RNA–Protein interactions for RNA: ENST00000217133.1

TUBB1-201, Transcript of tubulin beta 1 class VI, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB1, Length 3,496 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1-201ENST00000217133 PPFIBP1Q86W92 1011 aa11.06□□□□□ -0.64
TUBB1-201ENST00000217133 TMEM139Q8IV31 216 aa11.06□□□□□ -0.64
TUBB1-201ENST00000217133 CEP112Q8N8E3 955 aa11.06□□□□□ -0.64
TUBB1-201ENST00000217133 AIFM3Q96NN9 605 aa11.06□□□□□ -0.64
TUBB1-201ENST00000217133 PSD3Q9NYI0 1048 aa11.06□□□□□ -0.64
TUBB1-201ENST00000217133 M0R2C6 588 aa11.06□□□□□ -0.64
TUBB1-201ENST00000217133 LONRF3Q496Y0 759 aa11.06□□□□□ -0.64
TUBB1-201ENST00000217133 ZNF790Q6PG37 636 aa11.06□□□□□ -0.64
TUBB1-201ENST00000217133 SRLQ86TD4 932 aa11.06□□□□□ -0.64
TUBB1-201ENST00000217133 TRMT44Q8IYL2 757 aaKnown RBP11.06□□□□□ -0.64
TUBB1-201ENST00000217133 TC2NQ8N9U0 490 aa11.06□□□□□ -0.64
TUBB1-201ENST00000217133 IRX2Q9BZI1 471 aaPredicted RBP11.06□□□□□ -0.64
TUBB1-201ENST00000217133 TATP17735 454 aaPredicted RBP11.05□□□□□ -0.64
TUBB1-201ENST00000217133 SPECC1Q5M775 1068 aa11.05□□□□□ -0.64
TUBB1-201ENST00000217133 MEX3CQ5U5Q3 659 aaKnown RBP11.05□□□□□ -0.64
TUBB1-201ENST00000217133 KRT40Q6A162 431 aa11.05□□□□□ -0.64
TUBB1-201ENST00000217133 PALLDQ8WX93 1383 aa11.05□□□□□ -0.64
TUBB1-201ENST00000217133 ZNF213O14771 459 aa11.05□□□□□ -0.64
TUBB1-201ENST00000217133 PHACTR2O75167 634 aa11.05□□□□□ -0.64
TUBB1-201ENST00000217133 PPP6R2O75170 966 aa11.05□□□□□ -0.64
TUBB1-201ENST00000217133 CDKL5O76039 1030 aa11.05□□□□□ -0.64
TUBB1-201ENST00000217133 RHOXF2BP0C7M4 288 aa11.05□□□□□ -0.64
TUBB1-201ENST00000217133 RXRAP19793 462 aa11.05□□□□□ -0.64
TUBB1-201ENST00000217133 PDE4BQ07343 736 aa11.05□□□□□ -0.64
TUBB1-201ENST00000217133 METTL16Q86W50 562 aaKnown RBP11.05□□□□□ -0.64
TUBB1-201ENST00000217133 TTC5Q8N0Z6 440 aa11.05□□□□□ -0.64
TUBB1-201ENST00000217133 OSBP2Q969R2 916 aa11.05□□□□□ -0.64
TUBB1-201ENST00000217133 RHOXF2Q9BQY4 288 aa11.05□□□□□ -0.64
TUBB1-201ENST00000217133 EFCC1Q9HA90 598 aa11.05□□□□□ -0.64
TUBB1-201ENST00000217133 INTS13Q9NVM9 706 aa11.05□□□□□ -0.64
TUBB1-201ENST00000217133 RAI14Q9P0K7 980 aa11.05□□□□□ -0.64
TUBB1-201ENST00000217133 METAP2P50579 478 aaKnown RBP eCLIP11.05□□□□□ -0.64
TUBB1-201ENST00000217133 ZNF827Q17R98 1081 aa11.05□□□□□ -0.64
TUBB1-201ENST00000217133 HSP90AB3PQ58FF7 597 aa11.05□□□□□ -0.64
TUBB1-201ENST00000217133 ZNF569Q5MCW4 686 aa11.05□□□□□ -0.64
TUBB1-201ENST00000217133 STK11IPQ8N1F8 1099 aa11.05□□□□□ -0.64
TUBB1-201ENST00000217133 KIFC2Q96AC6 838 aa11.05□□□□□ -0.64
TUBB1-201ENST00000217133 ACBD3Q9H3P7 528 aa11.05□□□□□ -0.64
TUBB1-201ENST00000217133 AKR1B15C9JRZ8 316 aaPredicted RBP11.04□□□□□ -0.64
TUBB1-201ENST00000217133 CYP27B1O15528 508 aa11.04□□□□□ -0.64
TUBB1-201ENST00000217133 CUTAO60888 179 aa11.04□□□□□ -0.64
TUBB1-201ENST00000217133 MTF1Q14872 753 aa11.04□□□□□ -0.64
TUBB1-201ENST00000217133 FAM182BQ5T319 152 aa11.04□□□□□ -0.64
TUBB1-201ENST00000217133 CERS3Q8IU89 383 aa11.04□□□□□ -0.64
TUBB1-201ENST00000217133 NFATC2IPQ8NCF5 419 aa11.04□□□□□ -0.64
TUBB1-201ENST00000217133 CDC23Q9UJX2 597 aa11.04□□□□□ -0.64
TUBB1-201ENST00000217133 HPS5Q9UPZ3 1129 aa11.04□□□□□ -0.64
TUBB1-201ENST00000217133 HPSEQ9Y251 543 aa11.04□□□□□ -0.64
TUBB1-201ENST00000217133 FGAP02671 866 aa11.04□□□□□ -0.64
TUBB1-201ENST00000217133 RABL6Q3YEC7 729 aaPredicted RBP11.04□□□□□ -0.64
TUBB1-201ENST00000217133 TTC39AQ5SRH9 613 aa11.04□□□□□ -0.64
TUBB1-201ENST00000217133 RESP18Q5W5W9 173 aa11.04□□□□□ -0.64
TUBB1-201ENST00000217133 NFXL1Q6ZNB6 911 aa11.04□□□□□ -0.64
TUBB1-201ENST00000217133 GBP3Q9H0R5 595 aa11.04□□□□□ -0.64
TUBB1-201ENST00000217133 MRPL44Q9H9J2 332 aaKnown RBP11.04□□□□□ -0.64
TUBB1-201ENST00000217133 FAN1Q9Y2M0 1017 aa11.04□□□□□ -0.64
TUBB1-201ENST00000217133 RGPD5Q99666 1765 aa11.04□□□□□ -0.64
TUBB1-201ENST00000217133 NHSL1Q5SYE7 1610 aa11.04□□□□□ -0.64
TUBB1-201ENST00000217133 ABCC6O95255 1503 aa11.04□□□□□ -0.64
TUBB1-201ENST00000217133 SOWAHDA6NJG2 315 aa11.04□□□□□ -0.64
TUBB1-201ENST00000217133 FOXN1O15353 648 aa11.04□□□□□ -0.64
TUBB1-201ENST00000217133 IL15P40933 162 aaPredicted RBP11.04□□□□□ -0.64
TUBB1-201ENST00000217133 TBX2Q13207 712 aaPredicted RBP11.04□□□□□ -0.64
TUBB1-201ENST00000217133 MICU3Q86XE3 530 aa11.04□□□□□ -0.64
TUBB1-201ENST00000217133 PHKBQ93100 1093 aa11.04□□□□□ -0.64
TUBB1-201ENST00000217133 MEGF6O75095 1541 aa11.03□□□□□ -0.64
TUBB1-201ENST00000217133 COL5A2P05997 1499 aaPredicted RBP11.03□□□□□ -0.64
TUBB1-201ENST00000217133 HEG1Q9ULI3 1381 aa11.03□□□□□ -0.64
TUBB1-201ENST00000217133 A0A1B0GUL7 405 aa11.03□□□□□ -0.64
TUBB1-201ENST00000217133 CDC27P30260 824 aa11.03□□□□□ -0.64
TUBB1-201ENST00000217133 FOXP4Q8IVH2 680 aaPredicted RBP11.03□□□□□ -0.64
TUBB1-201ENST00000217133 KRI1Q8N9T8 703 aaKnown RBP11.03□□□□□ -0.64
TUBB1-201ENST00000217133 RGPD2P0DJD1 1756 aa11.03□□□□□ -0.64
TUBB1-201ENST00000217133 PHLPP1O60346 1717 aa11.03□□□□□ -0.64
TUBB1-201ENST00000217133 CTAGE9A4FU28 777 aa11.03□□□□□ -0.64
TUBB1-201ENST00000217133 MAP2K7O14733 419 aa11.03□□□□□ -0.64
TUBB1-201ENST00000217133 APPP05067 770 aa11.03□□□□□ -0.64
TUBB1-201ENST00000217133 ATP2B1P20020 1258 aa11.03□□□□□ -0.64
TUBB1-201ENST00000217133 IRX3P78415 501 aaPredicted RBP11.03□□□□□ -0.64
TUBB1-201ENST00000217133 POSTNQ15063 836 aa11.03□□□□□ -0.64
TUBB1-201ENST00000217133 KLHL10Q6JEL2 608 aa11.03□□□□□ -0.64
TUBB1-201ENST00000217133 CTR9Q6PD62 1173 aa11.03□□□□□ -0.64
TUBB1-201ENST00000217133 MB21D2Q8IYB1 491 aaPredicted RBP11.03□□□□□ -0.64
TUBB1-201ENST00000217133 MLKLQ8NB16 471 aa11.03□□□□□ -0.64
TUBB1-201ENST00000217133 ABCB6Q9NP58 842 aa11.03□□□□□ -0.64
TUBB1-201ENST00000217133 MAN1B1Q9UKM7 699 aa11.03□□□□□ -0.64
TUBB1-201ENST00000217133 CTAGE15A4D2H0 777 aa11.03□□□□□ -0.64
TUBB1-201ENST00000217133 CTAGE8P0CG41 777 aa11.03□□□□□ -0.64
TUBB1-201ENST00000217133 IARSP41252 1262 aaKnown RBP11.03□□□□□ -0.64
TUBB1-201ENST00000217133 SAFBQ15424 915 aaKnown RBP eCLIP11.03□□□□□ -0.64
TUBB1-201ENST00000217133 BEND6Q5SZJ8 279 aaPredicted RBP11.03□□□□□ -0.64
TUBB1-201ENST00000217133 WWC2Q6AWC2 1192 aa11.03□□□□□ -0.64
TUBB1-201ENST00000217133 CTAGE6Q86UF2 777 aa11.03□□□□□ -0.64
TUBB1-201ENST00000217133 CTAGE4Q8IX94 777 aa11.03□□□□□ -0.64
TUBB1-201ENST00000217133 ZNF496Q96IT1 587 aaPredicted RBP11.03□□□□□ -0.64
TUBB1-201ENST00000217133 SAMSN1Q9NSI8 373 aaKnown RBP11.03□□□□□ -0.64
TUBB1-201ENST00000217133 CEP126Q9P2H0 1117 aa11.03□□□□□ -0.64
TUBB1-201ENST00000217133 IL2RBP14784 551 aa11.02□□□□□ -0.65
TUBB1-201ENST00000217133 FMR1Q06787 632 aaKnown RBP eCLIP11.02□□□□□ -0.65
TUBB1-201ENST00000217133 FAM98CQ17RN3 349 aaKnown RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms