RNA–Protein interactions for RNA: ENST00000223061.5

PCOLCE-201, Transcript of procollagen C-endopeptidase enhancer, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCOLCE, Length 1,702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-201ENST00000223061 MAPKAPK5Q8IW41 473 aa17.75■□□□□ 0.43
PCOLCE-201ENST00000223061 CCDC136Q96JN2 1154 aa17.75■□□□□ 0.43
PCOLCE-201ENST00000223061 RIOK1Q9BRS2 568 aaKnown RBP17.75■□□□□ 0.43
PCOLCE-201ENST00000223061 RPAP1Q9BWH6 1393 aaPredicted RBP17.74■□□□□ 0.43
PCOLCE-201ENST00000223061 PAPPA2Q9BXP8 1791 aa17.74■□□□□ 0.43
PCOLCE-201ENST00000223061 VEGFBP49765 207 aa17.74■□□□□ 0.43
PCOLCE-201ENST00000223061 UBE3CQ15386 1083 aa17.74■□□□□ 0.43
PCOLCE-201ENST00000223061 MIGA2Q7L4E1 593 aa17.74■□□□□ 0.43
PCOLCE-201ENST00000223061 SH3BP5LQ7L8J4 393 aa17.74■□□□□ 0.43
PCOLCE-201ENST00000223061 CERS3Q8IU89 383 aa17.74■□□□□ 0.43
PCOLCE-201ENST00000223061 CAPNS2Q96L46 248 aa17.74■□□□□ 0.43
PCOLCE-201ENST00000223061 CSRNP1Q96S65 589 aa17.74■□□□□ 0.43
PCOLCE-201ENST00000223061 DDTLA6NHG4 134 aaPredicted RBP17.73■□□□□ 0.43
PCOLCE-201ENST00000223061 USP2O75604 605 aaPredicted RBP17.73■□□□□ 0.43
PCOLCE-201ENST00000223061 USP5P45974 858 aa17.73■□□□□ 0.43
PCOLCE-201ENST00000223061 ZNF157P51786 506 aaPredicted RBP17.73■□□□□ 0.43
PCOLCE-201ENST00000223061 RGMBQ6NW40 437 aa17.73■□□□□ 0.43
PCOLCE-201ENST00000223061 CENPQQ7L2Z9 268 aaPredicted RBP17.73■□□□□ 0.43
PCOLCE-201ENST00000223061 LCORLQ8N3X6 602 aa17.73■□□□□ 0.43
PCOLCE-201ENST00000223061 HOOK2Q96ED9 719 aa17.73■□□□□ 0.43
PCOLCE-201ENST00000223061 OSBPL5Q9H0X9 879 aaPredicted RBP17.73■□□□□ 0.43
PCOLCE-201ENST00000223061 ARMT1Q9H993 441 aa17.73■□□□□ 0.43
PCOLCE-201ENST00000223061 TRIM6-TRIM34B2RNG4 842 aa17.72■□□□□ 0.43
PCOLCE-201ENST00000223061 RNF113AO15541 343 aaKnown RBP17.72■□□□□ 0.43
PCOLCE-201ENST00000223061 NPM3O75607 178 aaKnown RBP17.72■□□□□ 0.43
PCOLCE-201ENST00000223061 MBD4O95243 580 aa17.72■□□□□ 0.43
PCOLCE-201ENST00000223061 IREB2P48200 963 aaKnown RBP17.72■□□□□ 0.43
PCOLCE-201ENST00000223061 ERICH6BQ5W0A0 696 aa17.72■□□□□ 0.43
PCOLCE-201ENST00000223061 HHIPL1Q96JK4 782 aa17.72■□□□□ 0.43
PCOLCE-201ENST00000223061 OSBPL3Q9H4L5 887 aa17.72■□□□□ 0.43
PCOLCE-201ENST00000223061 FLT1P17948 1338 aa17.72■□□□□ 0.43
PCOLCE-201ENST00000223061 ECE1P42892 770 aa17.72■□□□□ 0.43
PCOLCE-201ENST00000223061 LRRFIP1Q32MZ4 808 aaKnown RBP17.72■□□□□ 0.43
PCOLCE-201ENST00000223061 DCAF15Q66K64 600 aa17.72■□□□□ 0.43
PCOLCE-201ENST00000223061 EVI5LQ96CN4 794 aa17.72■□□□□ 0.43
PCOLCE-201ENST00000223061 SAP30BPQ9UHR5 308 aaKnown RBP17.72■□□□□ 0.43
PCOLCE-201ENST00000223061 WDR33Q9C0J8 1336 aaKnown RBP17.71■□□□□ 0.43
PCOLCE-201ENST00000223061 ZFYP08048 801 aaPredicted RBP17.71■□□□□ 0.43
PCOLCE-201ENST00000223061 MAP3K11Q16584 847 aa17.71■□□□□ 0.43
PCOLCE-201ENST00000223061 LDLRAD1Q5T700 205 aa17.71■□□□□ 0.43
PCOLCE-201ENST00000223061 CRNKL1Q9BZJ0 848 aaKnown RBP17.71■□□□□ 0.43
PCOLCE-201ENST00000223061 PUS7LQ9H0K6 701 aaKnown RBP17.71■□□□□ 0.43
PCOLCE-201ENST00000223061 SLURP2P0DP57 97 aa17.7■□□□□ 0.42
PCOLCE-201ENST00000223061 SLC4A8Q2Y0W8 1093 aa17.7■□□□□ 0.42
PCOLCE-201ENST00000223061 APPBP2Q92624 585 aa17.7■□□□□ 0.42
PCOLCE-201ENST00000223061 RILPL2Q969X0 211 aa17.7■□□□□ 0.42
PCOLCE-201ENST00000223061 AIDAQ96BJ3 306 aa17.7■□□□□ 0.42
PCOLCE-201ENST00000223061 CLMNQ96JQ2 1002 aa17.7■□□□□ 0.42
PCOLCE-201ENST00000223061 ZNF341Q9BYN7 854 aa17.7■□□□□ 0.42
PCOLCE-201ENST00000223061 ATRNL1Q5VV63 1379 aa17.7■□□□□ 0.42
PCOLCE-201ENST00000223061 OSBP2Q969R2 916 aa17.69■□□□□ 0.42
PCOLCE-201ENST00000223061 WRNIP1Q96S55 665 aa17.69■□□□□ 0.42
PCOLCE-201ENST00000223061 PALD1Q9ULE6 856 aa17.69■□□□□ 0.42
PCOLCE-201ENST00000223061 PRKAB2O43741 272 aa17.69■□□□□ 0.42
PCOLCE-201ENST00000223061 AOC2O75106 756 aa17.69■□□□□ 0.42
PCOLCE-201ENST00000223061 RASAL3Q86YV0 1011 aa17.69■□□□□ 0.42
PCOLCE-201ENST00000223061 SDR42E1Q8WUS8 393 aa17.69■□□□□ 0.42
PCOLCE-201ENST00000223061 CCDC102AQ96A19 550 aa17.69■□□□□ 0.42
PCOLCE-201ENST00000223061 FAM196BA6NMK8 535 aa17.68■□□□□ 0.42
PCOLCE-201ENST00000223061 M0R2C6 588 aa17.68■□□□□ 0.42
PCOLCE-201ENST00000223061 MAP3K9P80192 1104 aa17.68■□□□□ 0.42
PCOLCE-201ENST00000223061 ANKRD13AQ8IZ07 590 aa17.68■□□□□ 0.42
PCOLCE-201ENST00000223061 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.68■□□□□ 0.42
PCOLCE-201ENST00000223061 SLC10A4Q96EP9 437 aa17.68■□□□□ 0.42
PCOLCE-201ENST00000223061 FAM155AB1AL88 458 aaPredicted RBP17.67■□□□□ 0.42
PCOLCE-201ENST00000223061 SLC10A3P09131 477 aa17.67■□□□□ 0.42
PCOLCE-201ENST00000223061 MKRN3Q13064 507 aaKnown RBP17.67■□□□□ 0.42
PCOLCE-201ENST00000223061 VGLL4Q14135 290 aa17.67■□□□□ 0.42
PCOLCE-201ENST00000223061 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.67■□□□□ 0.42
PCOLCE-201ENST00000223061 SKAP1Q86WV1 359 aa17.67■□□□□ 0.42
PCOLCE-201ENST00000223061 ZKSCAN4Q969J2 545 aaPredicted RBP17.67■□□□□ 0.42
PCOLCE-201ENST00000223061 SEC62Q99442 399 aaKnown RBP17.67■□□□□ 0.42
PCOLCE-201ENST00000223061 DHX36Q9H2U1 1008 aaKnown RBP17.67■□□□□ 0.42
PCOLCE-201ENST00000223061 ELP3Q9H9T3 547 aa17.67■□□□□ 0.42
PCOLCE-201ENST00000223061 CSADQ9Y600 493 aa17.67■□□□□ 0.42
PCOLCE-201ENST00000223061 SLC4A4Q9Y6R1 1079 aa17.67■□□□□ 0.42
PCOLCE-201ENST00000223061 COL2A1P02458 1487 aaPredicted RBP17.67■□□□□ 0.42
PCOLCE-201ENST00000223061 PI4KBQ9UBF8 816 aa17.67■□□□□ 0.42
PCOLCE-201ENST00000223061 GPAA1O43292 621 aa17.66■□□□□ 0.42
PCOLCE-201ENST00000223061 INPP5BP32019 993 aa17.66■□□□□ 0.42
PCOLCE-201ENST00000223061 ZMYM1Q5SVZ6 1142 aa17.66■□□□□ 0.42
PCOLCE-201ENST00000223061 TTC22Q5TAA0 569 aa17.66■□□□□ 0.42
PCOLCE-201ENST00000223061 STRBPQ96SI9 672 aaKnown RBP17.66■□□□□ 0.42
PCOLCE-201ENST00000223061 ZIC5Q96T25 663 aa17.66■□□□□ 0.42
PCOLCE-201ENST00000223061 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.66■□□□□ 0.42
PCOLCE-201ENST00000223061 MCM9Q9NXL9 1143 aa17.66■□□□□ 0.42
PCOLCE-201ENST00000223061 HLA-DOAP06340 250 aa17.65■□□□□ 0.42
PCOLCE-201ENST00000223061 GSPT1P15170 499 aaKnown RBP17.65■□□□□ 0.42
PCOLCE-201ENST00000223061 NOGQ13253 232 aa17.65■□□□□ 0.42
PCOLCE-201ENST00000223061 CRACR2BQ8N4Y2 399 aaPredicted RBP17.65■□□□□ 0.42
PCOLCE-201ENST00000223061 TRIM34Q9BYJ4 488 aa17.65■□□□□ 0.42
PCOLCE-201ENST00000223061 DCP1AQ9NPI6 582 aaPredicted RBP17.65■□□□□ 0.42
PCOLCE-201ENST00000223061 PPP4R2Q9NY27 417 aa17.65■□□□□ 0.42
PCOLCE-201ENST00000223061 UNCXA6NJT0 531 aa17.64■□□□□ 0.41
PCOLCE-201ENST00000223061 POLR3DP05423 398 aaPredicted RBP17.64■□□□□ 0.41
PCOLCE-201ENST00000223061 JMYQ8N9B5 988 aa17.64■□□□□ 0.41
PCOLCE-201ENST00000223061 ATP8A2Q9NTI2 1148 aa17.64■□□□□ 0.41
PCOLCE-201ENST00000223061 ZNF112Q9UJU3 913 aa17.64■□□□□ 0.41
PCOLCE-201ENST00000223061 SNCAIPQ9Y6H5 919 aa17.64■□□□□ 0.41
PCOLCE-201ENST00000223061 MYH7P12883 1935 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms