RNA–Protein interactions for RNA: ENST00000246529.3

LRFN3-201, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN3, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-201ENST00000246529 PFKFB1P16118 471 aa20.15■□□□□ 0.82
LRFN3-201ENST00000246529 LIFRP42702 1097 aa20.15■□□□□ 0.82
LRFN3-201ENST00000246529 CDC5LQ99459 802 aaKnown RBP20.15■□□□□ 0.82
LRFN3-201ENST00000246529 NACAP1Q9BZK3 213 aa20.15■□□□□ 0.82
LRFN3-201ENST00000246529 RAI14Q9P0K7 980 aa20.15■□□□□ 0.82
LRFN3-201ENST00000246529 BCL9LQ86UU0 1499 aa20.15■□□□□ 0.82
LRFN3-201ENST00000246529 PNPLA7Q6ZV29 1317 aa20.15■□□□□ 0.82
LRFN3-201ENST00000246529 ZNF202O95125 648 aa20.15■□□□□ 0.82
LRFN3-201ENST00000246529 HSP90AA2PQ14568 343 aaPredicted RBP20.15■□□□□ 0.82
LRFN3-201ENST00000246529 SLC39A14Q15043 492 aa20.15■□□□□ 0.82
LRFN3-201ENST00000246529 DPCR1Q3MIW9 517 aa20.15■□□□□ 0.82
LRFN3-201ENST00000246529 ANKRD18AQ8IVF6 992 aa20.15■□□□□ 0.82
LRFN3-201ENST00000246529 STAG1Q8WVM7 1258 aa20.15■□□□□ 0.82
LRFN3-201ENST00000246529 KRT23Q9C075 422 aa20.15■□□□□ 0.82
LRFN3-201ENST00000246529 CNNM2Q9H8M5 875 aa20.15■□□□□ 0.82
LRFN3-201ENST00000246529 DOCK2Q92608 1830 aa20.15■□□□□ 0.82
LRFN3-201ENST00000246529 MINDY4BA8MYZ0 360 aa20.14■□□□□ 0.82
LRFN3-201ENST00000246529 KIAA1468Q9P260 1216 aa20.14■□□□□ 0.82
LRFN3-201ENST00000246529 COL1A1P02452 1464 aaPredicted RBP20.14■□□□□ 0.81
LRFN3-201ENST00000246529 ARID5BQ14865 1188 aa20.14■□□□□ 0.81
LRFN3-201ENST00000246529 BARGINQ6ZT62 677 aa20.14■□□□□ 0.81
LRFN3-201ENST00000246529 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.14■□□□□ 0.81
LRFN3-201ENST00000246529 CEP57L1Q8IYX8 460 aa20.14■□□□□ 0.81
LRFN3-201ENST00000246529 CCDC24Q8N4L8 307 aa20.14■□□□□ 0.81
LRFN3-201ENST00000246529 RREB1Q92766 1687 aa20.14■□□□□ 0.81
LRFN3-201ENST00000246529 GNAT2P19087 354 aa20.13■□□□□ 0.81
LRFN3-201ENST00000246529 SSRP1Q08945 709 aaKnown RBP20.13■□□□□ 0.81
LRFN3-201ENST00000246529 CELF1Q92879 486 aaKnown RBP20.13■□□□□ 0.81
LRFN3-201ENST00000246529 SMARCC1Q92922 1105 aaPredicted RBP20.13■□□□□ 0.81
LRFN3-201ENST00000246529 FAM13BQ9NYF5 915 aa20.13■□□□□ 0.81
LRFN3-201ENST00000246529 CMA1P23946 247 aa20.13■□□□□ 0.81
LRFN3-201ENST00000246529 TRIM29Q14134 588 aa20.13■□□□□ 0.81
LRFN3-201ENST00000246529 WTAPQ15007 396 aa20.13■□□□□ 0.81
LRFN3-201ENST00000246529 ISM2Q6H9L7 571 aa20.13■□□□□ 0.81
LRFN3-201ENST00000246529 SARM1Q6SZW1 724 aa20.13■□□□□ 0.81
LRFN3-201ENST00000246529 CACTINQ8WUQ7 758 aaKnown RBP20.13■□□□□ 0.81
LRFN3-201ENST00000246529 TSC1Q92574 1164 aa20.13■□□□□ 0.81
LRFN3-201ENST00000246529 CLIC6Q96NY7 704 aa20.13■□□□□ 0.81
LRFN3-201ENST00000246529 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.13■□□□□ 0.81
LRFN3-201ENST00000246529 KCNJ14Q9UNX9 436 aa20.13■□□□□ 0.81
LRFN3-201ENST00000246529 KLRK1P26718 216 aa20.12■□□□□ 0.81
LRFN3-201ENST00000246529 PPARAQ07869 468 aa20.12■□□□□ 0.81
LRFN3-201ENST00000246529 PTPAQ15257 358 aa20.12■□□□□ 0.81
LRFN3-201ENST00000246529 TBC1D9BQ66K14 1250 aa20.12■□□□□ 0.81
LRFN3-201ENST00000246529 MAP3K14Q99558 947 aa20.12■□□□□ 0.81
LRFN3-201ENST00000246529 CYP2D7A0A087X1C5 515 aa20.12■□□□□ 0.81
LRFN3-201ENST00000246529 FMNL1O95466 1100 aaPredicted RBP20.12■□□□□ 0.81
LRFN3-201ENST00000246529 DYNLL1P63167 89 aaKnown RBP20.12■□□□□ 0.81
LRFN3-201ENST00000246529 SHC4Q6S5L8 630 aa20.12■□□□□ 0.81
LRFN3-201ENST00000246529 MINPP1Q9UNW1 487 aa20.12■□□□□ 0.81
LRFN3-201ENST00000246529 ZNF804BA4D1E1 1349 aa20.12■□□□□ 0.81
LRFN3-201ENST00000246529 MAGEB6P1A0A0J9YX57 407 aa20.11■□□□□ 0.81
LRFN3-201ENST00000246529 SLC3A2P08195 630 aaKnown RBP20.11■□□□□ 0.81
LRFN3-201ENST00000246529 GTF2E1P29083 439 aaPredicted RBP20.11■□□□□ 0.81
LRFN3-201ENST00000246529 NUP133Q8WUM0 1156 aa20.11■□□□□ 0.81
LRFN3-201ENST00000246529 TAF1P21675 1872 aa20.11■□□□□ 0.81
LRFN3-201ENST00000246529 U2AF2P26368 475 aaKnown RBP eCLIP20.11■□□□□ 0.81
LRFN3-201ENST00000246529 RTN1Q16799 776 aa20.11■□□□□ 0.81
LRFN3-201ENST00000246529 BTBD18B2RXH4 712 aa20.1■□□□□ 0.81
LRFN3-201ENST00000246529 IFNAR1P17181 557 aa20.1■□□□□ 0.81
LRFN3-201ENST00000246529 CLEC4GQ6UXB4 293 aa20.1■□□□□ 0.81
LRFN3-201ENST00000246529 SRP68Q9UHB9 627 aaKnown RBP20.1■□□□□ 0.81
LRFN3-201ENST00000246529 TIAM2Q8IVF5 1701 aa20.1■□□□□ 0.81
LRFN3-201ENST00000246529 RRP9O43818 475 aaKnown RBP20.1■□□□□ 0.81
LRFN3-201ENST00000246529 CDC25BP30305 580 aa20.1■□□□□ 0.81
LRFN3-201ENST00000246529 SF3B3Q15393 1217 aaKnown RBP20.1■□□□□ 0.81
LRFN3-201ENST00000246529 ZNF384Q8TF68 577 aa20.1■□□□□ 0.81
LRFN3-201ENST00000246529 BCL2L12Q9HB09 334 aa20.1■□□□□ 0.81
LRFN3-201ENST00000246529 BSDC1Q9NW68 430 aaPredicted RBP20.1■□□□□ 0.81
LRFN3-201ENST00000246529 SART3Q15020 963 aaKnown RBP20.09■□□□□ 0.81
LRFN3-201ENST00000246529 MYRIPQ8NFW9 859 aa20.09■□□□□ 0.81
LRFN3-201ENST00000246529 FAM84BQ96KN1 310 aaPredicted RBP20.09■□□□□ 0.81
LRFN3-201ENST00000246529 RIOK1Q9BRS2 568 aaKnown RBP20.09■□□□□ 0.81
LRFN3-201ENST00000246529 ERICH2A1L162 156 aa20.09■□□□□ 0.81
LRFN3-201ENST00000246529 SYKP43405 635 aa20.09■□□□□ 0.81
LRFN3-201ENST00000246529 EVX2Q03828 476 aa20.09■□□□□ 0.81
LRFN3-201ENST00000246529 ZRSR1Q15695 479 aaKnown RBP20.09■□□□□ 0.81
LRFN3-201ENST00000246529 ECM29Q5VYK3 1845 aa20.09■□□□□ 0.81
LRFN3-201ENST00000246529 MRFAP1L1Q96HT8 127 aa20.09■□□□□ 0.81
LRFN3-201ENST00000246529 CICQ96RK0 1608 aaPredicted RBP20.09■□□□□ 0.81
LRFN3-201ENST00000246529 NAT10Q9H0A0 1025 aaKnown RBP20.09■□□□□ 0.81
LRFN3-201ENST00000246529 STK36Q9NRP7 1315 aa20.08■□□□□ 0.81
LRFN3-201ENST00000246529 PRDM1O75626 825 aa20.08■□□□□ 0.81
LRFN3-201ENST00000246529 SPECC1Q5M775 1068 aa20.08■□□□□ 0.81
LRFN3-201ENST00000246529 FILIP1Q7Z7B0 1213 aa20.08■□□□□ 0.81
LRFN3-201ENST00000246529 NBPF11Q86T75 865 aa20.08■□□□□ 0.81
LRFN3-201ENST00000246529 GNL3LQ9NVN8 582 aaKnown RBP20.08■□□□□ 0.81
LRFN3-201ENST00000246529 DYNC1I1O14576 645 aa20.08■□□□□ 0.8
LRFN3-201ENST00000246529 UBE4AQ14139 1066 aa20.08■□□□□ 0.8
LRFN3-201ENST00000246529 CAVIN4Q5BKX8 364 aa20.08■□□□□ 0.8
LRFN3-201ENST00000246529 ZNF654Q8IZM8 581 aa20.08■□□□□ 0.8
LRFN3-201ENST00000246529 UBAC1Q9BSL1 405 aa20.08■□□□□ 0.8
LRFN3-201ENST00000246529 LAMB2P55268 1798 aa20.07■□□□□ 0.8
LRFN3-201ENST00000246529 BCORQ6W2J9 1755 aa20.07■□□□□ 0.8
LRFN3-201ENST00000246529 PPP6R2O75170 966 aa20.07■□□□□ 0.8
LRFN3-201ENST00000246529 NOSTRINQ8IVI9 506 aa20.07■□□□□ 0.8
LRFN3-201ENST00000246529 DIS3L2Q8IYB7 885 aaKnown RBP20.07■□□□□ 0.8
LRFN3-201ENST00000246529 HPSEQ9Y251 543 aa20.07■□□□□ 0.8
LRFN3-201ENST00000246529 TNKSO95271 1327 aa20.07■□□□□ 0.8
LRFN3-201ENST00000246529 MMP1P03956 469 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms