RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 HOOK2Q96ED9 719 aa24.19■■□□□ 1.46
RHBDD3-201ENST00000216085 NACAP1Q9BZK3 213 aa24.19■■□□□ 1.46
RHBDD3-201ENST00000216085 FAM198AQ9UFP1 575 aa24.19■■□□□ 1.46
RHBDD3-201ENST00000216085 FLT1P17948 1338 aa24.19■■□□□ 1.46
RHBDD3-201ENST00000216085 RPAP1Q9BWH6 1393 aaPredicted RBP24.19■■□□□ 1.46
RHBDD3-201ENST00000216085 ADM5C9JUS6 153 aa24.19■■□□□ 1.46
RHBDD3-201ENST00000216085 NF2P35240 595 aa24.19■■□□□ 1.46
RHBDD3-201ENST00000216085 MAPKAPK5Q8IW41 473 aa24.19■■□□□ 1.46
RHBDD3-201ENST00000216085 ZSCAN29Q8IWY8 852 aaPredicted RBP24.19■■□□□ 1.46
RHBDD3-201ENST00000216085 APPP05067 770 aa24.18■■□□□ 1.46
RHBDD3-201ENST00000216085 OSBPL5Q9H0X9 879 aaPredicted RBP24.18■■□□□ 1.46
RHBDD3-201ENST00000216085 DHX36Q9H2U1 1008 aaKnown RBP24.18■■□□□ 1.46
RHBDD3-201ENST00000216085 COL2A1P02458 1487 aaPredicted RBP24.17■■□□□ 1.46
RHBDD3-201ENST00000216085 CNTNAP1P78357 1384 aa24.17■■□□□ 1.46
RHBDD3-201ENST00000216085 SUPT20HL1Q3ZLR7 823 aa24.17■■□□□ 1.46
RHBDD3-201ENST00000216085 SDR42E1Q8WUS8 393 aa24.17■■□□□ 1.46
RHBDD3-201ENST00000216085 DDX4Q9NQI0 724 aaKnown RBP24.17■■□□□ 1.46
RHBDD3-201ENST00000216085 GIMAP6Q6P9H5 292 aa24.16■■□□□ 1.46
RHBDD3-201ENST00000216085 CCDC129Q6ZRS4 1044 aa24.16■■□□□ 1.46
RHBDD3-201ENST00000216085 TMEM39BQ9GZU3 492 aa24.16■■□□□ 1.46
RHBDD3-201ENST00000216085 SCAF8Q9UPN6 1271 aaKnown RBP24.16■■□□□ 1.46
RHBDD3-201ENST00000216085 FOCADQ5VW36 1801 aa24.16■■□□□ 1.46
RHBDD3-201ENST00000216085 POLR2AP24928 1970 aaKnown RBP24.16■■□□□ 1.46
RHBDD3-201ENST00000216085 PATL2C9JE40 543 aaKnown RBP24.15■■□□□ 1.46
RHBDD3-201ENST00000216085 HLA-DOAP06340 250 aa24.15■■□□□ 1.46
RHBDD3-201ENST00000216085 CDCA5Q96FF9 252 aa24.15■■□□□ 1.46
RHBDD3-201ENST00000216085 DCP1AQ9NPI6 582 aaPredicted RBP24.15■■□□□ 1.46
RHBDD3-201ENST00000216085 MCM9Q9NXL9 1143 aa24.15■■□□□ 1.46
RHBDD3-201ENST00000216085 ATRNL1Q5VV63 1379 aa24.15■■□□□ 1.46
RHBDD3-201ENST00000216085 CDK5RAP2Q96SN8 1893 aa24.14■■□□□ 1.46
RHBDD3-201ENST00000216085 PRKAB2O43741 272 aa24.14■■□□□ 1.46
RHBDD3-201ENST00000216085 TDO2P48775 406 aa24.14■■□□□ 1.46
RHBDD3-201ENST00000216085 KIAA1211Q6ZU35 1233 aa24.14■■□□□ 1.46
RHBDD3-201ENST00000216085 ZNF589Q86UQ0 364 aaPredicted RBP24.14■■□□□ 1.46
RHBDD3-201ENST00000216085 CSRNP1Q96S65 589 aa24.14■■□□□ 1.46
RHBDD3-201ENST00000216085 NAV1Q8NEY1 1877 aa24.14■■□□□ 1.45
RHBDD3-201ENST00000216085 SGSM2O43147 1006 aa24.14■■□□□ 1.45
RHBDD3-201ENST00000216085 TTC6Q86TZ1 520 aa24.14■■□□□ 1.45
RHBDD3-201ENST00000216085 ARPP21Q9UBL0 812 aaPredicted RBP24.14■■□□□ 1.45
RHBDD3-201ENST00000216085 POLR3DP05423 398 aaPredicted RBP24.13■■□□□ 1.45
RHBDD3-201ENST00000216085 ESYT1Q9BSJ8 1104 aa24.13■■□□□ 1.45
RHBDD3-201ENST00000216085 NAPBQ9H115 298 aa24.13■■□□□ 1.45
RHBDD3-201ENST00000216085 GSG1L2A8MUP6 293 aa24.12■■□□□ 1.45
RHBDD3-201ENST00000216085 ITGBL1O95965 494 aaPredicted RBP24.12■■□□□ 1.45
RHBDD3-201ENST00000216085 TRIM34Q9BYJ4 488 aa24.12■■□□□ 1.45
RHBDD3-201ENST00000216085 SAP30BPQ9UHR5 308 aaKnown RBP24.12■■□□□ 1.45
RHBDD3-201ENST00000216085 TRAF5O00463 557 aa24.11■■□□□ 1.45
RHBDD3-201ENST00000216085 EIF5BO60841 1220 aaKnown RBP24.11■■□□□ 1.45
RHBDD3-201ENST00000216085 DCAF15Q66K64 600 aa24.11■■□□□ 1.45
RHBDD3-201ENST00000216085 PI4KBQ9UBF8 816 aa24.11■■□□□ 1.45
RHBDD3-201ENST00000216085 MKRN1Q9UHC7 482 aaKnown RBP24.11■■□□□ 1.45
RHBDD3-201ENST00000216085 HSPD1P10809 573 aaKnown RBP24.11■■□□□ 1.45
RHBDD3-201ENST00000216085 ZFPM1Q8IX07 1006 aa24.11■■□□□ 1.45
RHBDD3-201ENST00000216085 IFNL3Q8IZI9 196 aa24.11■■□□□ 1.45
RHBDD3-201ENST00000216085 TEPSINQ96N21 525 aa24.11■■□□□ 1.45
RHBDD3-201ENST00000216085 ZNF408Q9H9D4 720 aa24.11■■□□□ 1.45
RHBDD3-201ENST00000216085 PALD1Q9ULE6 856 aa24.11■■□□□ 1.45
RHBDD3-201ENST00000216085 NBPF12Q5TAG4 269 aaPredicted RBP24.1■■□□□ 1.45
RHBDD3-201ENST00000216085 PRAMEF18Q5VWM3 479 aa24.1■■□□□ 1.45
RHBDD3-201ENST00000216085 DSCC1Q9BVC3 393 aa24.1■■□□□ 1.45
RHBDD3-201ENST00000216085 MYH1P12882 1939 aa24.09■■□□□ 1.45
RHBDD3-201ENST00000216085 DDTLA6NHG4 134 aaPredicted RBP24.09■■□□□ 1.45
RHBDD3-201ENST00000216085 PPP1R12BO60237 982 aaPredicted RBP24.09■■□□□ 1.45
RHBDD3-201ENST00000216085 CRACR2BQ8N4Y2 399 aaPredicted RBP24.09■■□□□ 1.45
RHBDD3-201ENST00000216085 ZMYM6O95789 1325 aa24.09■■□□□ 1.45
RHBDD3-201ENST00000216085 PASKQ96RG2 1323 aa24.09■■□□□ 1.45
RHBDD3-201ENST00000216085 CELF2O95319 508 aaKnown RBP24.08■■□□□ 1.45
RHBDD3-201ENST00000216085 VPS53Q5VIR6 699 aa24.08■■□□□ 1.45
RHBDD3-201ENST00000216085 TAOK2Q9UL54 1235 aa24.08■■□□□ 1.45
RHBDD3-201ENST00000216085 TTLL12Q14166 644 aaPredicted RBP24.08■■□□□ 1.44
RHBDD3-201ENST00000216085 ALX1Q15699 326 aa24.08■■□□□ 1.44
RHBDD3-201ENST00000216085 EPB41L4AQ9HCS5 686 aaPredicted RBP24.08■■□□□ 1.44
RHBDD3-201ENST00000216085 CTNNA3Q9UI47 895 aa24.08■■□□□ 1.44
RHBDD3-201ENST00000216085 HERC5Q9UII4 1024 aaKnown RBP24.08■■□□□ 1.44
RHBDD3-201ENST00000216085 DDX60LQ5H9U9 1706 aaKnown RBP24.08■■□□□ 1.44
RHBDD3-201ENST00000216085 USP17L12C9JPN9 530 aa24.07■■□□□ 1.44
RHBDD3-201ENST00000216085 USP17L21D6R901 530 aa24.07■■□□□ 1.44
RHBDD3-201ENST00000216085 FKBP1BP68106 108 aa24.07■■□□□ 1.44
RHBDD3-201ENST00000216085 SBK1Q52WX2 424 aa24.07■■□□□ 1.44
RHBDD3-201ENST00000216085 SH3BP5LQ7L8J4 393 aa24.07■■□□□ 1.44
RHBDD3-201ENST00000216085 FOXP4Q8IVH2 680 aaPredicted RBP24.07■■□□□ 1.44
RHBDD3-201ENST00000216085 EHD4Q9H223 541 aa24.07■■□□□ 1.44
RHBDD3-201ENST00000216085 ANO2Q9NQ90 1003 aa24.07■■□□□ 1.44
RHBDD3-201ENST00000216085 REC8O95072 547 aa24.06■■□□□ 1.44
RHBDD3-201ENST00000216085 SLC3A2P08195 630 aaKnown RBP24.06■■□□□ 1.44
RHBDD3-201ENST00000216085 SLC4A8Q2Y0W8 1093 aa24.06■■□□□ 1.44
RHBDD3-201ENST00000216085 CTR9Q6PD62 1173 aa24.06■■□□□ 1.44
RHBDD3-201ENST00000216085 C2orf69Q8N8R5 385 aa24.06■■□□□ 1.44
RHBDD3-201ENST00000216085 IL25Q9H293 177 aa24.06■■□□□ 1.44
RHBDD3-201ENST00000216085 SERPINB13Q9UIV8 391 aa24.06■■□□□ 1.44
RHBDD3-201ENST00000216085 DLK2Q6UY11 383 aa24.06■■□□□ 1.44
RHBDD3-201ENST00000216085 ARMC9Q7Z3E5 817 aa24.06■■□□□ 1.44
RHBDD3-201ENST00000216085 CDAN1Q8IWY9 1227 aa24.06■■□□□ 1.44
RHBDD3-201ENST00000216085 ZNF341Q9BYN7 854 aa24.06■■□□□ 1.44
RHBDD3-201ENST00000216085 BAZ2AQ9UIF9 1905 aaKnown RBP24.05■■□□□ 1.44
RHBDD3-201ENST00000216085 MINDY4BA8MYZ0 360 aa24.05■■□□□ 1.44
RHBDD3-201ENST00000216085 C12orf60Q5U649 245 aa24.05■■□□□ 1.44
RHBDD3-201ENST00000216085 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.05■■□□□ 1.445e-6■■■□□ 17
RHBDD3-201ENST00000216085 GBA2Q9HCG7 927 aaPredicted RBP24.05■■□□□ 1.44
RHBDD3-201ENST00000216085 TRPM7Q96QT4 1865 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms