RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 DIS3L2Q8IYB7 885 aaKnown RBP16.48■□□□□ 0.23
PRDM4-201ENST00000228437 SHROOM2Q13796 1616 aa16.48■□□□□ 0.23
PRDM4-201ENST00000228437 ZPR1O75312 459 aa16.48■□□□□ 0.23
PRDM4-201ENST00000228437 TRIM21P19474 475 aaKnown RBP16.48■□□□□ 0.23
PRDM4-201ENST00000228437 MAP2K2P36507 400 aa16.48■□□□□ 0.23
PRDM4-201ENST00000228437 SLC9C2Q5TAH2 1124 aa16.48■□□□□ 0.23
PRDM4-201ENST00000228437 CCDC91Q7Z6B0 441 aa16.48■□□□□ 0.23
PRDM4-201ENST00000228437 IFT81Q8WYA0 676 aa16.48■□□□□ 0.23
PRDM4-201ENST00000228437 CUTAO60888 179 aa16.47■□□□□ 0.23
PRDM4-201ENST00000228437 GIGYF1O75420 1035 aaPredicted RBP16.47■□□□□ 0.23
PRDM4-201ENST00000228437 SLC4A8Q2Y0W8 1093 aa16.47■□□□□ 0.23
PRDM4-201ENST00000228437 MAATS1Q7Z4T9 603 aa16.47■□□□□ 0.23
PRDM4-201ENST00000228437 PLCD4Q9BRC7 762 aa16.47■□□□□ 0.23
PRDM4-201ENST00000228437 MAGEA9P43362 315 aa16.47■□□□□ 0.23
PRDM4-201ENST00000228437 TANGO6Q9C0B7 1094 aa16.47■□□□□ 0.23
PRDM4-201ENST00000228437 DDX21Q9NR30 783 aaKnown RBP eCLIP16.47■□□□□ 0.23
PRDM4-201ENST00000228437 MKRN1Q9UHC7 482 aaKnown RBP16.47■□□□□ 0.23
PRDM4-201ENST00000228437 IKBKBO14920 756 aa16.47■□□□□ 0.23
PRDM4-201ENST00000228437 FGAP02671 866 aa16.47■□□□□ 0.23
PRDM4-201ENST00000228437 CDC25AP30304 524 aa16.47■□□□□ 0.23
PRDM4-201ENST00000228437 GNGT1P63211 74 aa16.47■□□□□ 0.23
PRDM4-201ENST00000228437 KIF23Q02241 960 aaPredicted RBP16.47■□□□□ 0.23
PRDM4-201ENST00000228437 HLTFQ14527 1009 aaKnown RBP eCLIP16.47■□□□□ 0.23
PRDM4-201ENST00000228437 SLC39A14Q15043 492 aa16.47■□□□□ 0.23
PRDM4-201ENST00000228437 CCDC96Q2M329 555 aa16.47■□□□□ 0.23
PRDM4-201ENST00000228437 PI16Q6UXB8 463 aa16.47■□□□□ 0.23
PRDM4-201ENST00000228437 GBP6Q6ZN66 633 aa16.46■□□□□ 0.23
PRDM4-201ENST00000228437 ZNF274Q96GC6 653 aaPredicted RBP16.46■□□□□ 0.23
PRDM4-201ENST00000228437 CAMSAP1Q5T5Y3 1602 aa16.46■□□□□ 0.23
PRDM4-201ENST00000228437 RNMTO43148 476 aaKnown RBP16.46■□□□□ 0.23
PRDM4-201ENST00000228437 ZRANB2O95218 330 aaKnown RBP eCLIP16.46■□□□□ 0.23
PRDM4-201ENST00000228437 CABP4P57796 275 aa16.46■□□□□ 0.23
PRDM4-201ENST00000228437 TRIM65Q6PJ69 517 aa16.46■□□□□ 0.23
PRDM4-201ENST00000228437 PNKPQ96T60 521 aa16.46■□□□□ 0.23
PRDM4-201ENST00000228437 MYO6Q9UM54 1294 aa16.46■□□□□ 0.23
PRDM4-201ENST00000228437 GOLGA6BA6NDN3 693 aa16.46■□□□□ 0.23
PRDM4-201ENST00000228437 HPDP32754 393 aaPredicted RBP16.46■□□□□ 0.23
PRDM4-201ENST00000228437 ATP2B2Q01814 1243 aa16.46■□□□□ 0.23
PRDM4-201ENST00000228437 PDE4BQ07343 736 aa16.46■□□□□ 0.23
PRDM4-201ENST00000228437 SPA17Q15506 151 aa16.46■□□□□ 0.23
PRDM4-201ENST00000228437 SCLT1Q96NL6 688 aa16.46■□□□□ 0.23
PRDM4-201ENST00000228437 SBNO1A3KN83 1393 aa16.46■□□□□ 0.23
PRDM4-201ENST00000228437 A0A0U1RQJ8 604 aa16.46■□□□□ 0.22
PRDM4-201ENST00000228437 FAM170AA1A519 330 aa16.46■□□□□ 0.22
PRDM4-201ENST00000228437 FRMD3A2A2Y4 597 aa16.46■□□□□ 0.22
PRDM4-201ENST00000228437 NEURL1BA8MQ27 555 aa16.46■□□□□ 0.22
PRDM4-201ENST00000228437 IDEP14735 1019 aa16.46■□□□□ 0.22
PRDM4-201ENST00000228437 MAP3K9P80192 1104 aa16.46■□□□□ 0.22
PRDM4-201ENST00000228437 ZNF174Q15697 407 aa16.46■□□□□ 0.22
PRDM4-201ENST00000228437 FAM71BQ8TC56 605 aa16.46■□□□□ 0.22
PRDM4-201ENST00000228437 ANKRD24Q8TF21 1146 aa16.46■□□□□ 0.22
PRDM4-201ENST00000228437 BRMS1Q9HCU9 246 aa16.46■□□□□ 0.22
PRDM4-201ENST00000228437 POLR3EQ9NVU0 708 aa16.46■□□□□ 0.22
PRDM4-201ENST00000228437 HDAC6Q9UBN7 1215 aa16.46■□□□□ 0.22
PRDM4-201ENST00000228437 ADGRB1O14514 1584 aa16.46■□□□□ 0.22
PRDM4-201ENST00000228437 SMARCC2Q8TAQ2 1214 aa16.45■□□□□ 0.22
PRDM4-201ENST00000228437 SYNRGQ9UMZ2 1314 aa16.45■□□□□ 0.22
PRDM4-201ENST00000228437 GPTP24298 496 aa16.45■□□□□ 0.22
PRDM4-201ENST00000228437 LRRC24Q50LG9 513 aa16.45■□□□□ 0.22
PRDM4-201ENST00000228437 AKAP4Q5JQC9 854 aa16.45■□□□□ 0.22
PRDM4-201ENST00000228437 CNGA4Q8IV77 575 aa16.45■□□□□ 0.22
PRDM4-201ENST00000228437 C19orf44Q9H6X5 657 aa16.45■□□□□ 0.22
PRDM4-201ENST00000228437 MAN1B1Q9UKM7 699 aa16.45■□□□□ 0.22
PRDM4-201ENST00000228437 GOLGA6L10A6NI86 522 aa16.44■□□□□ 0.22
PRDM4-201ENST00000228437 PRR29P0C7W0 189 aa16.44■□□□□ 0.22
PRDM4-201ENST00000228437 FBXW10Q5XX13 1052 aa16.44■□□□□ 0.22
PRDM4-201ENST00000228437 INCENPQ9NQS7 918 aa16.44■□□□□ 0.22
PRDM4-201ENST00000228437 IQSEC3Q9UPP2 1182 aaPredicted RBP16.44■□□□□ 0.22
PRDM4-201ENST00000228437 GPAA1O43292 621 aa16.44■□□□□ 0.22
PRDM4-201ENST00000228437 MLKLQ8NB16 471 aa16.44■□□□□ 0.22
PRDM4-201ENST00000228437 HELBQ8NG08 1087 aaPredicted RBP16.44■□□□□ 0.22
PRDM4-201ENST00000228437 TRIM47Q96LD4 638 aa16.44■□□□□ 0.22
PRDM4-201ENST00000228437 HELLSQ9NRZ9 838 aa16.44■□□□□ 0.22
PRDM4-201ENST00000228437 M0R2C6 588 aa16.44■□□□□ 0.22
PRDM4-201ENST00000228437 JPH2Q9BR39 696 aaPredicted RBP16.44■□□□□ 0.22
PRDM4-201ENST00000228437 TFR2Q9UP52 801 aa16.44■□□□□ 0.22
PRDM4-201ENST00000228437 MAST3O60307 1309 aa16.44■□□□□ 0.22
PRDM4-201ENST00000228437 GOLGA6L7A0A1B0GV03 622 aa16.43■□□□□ 0.22
PRDM4-201ENST00000228437 MYO1BO43795 1136 aa16.43■□□□□ 0.22
PRDM4-201ENST00000228437 FDPSP14324 419 aaKnown RBP16.43■□□□□ 0.22
PRDM4-201ENST00000228437 CCDC93Q567U6 631 aa16.43■□□□□ 0.22
PRDM4-201ENST00000228437 ANKRD18AQ8IVF6 992 aa16.43■□□□□ 0.22
PRDM4-201ENST00000228437 NOA1Q8NC60 698 aaKnown RBP16.43■□□□□ 0.22
PRDM4-201ENST00000228437 ABCF2Q9UG63 623 aa16.43■□□□□ 0.22
PRDM4-201ENST00000228437 IGSF1Q8N6C5 1336 aa16.43■□□□□ 0.22
PRDM4-201ENST00000228437 HSF2BPO75031 334 aa16.43■□□□□ 0.22
PRDM4-201ENST00000228437 FMR1Q06787 632 aaKnown RBP eCLIP16.43■□□□□ 0.22
PRDM4-201ENST00000228437 MUM1L1Q5H9M0 696 aa16.43■□□□□ 0.22
PRDM4-201ENST00000228437 SHC4Q6S5L8 630 aa16.43■□□□□ 0.22
PRDM4-201ENST00000228437 BANK1Q8NDB2 785 aa16.43■□□□□ 0.22
PRDM4-201ENST00000228437 OSBP2Q969R2 916 aa16.43■□□□□ 0.22
PRDM4-201ENST00000228437 HAUS7Q99871 368 aa16.43■□□□□ 0.22
PRDM4-201ENST00000228437 CD163L1Q9NR16 1453 aa16.43■□□□□ 0.22
PRDM4-201ENST00000228437 ARHGEF10O15013 1369 aa16.43■□□□□ 0.22
PRDM4-201ENST00000228437 TDRD12Q587J7 1177 aaKnown RBP16.43■□□□□ 0.22
PRDM4-201ENST00000228437 PACS2Q86VP3 889 aa16.43■□□□□ 0.22
PRDM4-201ENST00000228437 ANGEL1Q9UNK9 670 aaKnown RBP16.43■□□□□ 0.22
PRDM4-201ENST00000228437 CEP131Q9UPN4 1083 aa16.43■□□□□ 0.22
PRDM4-201ENST00000228437 LUC7L2Q9Y383 392 aaKnown RBP16.43■□□□□ 0.22
PRDM4-201ENST00000228437 TULP2O00295 520 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms