RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 ERO1BQ86YB8 467 aa17.44■□□□□ 0.38
GPN3-201ENST00000228827 ERC1Q8IUD2 1116 aa17.44■□□□□ 0.38
GPN3-201ENST00000228827 IL1RAPL2Q9NP60 686 aa17.44■□□□□ 0.38
GPN3-201ENST00000228827 RFX7Q2KHR2 1363 aa17.43■□□□□ 0.38
GPN3-201ENST00000228827 DDTLA6NHG4 134 aaPredicted RBP17.43■□□□□ 0.38
GPN3-201ENST00000228827 CYP2E1P05181 493 aaPredicted RBP17.43■□□□□ 0.38
GPN3-201ENST00000228827 SLURP2P0DP57 97 aa17.43■□□□□ 0.38
GPN3-201ENST00000228827 CRHR2Q13324 411 aa17.43■□□□□ 0.38
GPN3-201ENST00000228827 AACSQ86V21 672 aa17.43■□□□□ 0.38
GPN3-201ENST00000228827 IRF6O14896 467 aa17.42■□□□□ 0.38
GPN3-201ENST00000228827 NOM1Q5C9Z4 860 aaKnown RBP17.42■□□□□ 0.38
GPN3-201ENST00000228827 NAA16Q6N069 864 aaPredicted RBP17.42■□□□□ 0.38
GPN3-201ENST00000228827 SIRT2Q8IXJ6 389 aa17.42■□□□□ 0.38
GPN3-201ENST00000228827 RPAP2Q8IXW5 612 aaPredicted RBP17.42■□□□□ 0.38
GPN3-201ENST00000228827 ZNF112Q9UJU3 913 aa17.42■□□□□ 0.38
GPN3-201ENST00000228827 PPIL2Q13356 520 aa17.41■□□□□ 0.38
GPN3-201ENST00000228827 HSP90AB4PQ58FF6 505 aa17.41■□□□□ 0.38
GPN3-201ENST00000228827 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.41■□□□□ 0.38
GPN3-201ENST00000228827 RHPN1Q8TCX5 695 aa17.41■□□□□ 0.38
GPN3-201ENST00000228827 ZNF512BQ96KM6 892 aaPredicted RBP17.41■□□□□ 0.38
GPN3-201ENST00000228827 NOL10Q9BSC4 688 aaKnown RBP17.41■□□□□ 0.38
GPN3-201ENST00000228827 PIH1D3Q9NQM4 214 aaKnown RBP17.41■□□□□ 0.38
GPN3-201ENST00000228827 NDUFB9Q9Y6M9 179 aa17.41■□□□□ 0.38
GPN3-201ENST00000228827 ATRNL1Q5VV63 1379 aa17.4■□□□□ 0.38
GPN3-201ENST00000228827 HMMRO75330 724 aa17.4■□□□□ 0.38
GPN3-201ENST00000228827 PPATQ06203 517 aa17.4■□□□□ 0.38
GPN3-201ENST00000228827 SNAPC2Q13487 334 aa17.4■□□□□ 0.38
GPN3-201ENST00000228827 TEX11Q8IYF3 940 aa17.4■□□□□ 0.38
GPN3-201ENST00000228827 FAM43AQ8N2R8 423 aa17.4■□□□□ 0.38
GPN3-201ENST00000228827 SH3RF3Q8TEJ3 882 aaPredicted RBP17.4■□□□□ 0.38
GPN3-201ENST00000228827 AATFQ9NY61 560 aaKnown RBP eCLIP17.4■□□□□ 0.38
GPN3-201ENST00000228827 CETPP11597 493 aa17.39■□□□□ 0.37
GPN3-201ENST00000228827 TAF1CQ15572 869 aaPredicted RBP17.39■□□□□ 0.37
GPN3-201ENST00000228827 CHMP4BQ9H444 224 aaKnown RBP17.39■□□□□ 0.37
GPN3-201ENST00000228827 MYH2Q9UKX2 1941 aa17.39■□□□□ 0.37
GPN3-201ENST00000228827 PHF20L1A8MW92 1017 aa17.38■□□□□ 0.37
GPN3-201ENST00000228827 IDH1O75874 414 aaKnown RBP17.38■□□□□ 0.37
GPN3-201ENST00000228827 PDE3AQ14432 1141 aa17.38■□□□□ 0.37
GPN3-201ENST00000228827 NOL9Q5SY16 702 aaKnown RBP17.38■□□□□ 0.37
GPN3-201ENST00000228827 ADGRA1Q86SQ6 560 aa17.38■□□□□ 0.37
GPN3-201ENST00000228827 FAM196BA6NMK8 535 aa17.37■□□□□ 0.37
GPN3-201ENST00000228827 BTBD19C9JJ37 291 aa17.37■□□□□ 0.37
GPN3-201ENST00000228827 BAG3O95817 575 aa17.37■□□□□ 0.37
GPN3-201ENST00000228827 CD99L2Q8TCZ2 262 aa17.37■□□□□ 0.37
GPN3-201ENST00000228827 KIF1BPQ96EK5 621 aa17.37■□□□□ 0.37
GPN3-201ENST00000228827 OSBPL5Q9H0X9 879 aaPredicted RBP17.37■□□□□ 0.37
GPN3-201ENST00000228827 ANTXR1Q9H6X2 564 aa17.37■□□□□ 0.37
GPN3-201ENST00000228827 ZFYVE28Q9HCC9 887 aa17.37■□□□□ 0.37
GPN3-201ENST00000228827 HPS5Q9UPZ3 1129 aa17.37■□□□□ 0.37
GPN3-201ENST00000228827 MAP4K4O95819 1239 aaPredicted RBP17.37■□□□□ 0.37
GPN3-201ENST00000228827 PKN2Q16513 984 aaKnown RBP17.37■□□□□ 0.37
GPN3-201ENST00000228827 SCYL3Q8IZE3 742 aa17.37■□□□□ 0.37
GPN3-201ENST00000228827 CLASRPQ8N2M8 674 aaKnown RBP17.37■□□□□ 0.37
GPN3-201ENST00000228827 PICK1Q9NRD5 415 aa17.37■□□□□ 0.37
GPN3-201ENST00000228827 TRIM17Q9Y577 477 aa17.37■□□□□ 0.37
GPN3-201ENST00000228827 NPM3O75607 178 aaKnown RBP17.36■□□□□ 0.37
GPN3-201ENST00000228827 IFIT2P09913 472 aaKnown RBP17.36■□□□□ 0.37
GPN3-201ENST00000228827 CYP7A1P22680 504 aa17.36■□□□□ 0.37
GPN3-201ENST00000228827 DYNLL1P63167 89 aaKnown RBP17.36■□□□□ 0.37
GPN3-201ENST00000228827 SP3Q02447 781 aa17.36■□□□□ 0.37
GPN3-201ENST00000228827 MAP3K10Q02779 954 aa17.36■□□□□ 0.37
GPN3-201ENST00000228827 TGFBRAP1Q8WUH2 860 aa17.36■□□□□ 0.37
GPN3-201ENST00000228827 YTHDC1Q96MU7 727 aaKnown RBP17.36■□□□□ 0.37
GPN3-201ENST00000228827 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.36■□□□□ 0.37
GPN3-201ENST00000228827 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.36■□□□□ 0.37
GPN3-201ENST00000228827 KCNH4Q9UQ05 1017 aa17.36■□□□□ 0.37
GPN3-201ENST00000228827 PLCG2P16885 1265 aa17.35■□□□□ 0.37
GPN3-201ENST00000228827 PTPRAP18433 802 aa17.35■□□□□ 0.37
GPN3-201ENST00000228827 OTOP1Q7RTM1 612 aa17.35■□□□□ 0.37
GPN3-201ENST00000228827 MAPKAPK5Q8IW41 473 aa17.35■□□□□ 0.37
GPN3-201ENST00000228827 MAGEB6Q8N7X4 407 aa17.35■□□□□ 0.37
GPN3-201ENST00000228827 ERO1AQ96HE7 468 aa17.35■□□□□ 0.37
GPN3-201ENST00000228827 ZHX2Q9Y6X8 837 aa17.35■□□□□ 0.37
GPN3-201ENST00000228827 LAMB1P07942 1786 aa17.34■□□□□ 0.37
GPN3-201ENST00000228827 CTNND1O60716 968 aaKnown RBP17.34■□□□□ 0.37
GPN3-201ENST00000228827 RAB11FIP3O75154 756 aa17.34■□□□□ 0.37
GPN3-201ENST00000228827 SOX10P56693 466 aa17.34■□□□□ 0.37
GPN3-201ENST00000228827 PPP4CP60510 307 aa17.34■□□□□ 0.37
GPN3-201ENST00000228827 FBXO46Q6PJ61 603 aaPredicted RBP17.34■□□□□ 0.37
GPN3-201ENST00000228827 CCDC84Q86UT8 332 aaPredicted RBP17.34■□□□□ 0.37
GPN3-201ENST00000228827 MIGA1Q8NAN2 632 aa17.34■□□□□ 0.37
GPN3-201ENST00000228827 DNAJC2Q99543 621 aaKnown RBP17.33■□□□□ 0.37
GPN3-201ENST00000228827 PDHXO00330 501 aa17.32■□□□□ 0.36
GPN3-201ENST00000228827 TBC1D12O60347 775 aa17.32■□□□□ 0.36
GPN3-201ENST00000228827 CAP1Q01518 475 aa17.32■□□□□ 0.36
GPN3-201ENST00000228827 MAP3K12Q12852 859 aa17.32■□□□□ 0.36
GPN3-201ENST00000228827 MOGSQ13724 837 aa17.32■□□□□ 0.36
GPN3-201ENST00000228827 ANKRD23Q86SG2 305 aa17.32■□□□□ 0.36
GPN3-201ENST00000228827 EFCC1Q9HA90 598 aa17.32■□□□□ 0.36
GPN3-201ENST00000228827 SAP30BPQ9UHR5 308 aaKnown RBP17.32■□□□□ 0.36
GPN3-201ENST00000228827 DOCK2Q92608 1830 aa17.32■□□□□ 0.36
GPN3-201ENST00000228827 FLT1P17948 1338 aa17.32■□□□□ 0.36
GPN3-201ENST00000228827 MAST2Q6P0Q8 1798 aa17.32■□□□□ 0.36
GPN3-201ENST00000228827 TRIM75PA6NK02 468 aa17.31■□□□□ 0.36
GPN3-201ENST00000228827 CXCL11O14625 94 aa17.31■□□□□ 0.36
GPN3-201ENST00000228827 SMARCA5O60264 1052 aaPredicted RBP17.31■□□□□ 0.36
GPN3-201ENST00000228827 TLR2O60603 784 aa17.31■□□□□ 0.36
GPN3-201ENST00000228827 ECM2O94769 699 aaPredicted RBP17.31■□□□□ 0.36
GPN3-201ENST00000228827 SLC4A8Q2Y0W8 1093 aa17.31■□□□□ 0.36
GPN3-201ENST00000228827 ZCCHC17Q9NP64 241 aaKnown RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms