RNA–Protein interactions for RNA: ENST00000239878.8

UFM1-201, Transcript of ubiquitin fold modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFM1, Length 3,138 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFM1-201ENST00000239878 CCDC173Q0VFZ6 552 aa4.36□□□□□ -1.71
UFM1-201ENST00000239878 CRTC2Q53ET0 693 aaPredicted RBP4.36□□□□□ -1.71
UFM1-201ENST00000239878 UTP14AQ9BVJ6 771 aaKnown RBP4.36□□□□□ -1.71
UFM1-201ENST00000239878 OCEL1Q9H607 264 aa4.36□□□□□ -1.71
UFM1-201ENST00000239878 EFCC1Q9HA90 598 aa4.36□□□□□ -1.71
UFM1-201ENST00000239878 IQSEC3Q9UPP2 1182 aaPredicted RBP4.36□□□□□ -1.71
UFM1-201ENST00000239878 NIP7Q9Y221 180 aaKnown RBP eCLIP4.36□□□□□ -1.71
UFM1-201ENST00000239878 CHD4Q14839 1912 aa4.36□□□□□ -1.71
UFM1-201ENST00000239878 ELL2O00472 640 aaPredicted RBP4.35□□□□□ -1.71
UFM1-201ENST00000239878 RRP1P56182 461 aaKnown RBP4.35□□□□□ -1.71
UFM1-201ENST00000239878 SATB1Q01826 763 aa4.35□□□□□ -1.71
UFM1-201ENST00000239878 BECN1Q14457 450 aa4.35□□□□□ -1.71
UFM1-201ENST00000239878 DIXDC1Q155Q3 683 aa4.35□□□□□ -1.71
UFM1-201ENST00000239878 C4orf46Q504U0 113 aa4.35□□□□□ -1.71
UFM1-201ENST00000239878 EPHA10Q5JZY3 1008 aa4.35□□□□□ -1.71
UFM1-201ENST00000239878 NT5DC4Q86YG4 428 aa4.35□□□□□ -1.71
UFM1-201ENST00000239878 SYNE4Q8N205 404 aa4.35□□□□□ -1.71
UFM1-201ENST00000239878 VGLL2Q8N8G2 317 aa4.35□□□□□ -1.71
UFM1-201ENST00000239878 CEP120Q8N960 986 aa4.35□□□□□ -1.71
UFM1-201ENST00000239878 EPS8L1Q8TE68 723 aa4.35□□□□□ -1.71
UFM1-201ENST00000239878 SETDB2Q96T68 719 aa4.35□□□□□ -1.71
UFM1-201ENST00000239878 CWC25Q9NXE8 425 aaPredicted RBP4.35□□□□□ -1.71
UFM1-201ENST00000239878 DDX60LQ5H9U9 1706 aaKnown RBP4.35□□□□□ -1.71
UFM1-201ENST00000239878 SH3TC1Q8TE82 1336 aa4.35□□□□□ -1.71
UFM1-201ENST00000239878 PIK3CDO00329 1044 aa4.35□□□□□ -1.71
UFM1-201ENST00000239878 ZBTB7BO15156 539 aaPredicted RBP4.35□□□□□ -1.71
UFM1-201ENST00000239878 LZTS3O60299 673 aaPredicted RBP4.35□□□□□ -1.71
UFM1-201ENST00000239878 DDX58O95786 925 aaKnown RBP4.35□□□□□ -1.71
UFM1-201ENST00000239878 CCDC172P0C7W6 258 aa4.35□□□□□ -1.71
UFM1-201ENST00000239878 TNNT1P13805 278 aa4.35□□□□□ -1.71
UFM1-201ENST00000239878 DPEP1P16444 411 aa4.35□□□□□ -1.71
UFM1-201ENST00000239878 CCT4P50991 539 aaKnown RBP4.35□□□□□ -1.71
UFM1-201ENST00000239878 CTSWP56202 376 aa4.35□□□□□ -1.71
UFM1-201ENST00000239878 CWF19L2Q2TBE0 894 aaKnown RBP4.35□□□□□ -1.71
UFM1-201ENST00000239878 C15orf52Q6ZUT6 534 aaKnown RBP4.35□□□□□ -1.71
UFM1-201ENST00000239878 SLC51AQ86UW1 340 aa4.35□□□□□ -1.71
UFM1-201ENST00000239878 CNBD1Q8NA66 436 aa4.35□□□□□ -1.71
UFM1-201ENST00000239878 MYRIPQ8NFW9 859 aa4.35□□□□□ -1.71
UFM1-201ENST00000239878 MYCBPQ99417 103 aaPredicted RBP4.35□□□□□ -1.71
UFM1-201ENST00000239878 STK31Q9BXU1 1019 aa4.35□□□□□ -1.71
UFM1-201ENST00000239878 API5Q9BZZ5 524 aaKnown RBP4.35□□□□□ -1.71
UFM1-201ENST00000239878 TGIF2Q9GZN2 237 aa4.35□□□□□ -1.71
UFM1-201ENST00000239878 PCDH12Q9NPG4 1184 aa4.35□□□□□ -1.71
UFM1-201ENST00000239878 SMC4Q9NTJ3 1288 aa4.35□□□□□ -1.71
UFM1-201ENST00000239878 NOL7Q9UMY1 257 aaKnown RBP4.35□□□□□ -1.71
UFM1-201ENST00000239878 KIF3AQ9Y496 699 aa4.35□□□□□ -1.71
UFM1-201ENST00000239878 PARP3Q9Y6F1 533 aa4.35□□□□□ -1.71
UFM1-201ENST00000239878 MOXD2PA6NHM9 499 aa4.35□□□□□ -1.71
UFM1-201ENST00000239878 F6X3S4 739 aa4.35□□□□□ -1.71
UFM1-201ENST00000239878 GRM8O00222 908 aa4.35□□□□□ -1.71
UFM1-201ENST00000239878 NPR1P16066 1061 aa4.35□□□□□ -1.71
UFM1-201ENST00000239878 POLD1P28340 1107 aa4.35□□□□□ -1.71
UFM1-201ENST00000239878 GTF2A1P52655 376 aaPredicted RBP4.35□□□□□ -1.71
UFM1-201ENST00000239878 MAP2K1Q02750 393 aaPredicted RBP4.35□□□□□ -1.71
UFM1-201ENST00000239878 PDE3AQ14432 1141 aa4.35□□□□□ -1.71
UFM1-201ENST00000239878 BMS1Q14692 1282 aaKnown RBP4.35□□□□□ -1.71
UFM1-201ENST00000239878 PPP1R42Q7Z4L9 355 aa4.35□□□□□ -1.71
UFM1-201ENST00000239878 TTLL11Q8NHH1 800 aa4.35□□□□□ -1.71
UFM1-201ENST00000239878 MYD88Q99836 296 aa4.35□□□□□ -1.71
UFM1-201ENST00000239878 NCAPGQ9BPX3 1015 aa4.35□□□□□ -1.71
UFM1-201ENST00000239878 EGFL7Q9UHF1 273 aa4.35□□□□□ -1.71
UFM1-201ENST00000239878 RSPH14Q9UHP6 348 aa4.35□□□□□ -1.71
UFM1-201ENST00000239878 RCAN3Q9UKA8 241 aa4.35□□□□□ -1.71
UFM1-201ENST00000239878 CCDC66A2RUB6 948 aa4.34□□□□□ -1.71
UFM1-201ENST00000239878 FAM196BA6NMK8 535 aa4.34□□□□□ -1.71
UFM1-201ENST00000239878 HSD3B2P26439 372 aa4.34□□□□□ -1.71
UFM1-201ENST00000239878 SOX11P35716 441 aa4.34□□□□□ -1.71
UFM1-201ENST00000239878 PDE6BP35913 854 aa4.34□□□□□ -1.71
UFM1-201ENST00000239878 ARHGAP4P98171 946 aa4.34□□□□□ -1.71
UFM1-201ENST00000239878 PTK7Q13308 1070 aa4.34□□□□□ -1.71
UFM1-201ENST00000239878 C20orf194Q5TEA3 1177 aa4.34□□□□□ -1.71
UFM1-201ENST00000239878 PLPP6Q8IY26 295 aa4.34□□□□□ -1.71
UFM1-201ENST00000239878 MASTLQ96GX5 879 aa4.34□□□□□ -1.71
UFM1-201ENST00000239878 SUCLG2Q96I99 432 aa4.34□□□□□ -1.71
UFM1-201ENST00000239878 MKRN1Q9UHC7 482 aaKnown RBP4.34□□□□□ -1.71
UFM1-201ENST00000239878 COL4A3BPQ9Y5P4 624 aa4.34□□□□□ -1.71
UFM1-201ENST00000239878 SCN9AQ15858 1988 aa4.34□□□□□ -1.71
UFM1-201ENST00000239878 THSD7BQ9C0I4 1608 aa4.34□□□□□ -1.72
UFM1-201ENST00000239878 ERICH4A6NGS2 130 aa4.34□□□□□ -1.72
UFM1-201ENST00000239878 NFKBIEO00221 500 aa4.34□□□□□ -1.72
UFM1-201ENST00000239878 DHX16O60231 1041 aaKnown RBP4.34□□□□□ -1.72
UFM1-201ENST00000239878 PDE8AO60658 829 aa4.34□□□□□ -1.72
UFM1-201ENST00000239878 NBPF7P0C2Y1 421 aaPredicted RBP4.34□□□□□ -1.72
UFM1-201ENST00000239878 TPTE2Q6XPS3 522 aa4.34□□□□□ -1.72
UFM1-201ENST00000239878 GPATCH11Q8N954 259 aa4.34□□□□□ -1.72
UFM1-201ENST00000239878 ZBTB40Q9NUA8 1239 aa4.34□□□□□ -1.72
UFM1-201ENST00000239878 ISY1Q9ULR0 285 aaKnown RBP4.34□□□□□ -1.72
UFM1-201ENST00000239878 ADGRG1Q9Y653 693 aa4.34□□□□□ -1.72
UFM1-201ENST00000239878 ECM29Q5VYK3 1845 aa4.34□□□□□ -1.72
UFM1-201ENST00000239878 COL1A1P02452 1464 aaPredicted RBP4.33□□□□□ -1.72
UFM1-201ENST00000239878 USP17L15C9J2P7 530 aa4.33□□□□□ -1.72
UFM1-201ENST00000239878 USP17L10C9JJH3 530 aa4.33□□□□□ -1.72
UFM1-201ENST00000239878 USP17L13C9JLJ4 530 aa4.33□□□□□ -1.72
UFM1-201ENST00000239878 USP17L12C9JPN9 530 aa4.33□□□□□ -1.72
UFM1-201ENST00000239878 USP17L11C9JVI0 530 aa4.33□□□□□ -1.72
UFM1-201ENST00000239878 USP17L21D6R901 530 aa4.33□□□□□ -1.72
UFM1-201ENST00000239878 USP17L18D6R9N7 530 aa4.33□□□□□ -1.72
UFM1-201ENST00000239878 USP17L22D6RA61 530 aa4.33□□□□□ -1.72
UFM1-201ENST00000239878 USP17L17D6RBQ6 530 aa4.33□□□□□ -1.72
UFM1-201ENST00000239878 USP17L19D6RCP7 530 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms