RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 GAKO14976 1311 aa22.05■■□□□ 1.12
TNFSF9-201ENST00000245817 SART3Q15020 963 aaKnown RBP22.05■■□□□ 1.12
TNFSF9-201ENST00000245817 CERS5Q8N5B7 392 aa22.05■■□□□ 1.12
TNFSF9-201ENST00000245817 ZNF274Q96GC6 653 aaPredicted RBP22.05■■□□□ 1.12
TNFSF9-201ENST00000245817 BRCA1P38398 1863 aaKnown RBP22.05■■□□□ 1.12
TNFSF9-201ENST00000245817 KDM4AO75164 1064 aa22.04■■□□□ 1.12
TNFSF9-201ENST00000245817 ANTXR2P58335 489 aa22.04■■□□□ 1.12
TNFSF9-201ENST00000245817 SBK1Q52WX2 424 aa22.04■■□□□ 1.12
TNFSF9-201ENST00000245817 TEX11Q8IYF3 940 aa22.04■■□□□ 1.12
TNFSF9-201ENST00000245817 LARGE2Q8N3Y3 721 aa22.04■■□□□ 1.12
TNFSF9-201ENST00000245817 TGFBRAP1Q8WUH2 860 aa22.04■■□□□ 1.12
TNFSF9-201ENST00000245817 SNED1Q8TER0 1413 aa22.04■■□□□ 1.12
TNFSF9-201ENST00000245817 ERICH2A1L162 156 aa22.04■■□□□ 1.12
TNFSF9-201ENST00000245817 CYB5R4Q7L1T6 521 aa22.04■■□□□ 1.12
TNFSF9-201ENST00000245817 ESR2Q92731 530 aa22.04■■□□□ 1.12
TNFSF9-201ENST00000245817 TEKT1Q969V4 418 aa22.04■■□□□ 1.12
TNFSF9-201ENST00000245817 MXD3Q9BW11 206 aa22.04■■□□□ 1.12
TNFSF9-201ENST00000245817 INCENPQ9NQS7 918 aa22.04■■□□□ 1.12
TNFSF9-201ENST00000245817 ANGEL1Q9UNK9 670 aaKnown RBP22.04■■□□□ 1.12
TNFSF9-201ENST00000245817 UTRNP46939 3433 aa22.03■■□□□ 1.12
TNFSF9-201ENST00000245817 PFKFB2O60825 505 aa22.03■■□□□ 1.12
TNFSF9-201ENST00000245817 GTF3C6Q969F1 213 aa22.03■■□□□ 1.12
TNFSF9-201ENST00000245817 KCNQ5Q9NR82 932 aa22.03■■□□□ 1.12
TNFSF9-201ENST00000245817 ZSWIM5Q9P217 1185 aa22.03■■□□□ 1.12
TNFSF9-201ENST00000245817 DAGLAQ9Y4D2 1042 aa22.03■■□□□ 1.12
TNFSF9-201ENST00000245817 LAMA4Q16363 1823 aa22.03■■□□□ 1.12
TNFSF9-201ENST00000245817 GJB2P29033 226 aa22.02■■□□□ 1.12
TNFSF9-201ENST00000245817 PDE4BQ07343 736 aa22.02■■□□□ 1.12
TNFSF9-201ENST00000245817 HHIPL2Q6UWX4 724 aa22.02■■□□□ 1.12
TNFSF9-201ENST00000245817 TNPO1Q92973 898 aaKnown RBP22.02■■□□□ 1.12
TNFSF9-201ENST00000245817 GBP4Q96PP9 640 aa22.02■■□□□ 1.12
TNFSF9-201ENST00000245817 CYP2D7A0A087X1C5 515 aa22.01■■□□□ 1.11
TNFSF9-201ENST00000245817 IFIT3O14879 490 aaKnown RBP22.01■■□□□ 1.11
TNFSF9-201ENST00000245817 POLR3DP05423 398 aaPredicted RBP22.01■■□□□ 1.11
TNFSF9-201ENST00000245817 SCNN1DP51172 638 aa22.01■■□□□ 1.11
TNFSF9-201ENST00000245817 TMEM67Q5HYA8 995 aa22.01■■□□□ 1.11
TNFSF9-201ENST00000245817 DACT2Q5SW24 774 aa22.01■■□□□ 1.11
TNFSF9-201ENST00000245817 ANP32EQ9BTT0 268 aa22.01■■□□□ 1.11
TNFSF9-201ENST00000245817 ZNF277Q9NRM2 450 aaPredicted RBP22.01■■□□□ 1.11
TNFSF9-201ENST00000245817 KLF18A0A0U1RQI7 1052 aa22.01■■□□□ 1.11
TNFSF9-201ENST00000245817 PDIA3P30101 505 aaKnown RBP22.01■■□□□ 1.11
TNFSF9-201ENST00000245817 EVCP57679 992 aa22.01■■□□□ 1.11
TNFSF9-201ENST00000245817 NFXL1Q6ZNB6 911 aa22.01■■□□□ 1.11
TNFSF9-201ENST00000245817 MAPKAPK5Q8IW41 473 aa22.01■■□□□ 1.11
TNFSF9-201ENST00000245817 UBAC1Q9BSL1 405 aa22.01■■□□□ 1.11
TNFSF9-201ENST00000245817 MTA3Q9BTC8 594 aa22.01■■□□□ 1.11
TNFSF9-201ENST00000245817 MRIQ9BWK5 157 aa22.01■■□□□ 1.11
TNFSF9-201ENST00000245817 MYH2Q9UKX2 1941 aa22■■□□□ 1.11
TNFSF9-201ENST00000245817 SH2B2O14492 632 aaPredicted RBP22■■□□□ 1.11
TNFSF9-201ENST00000245817 USP17L8P0C7I0 530 aa22■■□□□ 1.11
TNFSF9-201ENST00000245817 PDIA4P13667 645 aaKnown RBP22■■□□□ 1.11
TNFSF9-201ENST00000245817 ST3GAL1Q11201 340 aa22■■□□□ 1.11
TNFSF9-201ENST00000245817 KIAA0825Q8IV33 1275 aa22■■□□□ 1.11
TNFSF9-201ENST00000245817 TIAM2Q8IVF5 1701 aa22■■□□□ 1.11
TNFSF9-201ENST00000245817 LLPHQ9BRT6 129 aaKnown RBP22■■□□□ 1.11
TNFSF9-201ENST00000245817 GPHNQ9NQX3 736 aaPredicted RBP22■■□□□ 1.11
TNFSF9-201ENST00000245817 MKRN1Q9UHC7 482 aaKnown RBP22■■□□□ 1.11
TNFSF9-201ENST00000245817 CHD4Q14839 1912 aa22■■□□□ 1.11
TNFSF9-201ENST00000245817 DHX16O60231 1041 aaKnown RBP21.99■■□□□ 1.11
TNFSF9-201ENST00000245817 RANBP6O60518 1105 aaKnown RBP21.99■■□□□ 1.11
TNFSF9-201ENST00000245817 CCT2P78371 535 aaKnown RBP21.99■■□□□ 1.11
TNFSF9-201ENST00000245817 SCRN1Q12765 414 aa21.99■■□□□ 1.11
TNFSF9-201ENST00000245817 C12orf60Q5U649 245 aa21.99■■□□□ 1.11
TNFSF9-201ENST00000245817 SYNE3Q6ZMZ3 975 aa21.99■■□□□ 1.11
TNFSF9-201ENST00000245817 TMTC2Q8N394 836 aa21.99■■□□□ 1.11
TNFSF9-201ENST00000245817 TACC3Q9Y6A5 838 aa21.99■■□□□ 1.11
TNFSF9-201ENST00000245817 CCDC69A6NI79 296 aa21.98■■□□□ 1.11
TNFSF9-201ENST00000245817 PDCP20941 246 aa21.98■■□□□ 1.11
TNFSF9-201ENST00000245817 CRKP46108 304 aa21.98■■□□□ 1.11
TNFSF9-201ENST00000245817 RBM5P52756 815 aaKnown RBP eCLIP21.98■■□□□ 1.11
TNFSF9-201ENST00000245817 RHBDL3P58872 404 aa21.98■■□□□ 1.11
TNFSF9-201ENST00000245817 HDLBPQ00341 1268 aaKnown RBP21.98■■□□□ 1.11
TNFSF9-201ENST00000245817 GPR162Q16538 588 aa21.98■■□□□ 1.11
TNFSF9-201ENST00000245817 NIM1KQ8IY84 436 aa21.98■■□□□ 1.11
TNFSF9-201ENST00000245817 IGDCC4Q8TDY8 1250 aa21.98■■□□□ 1.11
TNFSF9-201ENST00000245817 ZNF287Q9HBT7 754 aa21.98■■□□□ 1.11
TNFSF9-201ENST00000245817 WDR33Q9C0J8 1336 aaKnown RBP21.98■■□□□ 1.11
TNFSF9-201ENST00000245817 GOLGA8BA8MQT2 603 aa21.98■■□□□ 1.11
TNFSF9-201ENST00000245817 FGRP09769 529 aa21.98■■□□□ 1.11
TNFSF9-201ENST00000245817 CYP2D6P10635 497 aa21.98■■□□□ 1.11
TNFSF9-201ENST00000245817 IARSP41252 1262 aaKnown RBP21.98■■□□□ 1.11
TNFSF9-201ENST00000245817 LIFRP42702 1097 aa21.98■■□□□ 1.11
TNFSF9-201ENST00000245817 NT5C2P49902 561 aa21.98■■□□□ 1.11
TNFSF9-201ENST00000245817 PKP1Q13835 747 aa21.98■■□□□ 1.11
TNFSF9-201ENST00000245817 IQCA1Q86XH1 822 aa21.98■■□□□ 1.11
TNFSF9-201ENST00000245817 TAOK3Q9H2K8 898 aa21.98■■□□□ 1.11
TNFSF9-201ENST00000245817 USP40Q9NVE5 1235 aa21.98■■□□□ 1.11
TNFSF9-201ENST00000245817 MYO3BQ8WXR4 1341 aa21.97■■□□□ 1.11
TNFSF9-201ENST00000245817 YDJCA8MPS7 323 aa21.97■■□□□ 1.11
TNFSF9-201ENST00000245817 ORC4O43929 436 aa21.97■■□□□ 1.11
TNFSF9-201ENST00000245817 WTAPQ15007 396 aa21.97■■□□□ 1.11
TNFSF9-201ENST00000245817 SAP30BPQ9UHR5 308 aaKnown RBP21.97■■□□□ 1.11
TNFSF9-201ENST00000245817 BRPF3Q9ULD4 1205 aa21.97■■□□□ 1.11
TNFSF9-201ENST00000245817 KIF3AQ9Y496 699 aa21.97■■□□□ 1.11
TNFSF9-201ENST00000245817 ARFGEF1Q9Y6D6 1849 aa21.96■■□□□ 1.11
TNFSF9-201ENST00000245817 PRDM1O75626 825 aa21.96■■□□□ 1.11
TNFSF9-201ENST00000245817 BRD1O95696 1058 aa21.96■■□□□ 1.11
TNFSF9-201ENST00000245817 SLC4A8Q2Y0W8 1093 aa21.96■■□□□ 1.11
TNFSF9-201ENST00000245817 FAM184AQ8NB25 1140 aa21.96■■□□□ 1.11
TNFSF9-201ENST00000245817 ZDHHC15Q96MV8 337 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms