RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 COL1A1P02452 1464 aaPredicted RBP13.7□□□□□ -0.22
SF3B6-201ENST00000233468 ECM29Q5VYK3 1845 aa13.7□□□□□ -0.22
SF3B6-201ENST00000233468 BAG3O95817 575 aa13.7□□□□□ -0.22
SF3B6-201ENST00000233468 CYP2E1P05181 493 aaPredicted RBP13.7□□□□□ -0.22
SF3B6-201ENST00000233468 FKBP1BP68106 108 aa13.7□□□□□ -0.22
SF3B6-201ENST00000233468 TTLL12Q14166 644 aaPredicted RBP13.7□□□□□ -0.22
SF3B6-201ENST00000233468 GRIK5Q16478 980 aa13.7□□□□□ -0.22
SF3B6-201ENST00000233468 SUPT20HL1Q3ZLR7 823 aa13.7□□□□□ -0.22
SF3B6-201ENST00000233468 FKBP1CQ5VVH2 108 aa13.7□□□□□ -0.22
SF3B6-201ENST00000233468 PI16Q6UXB8 463 aa13.7□□□□□ -0.22
SF3B6-201ENST00000233468 CERS3Q8IU89 383 aa13.7□□□□□ -0.22
SF3B6-201ENST00000233468 ZNF70Q9UC06 446 aaPredicted RBP13.7□□□□□ -0.22
SF3B6-201ENST00000233468 TTC41PQ6P2S7 1318 aa13.69□□□□□ -0.22
SF3B6-201ENST00000233468 CENPFP49454 3210 aa13.69□□□□□ -0.22
SF3B6-201ENST00000233468 CLRN2A0PK11 232 aa13.69□□□□□ -0.22
SF3B6-201ENST00000233468 MECOMQ03112 1051 aa13.69□□□□□ -0.22
SF3B6-201ENST00000233468 DIXDC1Q155Q3 683 aa13.69□□□□□ -0.22
SF3B6-201ENST00000233468 NAA16Q6N069 864 aaPredicted RBP13.69□□□□□ -0.22
SF3B6-201ENST00000233468 APOBEC3HQ6NTF7 200 aaKnown RBP13.69□□□□□ -0.22
SF3B6-201ENST00000233468 TBC1D9Q6ZT07 1266 aa13.69□□□□□ -0.22
SF3B6-201ENST00000233468 CTU1Q7Z7A3 348 aaKnown RBP13.69□□□□□ -0.22
SF3B6-201ENST00000233468 IFNL1Q8IU54 200 aa13.69□□□□□ -0.22
SF3B6-201ENST00000233468 SMC5Q8IY18 1101 aa13.69□□□□□ -0.22
SF3B6-201ENST00000233468 NSUN4Q96CB9 384 aaKnown RBP13.69□□□□□ -0.22
SF3B6-201ENST00000233468 HOOK2Q96ED9 719 aa13.69□□□□□ -0.22
SF3B6-201ENST00000233468 DNAJC2Q99543 621 aaKnown RBP13.69□□□□□ -0.22
SF3B6-201ENST00000233468 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.69□□□□□ -0.22
SF3B6-201ENST00000233468 DEFB129Q9H1M3 183 aa13.69□□□□□ -0.22
SF3B6-201ENST00000233468 R3HDMLQ9H3Y0 253 aa13.69□□□□□ -0.22
SF3B6-201ENST00000233468 TDRD3Q9H7E2 651 aaKnown RBP13.69□□□□□ -0.22
SF3B6-201ENST00000233468 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.69□□□□□ -0.22
SF3B6-201ENST00000233468 DAGLAQ9Y4D2 1042 aa13.69□□□□□ -0.22
SF3B6-201ENST00000233468 HTTP42858 3142 aa13.69□□□□□ -0.22
SF3B6-201ENST00000233468 MROH7-TTC4A0A0A0MT08 1334 aa13.68□□□□□ -0.22
SF3B6-201ENST00000233468 GAKO14976 1311 aa13.68□□□□□ -0.22
SF3B6-201ENST00000233468 IDH1O75874 414 aaKnown RBP13.68□□□□□ -0.22
SF3B6-201ENST00000233468 PLCG2P16885 1265 aa13.68□□□□□ -0.22
SF3B6-201ENST00000233468 LRRFIP1Q32MZ4 808 aaKnown RBP13.68□□□□□ -0.22
SF3B6-201ENST00000233468 ZNF296Q8WUU4 475 aaPredicted RBP13.68□□□□□ -0.22
SF3B6-201ENST00000233468 HAUS7Q99871 368 aa13.68□□□□□ -0.22
SF3B6-201ENST00000233468 BOLA2Q9H3K6 86 aa13.68□□□□□ -0.22
SF3B6-201ENST00000233468 USP40Q9NVE5 1235 aa13.68□□□□□ -0.22
SF3B6-201ENST00000233468 TRPC6Q9Y210 931 aa13.68□□□□□ -0.22
SF3B6-201ENST00000233468 AOX1Q06278 1338 aa13.67□□□□□ -0.22
SF3B6-201ENST00000233468 GLRX3O76003 335 aaKnown RBP13.67□□□□□ -0.22
SF3B6-201ENST00000233468 MX1P20591 662 aa13.67□□□□□ -0.22
SF3B6-201ENST00000233468 TM4SF4P48230 202 aa13.67□□□□□ -0.22
SF3B6-201ENST00000233468 RASA3Q14644 834 aa13.67□□□□□ -0.22
SF3B6-201ENST00000233468 ZSCAN25Q6NSZ9 544 aa13.67□□□□□ -0.22
SF3B6-201ENST00000233468 FAM83AQ86UY5 434 aa13.67□□□□□ -0.22
SF3B6-201ENST00000233468 PAG1Q9NWQ8 432 aa13.67□□□□□ -0.22
SF3B6-201ENST00000233468 ARAP2Q8WZ64 1704 aa13.67□□□□□ -0.22
SF3B6-201ENST00000233468 GPR75-ASB3A0A0A6YYF3 556 aa13.66□□□□□ -0.22
SF3B6-201ENST00000233468 TCP10L2B9ZVM9 353 aa13.66□□□□□ -0.22
SF3B6-201ENST00000233468 GOLIM4O00461 696 aa13.66□□□□□ -0.22
SF3B6-201ENST00000233468 PPP1R12BO60237 982 aaPredicted RBP13.66□□□□□ -0.22
SF3B6-201ENST00000233468 IGHDP01880 384 aa13.66□□□□□ -0.22
SF3B6-201ENST00000233468 BTDP43251 543 aa13.66□□□□□ -0.22
SF3B6-201ENST00000233468 CDC42EP5Q6NZY7 148 aa13.66□□□□□ -0.22
SF3B6-201ENST00000233468 PIH1D3Q9NQM4 214 aaKnown RBP13.66□□□□□ -0.22
SF3B6-201ENST00000233468 HPS5Q9UPZ3 1129 aa13.66□□□□□ -0.22
SF3B6-201ENST00000233468 MKI67P46013 3256 aaKnown RBP13.66□□□□□ -0.22
SF3B6-201ENST00000233468 CYP7A1P22680 504 aa13.65□□□□□ -0.22
SF3B6-201ENST00000233468 NUCB1Q02818 461 aa13.65□□□□□ -0.22
SF3B6-201ENST00000233468 B4GALNT3Q6L9W6 998 aa13.65□□□□□ -0.22
SF3B6-201ENST00000233468 ARMC9Q7Z3E5 817 aa13.65□□□□□ -0.22
SF3B6-201ENST00000233468 CHD1LQ86WJ1 897 aa13.65□□□□□ -0.22
SF3B6-201ENST00000233468 ANGEL1Q9UNK9 670 aaKnown RBP13.65□□□□□ -0.22
SF3B6-201ENST00000233468 SSC5DA1L4H1 1573 aa13.64□□□□□ -0.23
SF3B6-201ENST00000233468 GPR25O00155 361 aa13.64□□□□□ -0.23
SF3B6-201ENST00000233468 ENTPD3O75355 529 aa13.64□□□□□ -0.23
SF3B6-201ENST00000233468 PPP4CP60510 307 aa13.64□□□□□ -0.23
SF3B6-201ENST00000233468 LDLRAD1Q5T700 205 aa13.64□□□□□ -0.23
SF3B6-201ENST00000233468 SLC9C2Q5TAH2 1124 aa13.64□□□□□ -0.23
SF3B6-201ENST00000233468 MAGEB6Q8N7X4 407 aa13.64□□□□□ -0.23
SF3B6-201ENST00000233468 FAM151AQ8WW52 585 aa13.64□□□□□ -0.23
SF3B6-201ENST00000233468 CLMNQ96JQ2 1002 aa13.64□□□□□ -0.23
SF3B6-201ENST00000233468 IDI2Q9BXS1 227 aa13.64□□□□□ -0.23
SF3B6-201ENST00000233468 LNPKQ9C0E8 428 aa13.64□□□□□ -0.23
SF3B6-201ENST00000233468 ANTXR1Q9H6X2 564 aa13.64□□□□□ -0.23
SF3B6-201ENST00000233468 PCDHB8Q9UN66 801 aa13.64□□□□□ -0.23
SF3B6-201ENST00000233468 UNCXA6NJT0 531 aa13.63□□□□□ -0.23
SF3B6-201ENST00000233468 CHRM1P11229 460 aaPredicted RBP13.63□□□□□ -0.23
SF3B6-201ENST00000233468 SPRYD7Q5W111 196 aa13.63□□□□□ -0.23
SF3B6-201ENST00000233468 BMP2KQ9NSY1 1161 aaPredicted RBP13.63□□□□□ -0.23
SF3B6-201ENST00000233468 STAP2Q9UGK3 403 aa13.63□□□□□ -0.23
SF3B6-201ENST00000233468 NDUFB9Q9Y6M9 179 aa13.63□□□□□ -0.23
SF3B6-201ENST00000233468 LAMB1P07942 1786 aa13.63□□□□□ -0.23
SF3B6-201ENST00000233468 OTOFQ9HC10 1997 aa13.62□□□□□ -0.23
SF3B6-201ENST00000233468 ATMINO43313 823 aaPredicted RBP13.62□□□□□ -0.23
SF3B6-201ENST00000233468 ZFYP08048 801 aaPredicted RBP13.62□□□□□ -0.23
SF3B6-201ENST00000233468 TIE1P35590 1138 aa13.62□□□□□ -0.23
SF3B6-201ENST00000233468 IREB2P48200 963 aaKnown RBP13.62□□□□□ -0.23
SF3B6-201ENST00000233468 CACNB3P54284 484 aa13.62□□□□□ -0.23
SF3B6-201ENST00000233468 ERICH6BQ5W0A0 696 aa13.62□□□□□ -0.23
SF3B6-201ENST00000233468 DCAF15Q66K64 600 aa13.62□□□□□ -0.23
SF3B6-201ENST00000233468 ASTLQ6HA08 431 aaPredicted RBP13.62□□□□□ -0.23
SF3B6-201ENST00000233468 TICAM2Q86XR7 235 aa13.62□□□□□ -0.23
SF3B6-201ENST00000233468 TEX11Q8IYF3 940 aa13.62□□□□□ -0.23
SF3B6-201ENST00000233468 AATFQ9NY61 560 aaKnown RBP eCLIP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms