RNA–Protein interactions for RNA: ENST00000157600.7

LMCD1-201, Transcript of LIM and cysteine rich domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMCD1, Length 8,405 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-201ENST00000157600 NEO1Q92859 1461 aa14.04□□□□□ -0.16
LMCD1-201ENST00000157600 MTMR3Q13615 1198 aa14.04□□□□□ -0.16
LMCD1-201ENST00000157600 SLC9C1Q4G0N8 1177 aa14.04□□□□□ -0.16
LMCD1-201ENST00000157600 RSRC1Q96IZ7 334 aaKnown RBP14.04□□□□□ -0.16
LMCD1-201ENST00000157600 TCHPQ9BT92 498 aa14.04□□□□□ -0.16
LMCD1-201ENST00000157600 KDM5CP41229 1560 aa14.04□□□□□ -0.16
LMCD1-201ENST00000157600 ZNF569Q5MCW4 686 aa14.04□□□□□ -0.16
LMCD1-201ENST00000157600 TICAM2Q86XR7 235 aa14.04□□□□□ -0.16
LMCD1-201ENST00000157600 CLSTN2Q9H4D0 955 aa14.04□□□□□ -0.16
LMCD1-201ENST00000157600 ARHGAP25P42331 645 aa14.04□□□□□ -0.16
LMCD1-201ENST00000157600 KDM2BQ8NHM5 1336 aa14.04□□□□□ -0.16
LMCD1-201ENST00000157600 GMNNO75496 209 aa14.04□□□□□ -0.16
LMCD1-201ENST00000157600 IGSF22Q8N9C0 903 aa14.04□□□□□ -0.16
LMCD1-201ENST00000157600 PARP2Q9UGN5 583 aa14.04□□□□□ -0.16
LMCD1-201ENST00000157600 FYB2Q5VWT5 728 aa14.03□□□□□ -0.16
LMCD1-201ENST00000157600 SPDYE4A6NLX3 237 aa14.03□□□□□ -0.16
LMCD1-201ENST00000157600 CHMP4BP1P59074 171 aa14.03□□□□□ -0.16
LMCD1-201ENST00000157600 APOBRQ0VD83 1088 aa14.03□□□□□ -0.16
LMCD1-201ENST00000157600 TFCP2Q12800 502 aa14.03□□□□□ -0.16
LMCD1-201ENST00000157600 RBM17Q96I25 401 aaKnown RBP14.03□□□□□ -0.16
LMCD1-201ENST00000157600 PREX2Q70Z35 1606 aa14.03□□□□□ -0.16
LMCD1-201ENST00000157600 PPP2R3AQ06190 1150 aa14.03□□□□□ -0.16
LMCD1-201ENST00000157600 MAIP1Q8WWC4 291 aa14.03□□□□□ -0.16
LMCD1-201ENST00000157600 RSPH14Q9UHP6 348 aa14.03□□□□□ -0.16
LMCD1-201ENST00000157600 LRRC2Q9BYS8 371 aa14.03□□□□□ -0.16
LMCD1-201ENST00000157600 KDM3AQ9Y4C1 1321 aa14.03□□□□□ -0.16
LMCD1-201ENST00000157600 SGSM2O43147 1006 aa14.03□□□□□ -0.16
LMCD1-201ENST00000157600 BCRP11274 1271 aa14.03□□□□□ -0.16
LMCD1-201ENST00000157600 GABPB1Q06547 395 aaPredicted RBP14.03□□□□□ -0.16
LMCD1-201ENST00000157600 PPFIA1Q13136 1202 aa14.03□□□□□ -0.16
LMCD1-201ENST00000157600 KRT25Q7Z3Z0 450 aa14.03□□□□□ -0.16
LMCD1-201ENST00000157600 TBC1D22AQ8WUA7 517 aa14.03□□□□□ -0.16
LMCD1-201ENST00000157600 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.03□□□□□ -0.16
LMCD1-201ENST00000157600 NOL3O60936 208 aaKnown RBP14.03□□□□□ -0.16
LMCD1-201ENST00000157600 ARHGAP24Q8N264 748 aa14.03□□□□□ -0.16
LMCD1-201ENST00000157600 NOC4LQ9BVI4 516 aaKnown RBP14.03□□□□□ -0.16
LMCD1-201ENST00000157600 TBX22Q9Y458 520 aa14.03□□□□□ -0.16
LMCD1-201ENST00000157600 SH3TC1Q8TE82 1336 aa14.03□□□□□ -0.16
LMCD1-201ENST00000157600 TSPOAP1O95153 1857 aa14.03□□□□□ -0.16
LMCD1-201ENST00000157600 PLCB3Q01970 1234 aa14.03□□□□□ -0.16
LMCD1-201ENST00000157600 NT5C3AQ9H0P0 336 aa14.03□□□□□ -0.16
LMCD1-201ENST00000157600 ZNF790Q6PG37 636 aa14.02□□□□□ -0.16
LMCD1-201ENST00000157600 KBTBD3Q8NAB2 608 aa14.02□□□□□ -0.16
LMCD1-201ENST00000157600 JDP2Q8WYK2 163 aa14.02□□□□□ -0.16
LMCD1-201ENST00000157600 SH3BGRP55822 239 aaPredicted RBP14.02□□□□□ -0.16
LMCD1-201ENST00000157600 DSCC1Q9BVC3 393 aa14.02□□□□□ -0.16
LMCD1-201ENST00000157600 TET3O43151 1660 aa14.02□□□□□ -0.16
LMCD1-201ENST00000157600 MRPS9P82933 396 aaKnown RBP14.02□□□□□ -0.16
LMCD1-201ENST00000157600 PAK1Q13153 545 aa14.02□□□□□ -0.16
LMCD1-201ENST00000157600 TTC31Q49AM3 519 aaPredicted RBP14.02□□□□□ -0.16
LMCD1-201ENST00000157600 CFAP157Q5JU67 520 aa14.02□□□□□ -0.16
LMCD1-201ENST00000157600 PAIP2Q9BPZ3 127 aaKnown RBP14.02□□□□□ -0.16
LMCD1-201ENST00000157600 GBP1P32455 592 aa14.02□□□□□ -0.17
LMCD1-201ENST00000157600 ATP11AP98196 1134 aa14.02□□□□□ -0.17
LMCD1-201ENST00000157600 TNNI3KQ59H18 835 aa14.02□□□□□ -0.17
LMCD1-201ENST00000157600 FPGT-TNNI3KV9GXZ4 949 aa14.02□□□□□ -0.17
LMCD1-201ENST00000157600 C8orf74Q6P047 294 aa14.02□□□□□ -0.17
LMCD1-201ENST00000157600 ERCC5P28715 1186 aaPredicted RBP14.02□□□□□ -0.17
LMCD1-201ENST00000157600 GALNT17Q6IS24 598 aa14.02□□□□□ -0.17
LMCD1-201ENST00000157600 TBC1D8BQ0IIM8 1120 aa14.02□□□□□ -0.17
LMCD1-201ENST00000157600 LRRC59Q96AG4 307 aaKnown RBP14.02□□□□□ -0.17
LMCD1-201ENST00000157600 VWA3AA6NCI4 1184 aa14.01□□□□□ -0.17
LMCD1-201ENST00000157600 CETN3O15182 167 aa14.01□□□□□ -0.17
LMCD1-201ENST00000157600 SPATS2Q86XZ4 545 aaKnown RBP14.01□□□□□ -0.17
LMCD1-201ENST00000157600 AFAP1L1Q8TED9 768 aa14.01□□□□□ -0.17
LMCD1-201ENST00000157600 LZTFL1Q9NQ48 299 aa14.01□□□□□ -0.17
LMCD1-201ENST00000157600 PRDM10Q9NQV6 1147 aa14.01□□□□□ -0.17
LMCD1-201ENST00000157600 SLC27A2O14975 620 aa14.01□□□□□ -0.17
LMCD1-201ENST00000157600 NT5C2P49902 561 aa14.01□□□□□ -0.17
LMCD1-201ENST00000157600 GTF2A1P52655 376 aaPredicted RBP14.01□□□□□ -0.17
LMCD1-201ENST00000157600 BRDTQ58F21 947 aaPredicted RBP14.01□□□□□ -0.17
LMCD1-201ENST00000157600 TMX1Q9H3N1 280 aa14.01□□□□□ -0.17
LMCD1-201ENST00000157600 MAGEF1Q9HAY2 307 aa14.01□□□□□ -0.17
LMCD1-201ENST00000157600 HOXC9P31274 260 aa14.01□□□□□ -0.17
LMCD1-201ENST00000157600 CCDC114Q96M63 670 aa14.01□□□□□ -0.17
LMCD1-201ENST00000157600 VPS18Q9P253 973 aa14.01□□□□□ -0.17
LMCD1-201ENST00000157600 TRAF5O00463 557 aa14.01□□□□□ -0.17
LMCD1-201ENST00000157600 GCP02774 474 aa14.01□□□□□ -0.17
LMCD1-201ENST00000157600 DNAJC21Q5F1R6 531 aaKnown RBP14.01□□□□□ -0.17
LMCD1-201ENST00000157600 STMN2Q93045 179 aa14.01□□□□□ -0.17
LMCD1-201ENST00000157600 CHL1O00533 1208 aa14.01□□□□□ -0.17
LMCD1-201ENST00000157600 PDE8AO60658 829 aa14.01□□□□□ -0.17
LMCD1-201ENST00000157600 LGSNQ5TDP6 509 aa14.01□□□□□ -0.17
LMCD1-201ENST00000157600 CCDC63Q8NA47 563 aa14.01□□□□□ -0.17
LMCD1-201ENST00000157600 FNBP1Q96RU3 617 aa14.01□□□□□ -0.17
LMCD1-201ENST00000157600 CFAP221Q4G0U5 840 aa14□□□□□ -0.17
LMCD1-201ENST00000157600 TRIML1Q8N9V2 468 aa14□□□□□ -0.17
LMCD1-201ENST00000157600 GOLGA5Q8TBA6 731 aa14□□□□□ -0.17
LMCD1-201ENST00000157600 SPHKAPQ2M3C7 1700 aa14□□□□□ -0.17
LMCD1-201ENST00000157600 SRGAP1Q7Z6B7 1085 aa14□□□□□ -0.17
LMCD1-201ENST00000157600 CCDC117Q8IWD4 279 aaPredicted RBP14□□□□□ -0.17
LMCD1-201ENST00000157600 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14□□□□□ -0.17
LMCD1-201ENST00000157600 CIB2O75838 187 aa14□□□□□ -0.17
LMCD1-201ENST00000157600 RASSF2P50749 326 aa14□□□□□ -0.17
LMCD1-201ENST00000157600 PPFIBP2Q8ND30 876 aa14□□□□□ -0.17
LMCD1-201ENST00000157600 FAM169AQ9Y6X4 670 aa14□□□□□ -0.17
LMCD1-201ENST00000157600 MYOM2P54296 1465 aa14□□□□□ -0.17
LMCD1-201ENST00000157600 ATP7BP35670 1465 aa14□□□□□ -0.17
LMCD1-201ENST00000157600 INTS8Q75QN2 995 aaKnown RBP14□□□□□ -0.17
LMCD1-201ENST00000157600 ZKSCAN3Q9BRR0 538 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms