RNA–Protein interactions for RNA: ENST00000216038.5

RTCB-201, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTCB, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-201ENST00000216038 NACAP1Q9BZK3 213 aa11.84□□□□□ -0.51
RTCB-201ENST00000216038 DDX4Q9NQI0 724 aaKnown RBP11.84□□□□□ -0.51
RTCB-201ENST00000216038 GPRC5DQ9NZD1 345 aa11.84□□□□□ -0.51
RTCB-201ENST00000216038 U3KPZ7 1027 aaPredicted RBP11.84□□□□□ -0.51
RTCB-201ENST00000216038 MYH1P12882 1939 aa11.84□□□□□ -0.51
RTCB-201ENST00000216038 ASTN2O75129 1339 aaPredicted RBP11.84□□□□□ -0.51
RTCB-201ENST00000216038 MINDY4BA8MYZ0 360 aa11.84□□□□□ -0.51
RTCB-201ENST00000216038 WNT10BO00744 389 aa11.84□□□□□ -0.51
RTCB-201ENST00000216038 SLC27A2O14975 620 aa11.84□□□□□ -0.51
RTCB-201ENST00000216038 WDHD1O75717 1129 aaPredicted RBP11.84□□□□□ -0.51
RTCB-201ENST00000216038 CYP21A2P08686 494 aa11.84□□□□□ -0.51
RTCB-201ENST00000216038 PLCG2P16885 1265 aa11.84□□□□□ -0.51
RTCB-201ENST00000216038 ZNF280AP59817 542 aaPredicted RBP11.84□□□□□ -0.51
RTCB-201ENST00000216038 MCM9Q9NXL9 1143 aa11.84□□□□□ -0.51
RTCB-201ENST00000216038 FOCADQ5VW36 1801 aa11.83□□□□□ -0.52
RTCB-201ENST00000216038 FLT1P17948 1338 aa11.83□□□□□ -0.52
RTCB-201ENST00000216038 USP17L12C9JPN9 530 aa11.83□□□□□ -0.52
RTCB-201ENST00000216038 USP17L21D6R901 530 aa11.83□□□□□ -0.52
RTCB-201ENST00000216038 H7C1D1 291 aa11.83□□□□□ -0.52
RTCB-201ENST00000216038 CYP2D6P10635 497 aa11.83□□□□□ -0.52
RTCB-201ENST00000216038 CTDSPL2Q05D32 466 aa11.83□□□□□ -0.52
RTCB-201ENST00000216038 COL9A3Q14050 684 aaPredicted RBP11.83□□□□□ -0.52
RTCB-201ENST00000216038 ZFPM1Q8IX07 1006 aa11.83□□□□□ -0.52
RTCB-201ENST00000216038 TRPM4Q8TD43 1214 aa11.83□□□□□ -0.52
RTCB-201ENST00000216038 VEZTQ9HBM0 779 aa11.83□□□□□ -0.52
RTCB-201ENST00000216038 INCENPQ9NQS7 918 aa11.83□□□□□ -0.52
RTCB-201ENST00000216038 SNX14Q9Y5W7 946 aa11.83□□□□□ -0.52
RTCB-201ENST00000216038 NAV1Q8NEY1 1877 aa11.83□□□□□ -0.52
RTCB-201ENST00000216038 POLR2AP24928 1970 aaKnown RBP11.83□□□□□ -0.52
RTCB-201ENST00000216038 GLTPD2A6NH11 291 aa11.82□□□□□ -0.52
RTCB-201ENST00000216038 TCP10L2B9ZVM9 353 aa11.82□□□□□ -0.52
RTCB-201ENST00000216038 MCCP23508 829 aa11.82□□□□□ -0.52
RTCB-201ENST00000216038 RBM25P49756 843 aaKnown RBP11.82□□□□□ -0.52
RTCB-201ENST00000216038 KIF4BQ2VIQ3 1234 aa11.82□□□□□ -0.52
RTCB-201ENST00000216038 ADCK5Q3MIX3 580 aa11.82□□□□□ -0.52
RTCB-201ENST00000216038 CTR9Q6PD62 1173 aa11.82□□□□□ -0.52
RTCB-201ENST00000216038 ATP8A2Q9NTI2 1148 aa11.82□□□□□ -0.52
RTCB-201ENST00000216038 ZNF213O14771 459 aa11.82□□□□□ -0.52
RTCB-201ENST00000216038 LMOD1P29536 600 aaPredicted RBP11.82□□□□□ -0.52
RTCB-201ENST00000216038 IMMTQ16891 758 aaKnown RBP11.82□□□□□ -0.52
RTCB-201ENST00000216038 NAP1L5Q96NT1 182 aaPredicted RBP11.82□□□□□ -0.52
RTCB-201ENST00000216038 KIF2CQ99661 725 aa11.82□□□□□ -0.52
RTCB-201ENST00000216038 NBPF3Q9H094 633 aa11.82□□□□□ -0.52
RTCB-201ENST00000216038 ZNF70Q9UC06 446 aaPredicted RBP11.82□□□□□ -0.52
RTCB-201ENST00000216038 FAM198AQ9UFP1 575 aa11.82□□□□□ -0.52
RTCB-201ENST00000216038 MKRN1Q9UHC7 482 aaKnown RBP11.82□□□□□ -0.52
RTCB-201ENST00000216038 CTNNA3Q9UI47 895 aa11.82□□□□□ -0.52
RTCB-201ENST00000216038 CPA1P15085 419 aa11.81□□□□□ -0.52
RTCB-201ENST00000216038 ZKSCAN1P17029 563 aaPredicted RBP11.81□□□□□ -0.52
RTCB-201ENST00000216038 ALX1Q15699 326 aa11.81□□□□□ -0.52
RTCB-201ENST00000216038 RNF20Q5VTR2 975 aa11.81□□□□□ -0.52
RTCB-201ENST00000216038 ZNF526Q8TF50 670 aaPredicted RBP11.81□□□□□ -0.52
RTCB-201ENST00000216038 ZBED3Q96IU2 234 aaPredicted RBP11.81□□□□□ -0.52
RTCB-201ENST00000216038 MYO1BO43795 1136 aa11.81□□□□□ -0.52
RTCB-201ENST00000216038 POLR3DP05423 398 aaPredicted RBP11.81□□□□□ -0.52
RTCB-201ENST00000216038 SLURP2P0DP57 97 aa11.81□□□□□ -0.52
RTCB-201ENST00000216038 PLCD1P51178 756 aa11.81□□□□□ -0.52
RTCB-201ENST00000216038 HIRAP54198 1017 aaPredicted RBP11.81□□□□□ -0.52
RTCB-201ENST00000216038 SPDYE2Q495Y8 402 aa11.81□□□□□ -0.52
RTCB-201ENST00000216038 STOX1Q6ZVD7 989 aa11.81□□□□□ -0.52
RTCB-201ENST00000216038 CERS3Q8IU89 383 aa11.81□□□□□ -0.52
RTCB-201ENST00000216038 TBC1D10CQ8IV04 446 aa11.81□□□□□ -0.52
RTCB-201ENST00000216038 MTMR14Q8NCE2 650 aa11.81□□□□□ -0.52
RTCB-201ENST00000216038 UPF3BQ9BZI7 483 aaKnown RBP11.81□□□□□ -0.52
RTCB-201ENST00000216038 LAMA4Q16363 1823 aa11.8□□□□□ -0.52
RTCB-201ENST00000216038 EPB41L2O43491 1005 aaKnown RBP11.8□□□□□ -0.52
RTCB-201ENST00000216038 PPARAQ07869 468 aa11.8□□□□□ -0.52
RTCB-201ENST00000216038 GIMAP6Q6P9H5 292 aa11.8□□□□□ -0.52
RTCB-201ENST00000216038 ZSCAN29Q8IWY8 852 aaPredicted RBP11.8□□□□□ -0.52
RTCB-201ENST00000216038 DYNLL2Q96FJ2 89 aa11.8□□□□□ -0.52
RTCB-201ENST00000216038 JAKMIP1Q96N16 626 aaKnown RBP11.8□□□□□ -0.52
RTCB-201ENST00000216038 PDCL3Q9H2J4 239 aa11.8□□□□□ -0.52
RTCB-201ENST00000216038 TMOD2Q9NZR1 351 aa11.8□□□□□ -0.52
RTCB-201ENST00000216038 HACL1Q9UJ83 578 aa11.8□□□□□ -0.52
RTCB-201ENST00000216038 TACC3Q9Y6A5 838 aa11.8□□□□□ -0.52
RTCB-201ENST00000216038 ZC3H4Q9UPT8 1303 aaKnown RBP11.8□□□□□ -0.52
RTCB-201ENST00000216038 RPAP1Q9BWH6 1393 aaPredicted RBP11.79□□□□□ -0.52
RTCB-201ENST00000216038 DDTLA6NHG4 134 aaPredicted RBP11.79□□□□□ -0.52
RTCB-201ENST00000216038 E7EWF7 191 aa11.79□□□□□ -0.52
RTCB-201ENST00000216038 PRDM1O75626 825 aa11.79□□□□□ -0.52
RTCB-201ENST00000216038 CDAN1Q8IWY9 1227 aa11.79□□□□□ -0.52
RTCB-201ENST00000216038 NKX2-3Q8TAU0 364 aa11.79□□□□□ -0.52
RTCB-201ENST00000216038 IDI2Q9BXS1 227 aa11.79□□□□□ -0.52
RTCB-201ENST00000216038 OSBPL5Q9H0X9 879 aaPredicted RBP11.79□□□□□ -0.52
RTCB-201ENST00000216038 TOMM22Q9NS69 142 aa11.79□□□□□ -0.52
RTCB-201ENST00000216038 LAMB1P07942 1786 aa11.79□□□□□ -0.52
RTCB-201ENST00000216038 DDX60LQ5H9U9 1706 aaKnown RBP11.79□□□□□ -0.52
RTCB-201ENST00000216038 CASTP20810 708 aaKnown RBP11.79□□□□□ -0.52
RTCB-201ENST00000216038 RRP12Q5JTH9 1297 aaKnown RBP11.79□□□□□ -0.52
RTCB-201ENST00000216038 C12orf60Q5U649 245 aa11.79□□□□□ -0.52
RTCB-201ENST00000216038 ANGEL2Q5VTE6 544 aaKnown RBP11.79□□□□□ -0.52
RTCB-201ENST00000216038 SH3BP5LQ7L8J4 393 aa11.79□□□□□ -0.52
RTCB-201ENST00000216038 L3MBTL3Q96JM7 780 aaPredicted RBP11.79□□□□□ -0.52
RTCB-201ENST00000216038 TCEANC2Q96MN5 208 aa11.79□□□□□ -0.52
RTCB-201ENST00000216038 TMEM39BQ9GZU3 492 aa11.79□□□□□ -0.52
RTCB-201ENST00000216038 ADARB2Q9NS39 739 aaKnown RBP11.79□□□□□ -0.52
RTCB-201ENST00000216038 ARPP21Q9UBL0 812 aaPredicted RBP11.79□□□□□ -0.52
RTCB-201ENST00000216038 ZMYM6O95789 1325 aa11.78□□□□□ -0.52
RTCB-201ENST00000216038 FAM196BA6NMK8 535 aa11.78□□□□□ -0.52
RTCB-201ENST00000216038 POTECB2RU33 542 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms