RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 ANKRD35Q8N283 1001 aa3.84□□□□□ -1.8
NEB-201ENST00000172853 TTLL3Q9Y4R7 772 aa3.84□□□□□ -1.8
NEB-201ENST00000172853 FANCD2Q9BXW9 1451 aa3.84□□□□□ -1.8
NEB-201ENST00000172853 ZNF233A6NK53 670 aa3.84□□□□□ -1.8
NEB-201ENST00000172853 CTR9Q6PD62 1173 aa3.84□□□□□ -1.8
NEB-201ENST00000172853 NR1H4Q96RI1 486 aaPredicted RBP3.84□□□□□ -1.8
NEB-201ENST00000172853 CTAGE1Q96RT6 745 aa3.84□□□□□ -1.8
NEB-201ENST00000172853 TLR3O15455 904 aaKnown RBP3.84□□□□□ -1.8
NEB-201ENST00000172853 AKR1B10O60218 316 aa3.84□□□□□ -1.8
NEB-201ENST00000172853 EPB41P11171 864 aaKnown RBP3.84□□□□□ -1.8
NEB-201ENST00000172853 ZNF467Q7Z7K2 595 aaPredicted RBP3.84□□□□□ -1.8
NEB-201ENST00000172853 BCS1LQ9Y276 419 aa3.84□□□□□ -1.8
NEB-201ENST00000172853 SRPRBQ9Y5M8 271 aaKnown RBP3.84□□□□□ -1.8
NEB-201ENST00000172853 SMARCA5O60264 1052 aaPredicted RBP3.83□□□□□ -1.8
NEB-201ENST00000172853 CTAGE6Q86UF2 777 aa3.83□□□□□ -1.8
NEB-201ENST00000172853 ZBTB8OSQ8IWT0 167 aa3.83□□□□□ -1.8
NEB-201ENST00000172853 KCNG4Q8TDN1 519 aa3.83□□□□□ -1.8
NEB-201ENST00000172853 OLFML3Q9NRN5 406 aa3.83□□□□□ -1.8
NEB-201ENST00000172853 SUCLA2Q9P2R7 463 aaPredicted RBP3.83□□□□□ -1.8
NEB-201ENST00000172853 IQSEC3Q9UPP2 1182 aaPredicted RBP3.83□□□□□ -1.8
NEB-201ENST00000172853 TRPC6Q9Y210 931 aa3.83□□□□□ -1.8
NEB-201ENST00000172853 RFC1P35251 1148 aaPredicted RBP3.83□□□□□ -1.8
NEB-201ENST00000172853 KRT9P35527 623 aa3.83□□□□□ -1.8
NEB-201ENST00000172853 UBN1Q9NPG3 1134 aa3.83□□□□□ -1.8
NEB-201ENST00000172853 SP4Q02446 784 aa3.83□□□□□ -1.8
NEB-201ENST00000172853 GRIN1Q05586 938 aa3.83□□□□□ -1.8
NEB-201ENST00000172853 DNAJC21Q5F1R6 531 aaKnown RBP3.83□□□□□ -1.8
NEB-201ENST00000172853 IPO4Q8TEX9 1081 aaKnown RBP3.83□□□□□ -1.8
NEB-201ENST00000172853 HAUS1Q96CS2 278 aa3.83□□□□□ -1.8
NEB-201ENST00000172853 SYF2O95926 243 aaKnown RBP3.83□□□□□ -1.8
NEB-201ENST00000172853 PUM3Q15397 648 aaKnown RBP3.83□□□□□ -1.8
NEB-201ENST00000172853 SEPT14Q6ZU15 432 aa3.83□□□□□ -1.8
NEB-201ENST00000172853 PBRM1Q86U86 1689 aa3.83□□□□□ -1.8
NEB-201ENST00000172853 PPFIA4O75335 1185 aa3.83□□□□□ -1.8
NEB-201ENST00000172853 CNGA4Q8IV77 575 aa3.83□□□□□ -1.8
NEB-201ENST00000172853 RNF214Q8ND24 703 aa3.83□□□□□ -1.8
NEB-201ENST00000172853 ENOX1Q8TC92 643 aaKnown RBP3.83□□□□□ -1.8
NEB-201ENST00000172853 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.83□□□□□ -1.8
NEB-201ENST00000172853 SMCO2A6NFE2 343 aa3.83□□□□□ -1.8
NEB-201ENST00000172853 TNFAIP3P21580 790 aa3.83□□□□□ -1.8
NEB-201ENST00000172853 TRIM47Q96LD4 638 aa3.83□□□□□ -1.8
NEB-201ENST00000172853 PPANQ9NQ55 473 aaKnown RBP3.83□□□□□ -1.8
NEB-201ENST00000172853 DYRK4Q9NR20 520 aa3.83□□□□□ -1.8
NEB-201ENST00000172853 GPTP24298 496 aa3.83□□□□□ -1.8
NEB-201ENST00000172853 LMBR1LQ6UX01 489 aa3.83□□□□□ -1.8
NEB-201ENST00000172853 TRIM50Q86XT4 487 aa3.83□□□□□ -1.8
NEB-201ENST00000172853 PGBD3Q8N328 593 aa3.83□□□□□ -1.8
NEB-201ENST00000172853 ANKRD24Q8TF21 1146 aa3.83□□□□□ -1.8
NEB-201ENST00000172853 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.83□□□□□ -1.8
NEB-201ENST00000172853 IPO5O00410 1097 aaKnown RBP3.83□□□□□ -1.8
NEB-201ENST00000172853 ANXA13P27216 316 aa3.83□□□□□ -1.8
NEB-201ENST00000172853 RECQLP46063 649 aaPredicted RBP3.83□□□□□ -1.8
NEB-201ENST00000172853 CAPZA3Q96KX2 299 aa3.83□□□□□ -1.8
NEB-201ENST00000172853 CLSTN2Q9H4D0 955 aa3.83□□□□□ -1.8
NEB-201ENST00000172853 CYP7A1P22680 504 aa3.83□□□□□ -1.8
NEB-201ENST00000172853 RXRBP28702 533 aa3.83□□□□□ -1.8
NEB-201ENST00000172853 MAN1A1P33908 653 aa3.83□□□□□ -1.8
NEB-201ENST00000172853 TTC23LQ6PF05 361 aa3.83□□□□□ -1.8
NEB-201ENST00000172853 RGL1Q9NZL6 768 aa3.83□□□□□ -1.8
NEB-201ENST00000172853 GOLGA8QA0A0J9YX86 632 aa3.83□□□□□ -1.8
NEB-201ENST00000172853 GOLGA8OA6NCC3 632 aa3.83□□□□□ -1.8
NEB-201ENST00000172853 CCDC169A6NNP5 214 aa3.83□□□□□ -1.8
NEB-201ENST00000172853 GOLGA8NF8WBI6 632 aa3.83□□□□□ -1.8
NEB-201ENST00000172853 APBA3O96018 575 aa3.83□□□□□ -1.8
NEB-201ENST00000172853 GNPTABQ3T906 1256 aa3.83□□□□□ -1.8
NEB-201ENST00000172853 RABEP2Q9H5N1 569 aa3.83□□□□□ -1.8
NEB-201ENST00000172853 ASPHQ12797 758 aa3.83□□□□□ -1.8
NEB-201ENST00000172853 EFHBQ8N7U6 833 aa3.83□□□□□ -1.8
NEB-201ENST00000172853 NEK1Q96PY6 1258 aa3.83□□□□□ -1.8
NEB-201ENST00000172853 TEX28O15482 410 aa3.83□□□□□ -1.8
NEB-201ENST00000172853 CALUO43852 315 aaPredicted RBP3.83□□□□□ -1.8
NEB-201ENST00000172853 SLC52A1Q9NWF4 448 aa3.83□□□□□ -1.8
NEB-201ENST00000172853 JRKLQ9Y4A0 524 aa3.83□□□□□ -1.8
NEB-201ENST00000172853 BICDL2A1A5D9 508 aa3.83□□□□□ -1.8
NEB-201ENST00000172853 TMPOP42166 694 aaKnown RBP3.83□□□□□ -1.8
NEB-201ENST00000172853 DDX27Q96GQ7 796 aaKnown RBP3.83□□□□□ -1.8
NEB-201ENST00000172853 MAP3K7CLP57077 242 aa3.83□□□□□ -1.8
NEB-201ENST00000172853 MCTP2Q6DN12 878 aa3.83□□□□□ -1.8
NEB-201ENST00000172853 UHRF1BP1Q6BDS2 1440 aa3.83□□□□□ -1.8
NEB-201ENST00000172853 ZBTB22O15209 634 aa3.83□□□□□ -1.8
NEB-201ENST00000172853 PSMD2Q13200 908 aa3.83□□□□□ -1.8
NEB-201ENST00000172853 RAB3GAP1Q15042 981 aa3.83□□□□□ -1.8
NEB-201ENST00000172853 WWC3Q9ULE0 1092 aa3.83□□□□□ -1.8
NEB-201ENST00000172853 LMNB1P20700 586 aa3.83□□□□□ -1.8
NEB-201ENST00000172853 YIPF2Q9BWQ6 316 aa3.83□□□□□ -1.8
NEB-201ENST00000172853 ZW10O43264 779 aa3.82□□□□□ -1.8
NEB-201ENST00000172853 MYCLP12524 364 aaPredicted RBP3.82□□□□□ -1.8
NEB-201ENST00000172853 LUC7L2Q9Y383 392 aaKnown RBP3.82□□□□□ -1.8
NEB-201ENST00000172853 TNNC2P02585 160 aa3.82□□□□□ -1.8
NEB-201ENST00000172853 KRT19P08727 400 aa3.82□□□□□ -1.8
NEB-201ENST00000172853 GARSP41250 739 aaKnown RBP3.82□□□□□ -1.8
NEB-201ENST00000172853 EIF4G3O43432 1585 aaKnown RBP3.82□□□□□ -1.8
NEB-201ENST00000172853 PPP1R2P41236 205 aa3.82□□□□□ -1.8
NEB-201ENST00000172853 IFRD2Q12894 506 aaPredicted RBP3.82□□□□□ -1.8
NEB-201ENST00000172853 E2F5Q15329 346 aa3.82□□□□□ -1.8
NEB-201ENST00000172853 SDE2Q6IQ49 451 aa3.82□□□□□ -1.8
NEB-201ENST00000172853 C16orf62Q7Z3J2 963 aa3.82□□□□□ -1.8
NEB-201ENST00000172853 PPP4R1Q8TF05 950 aa3.82□□□□□ -1.8
NEB-201ENST00000172853 PLCB1Q9NQ66 1216 aa3.82□□□□□ -1.8
NEB-201ENST00000172853 KCNH4Q9UQ05 1017 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms