15270 411 aaPredicted RBP14.45□□□□□ -0.1
RAB3IP-201ENST00000247833 NBPF11Q86T75 865 aa14.45□□□□□ -0.1
RAB3IP-201ENST00000247833 ADKP55263 362 aaKnown RBP14.45□□□□□ -0.1
RAB3IP-201ENST00000247833 KCNQ4P56696 695 aa14.45□□□□□ -0.1
RAB3IP-201ENST00000247833 GRIN1Q05586 938 aa14.45□□□□□ -0.1
RAB3IP-201ENST00000247833 RNF41Q9H4P4 317 aaPredicted RBP14.45□□□□□ -0.1
RAB3IP-201ENST00000247833 GNL3LQ9NVN8 582 aaKnown RBP14.45□□□□□ -0.1
RAB3IP-201ENST00000247833 PCDHB6Q9Y5E3 794 aa14.45□□□□□ -0.1
RAB3IP-201ENST00000247833 CPDO75976 1380 aa14.45□□□□□ -0.1
RAB3IP-201ENST00000247833 COBLO75128 1261 aa14.45□□□□□ -0.1
RAB3IP-201ENST00000247833 GNG11P61952 73 aa14.45□□□□□ -0.1
RAB3IP-201ENST00000247833 ZNF654Q8IZM8 581 aa14.45□□□□□ -0.1
RAB3IP-201ENST00000247833 IGDCC4Q8TDY8 1250 aa14.45□□□□□ -0.1
RAB3IP-201ENST00000247833 MRC1P22897 1456 aa14.45□□□□□ -0.1
RAB3IP-201ENST00000247833 EVCP57679 992 aa14.44□□□□□ -0.1
RAB3IP-201ENST00000247833 KARSQ15046 597 aaKnown RBP14.44□□□□□ -0.1
RAB3IP-201ENST00000247833 E4F1Q66K89 784 aaPredicted RBP14.44□□□□□ -0.1
RAB3IP-201ENST00000247833 V9GY48 417 aaPredicted RBP14.44□□□□□ -0.1
RAB3IP-201ENST00000247833 MROH5Q6ZUA9 1318 aa14.44□□□□□ -0.1
RAB3IP-201ENST00000247833 MAGEB6P1A0A0J9YX57 407 aa14.44□□□□□ -0.1
RAB3IP-201ENST00000247833 CTIFO43310 598 aaKnown RBP14.44□□□□□ -0.1
RAB3IP-201ENST00000247833 POSTNQ15063 836 aa14.44□□□□□ -0.1
RAB3IP-201ENST00000247833 OXER1Q8TDS5 423 aa14.44□□□□□ -0.1
RAB3IP-201ENST00000247833 ESR2Q92731 530 aa14.44□□□□□ -0.1
RAB3IP-201ENST00000247833 BRMS1Q9HCU9 246 aa14.44□□□□□ -0.1
RAB3IP-201ENST00000247833 CAMTA1Q9Y6Y1 1673 aa14.44□□□□□ -0.1
RAB3IP-201ENST00000247833 CASP1P29466 404 aa14.44□□□□□ -0.1
RAB3IP-201ENST00000247833 ZNF174Q15697 407 aa14.44□□□□□ -0.1
RAB3IP-201ENST00000247833 ARHGAP29Q52LW3 1261 aa14.44□□□□□ -0.1
RAB3IP-201ENST00000247833 IFIT1BQ5T764 474 aaKnown RBP14.44□□□□□ -0.1
RAB3IP-201ENST00000247833 ERO1AQ96HE7 468 aa14.44□□□□□ -0.1
RAB3IP-201ENST00000247833 PLA2G12BQ9BX93 195 aa14.44□□□□□ -0.1
RAB3IP-201ENST00000247833 SCN11AQ9UI33 1791 aa14.43□□□□□ -0.1
RAB3IP-201ENST00000247833 GSG1L2A8MUP6 293 aa14.43□□□□□ -0.1
RAB3IP-201ENST00000247833 METTL16Q86W50 562 aaKnown RBP14.43□□□□□ -0.1
RAB3IP-201ENST00000247833 ZNF397Q8NF99 534 aaPredicted RBP14.43□□□□□ -0.1
RAB3IP-201ENST00000247833 ANKRD7Q92527 254 aa14.43□□□□□ -0.1
RAB3IP-201ENST00000247833 SLC4A9Q96Q91 983 aa14.43□□□□□ -0.1
RAB3IP-201ENST00000247833 BAZ2BQ9UIF8 2168 aaKnown RBP14.43□□□□□ -0.1
RAB3IP-201ENST00000247833 CATIPQ7Z7H3 387 aa14.43□□□□□ -0.1
RAB3IP-201ENST00000247833 IQCA1Q86XH1 822 aa14.43□□□□□ -0.1
RAB3IP-201ENST00000247833 FANCBQ8NB91 859 aa14.43□□□□□ -0.1
RAB3IP-201ENST00000247833 DACH1Q9UI36 760 aa14.43□□□□□ -0.1
RAB3IP-201ENST00000247833 USP54Q70EL1 1684 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms