RNA–Protein interactions for RNA: ENST00000013034.3

NME1-201, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 3 BASIC

Gene NME1, Length 796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-201ENST00000013034 SEMA3EO15041 775 aa13.92□□□□□ -0.18
NME1-201ENST00000013034 ZBTB7BO15156 539 aaPredicted RBP13.92□□□□□ -0.18
NME1-201ENST00000013034 ZBTB22O15209 634 aa13.92□□□□□ -0.18
NME1-201ENST00000013034 ADCY3O60266 1144 aa13.92□□□□□ -0.18
NME1-201ENST00000013034 ENTPD3O75355 529 aa13.92□□□□□ -0.18
NME1-201ENST00000013034 RFX5P48382 616 aaPredicted RBP13.92□□□□□ -0.18
NME1-201ENST00000013034 IRF5Q13568 498 aa13.92□□□□□ -0.18
NME1-201ENST00000013034 MRPL50Q8N5N7 158 aaKnown RBP13.92□□□□□ -0.18
NME1-201ENST00000013034 PXYLP1Q8TE99 480 aa13.92□□□□□ -0.18
NME1-201ENST00000013034 IDI2Q9BXS1 227 aa13.92□□□□□ -0.18
NME1-201ENST00000013034 USP44Q9H0E7 712 aa13.92□□□□□ -0.18
NME1-201ENST00000013034 UNC93B1Q9H1C4 597 aa13.92□□□□□ -0.18
NME1-201ENST00000013034 USP40Q9NVE5 1235 aa13.92□□□□□ -0.18
NME1-201ENST00000013034 FBXO3Q9UK99 471 aa13.92□□□□□ -0.18
NME1-201ENST00000013034 GABRQQ9UN88 632 aa13.92□□□□□ -0.18
NME1-201ENST00000013034 PHF20L1A8MW92 1017 aa13.91□□□□□ -0.18
NME1-201ENST00000013034 SGPL1O95470 568 aa13.91□□□□□ -0.18
NME1-201ENST00000013034 PTPRAP18433 802 aa13.91□□□□□ -0.18
NME1-201ENST00000013034 ATP2B3Q16720 1220 aa13.91□□□□□ -0.18
NME1-201ENST00000013034 ZGPATQ8N5A5 531 aaKnown RBP13.91□□□□□ -0.18
NME1-201ENST00000013034 DENND2AQ9ULE3 1009 aa13.91□□□□□ -0.18
NME1-201ENST00000013034 GAKO14976 1311 aa13.9□□□□□ -0.18
NME1-201ENST00000013034 ZNF521Q96K83 1311 aa13.9□□□□□ -0.18
NME1-201ENST00000013034 TNPO2O14787 897 aaKnown RBP13.9□□□□□ -0.18
NME1-201ENST00000013034 CIAO1O76071 339 aa13.9□□□□□ -0.18
NME1-201ENST00000013034 INHAP05111 366 aa13.9□□□□□ -0.18
NME1-201ENST00000013034 FLT3LGP49771 235 aa13.9□□□□□ -0.18
NME1-201ENST00000013034 RGS3P49796 1198 aa13.9□□□□□ -0.18
NME1-201ENST00000013034 GADL1Q6ZQY3 521 aa13.9□□□□□ -0.18
NME1-201ENST00000013034 ATG9AQ7Z3C6 839 aa13.9□□□□□ -0.18
NME1-201ENST00000013034 SMCR8Q8TEV9 937 aaPredicted RBP13.9□□□□□ -0.18
NME1-201ENST00000013034 AFG3L2Q9Y4W6 797 aa13.9□□□□□ -0.18
NME1-201ENST00000013034 ZHX2Q9Y6X8 837 aa13.9□□□□□ -0.18
NME1-201ENST00000013034 DOCK1Q14185 1865 aa13.89□□□□□ -0.19
NME1-201ENST00000013034 EVI5O60447 810 aa13.89□□□□□ -0.19
NME1-201ENST00000013034 ELNP15502 786 aa13.89□□□□□ -0.19
NME1-201ENST00000013034 ZFPM1Q8IX07 1006 aa13.89□□□□□ -0.19
NME1-201ENST00000013034 PAK6Q9NQU5 681 aaPredicted RBP13.89□□□□□ -0.19
NME1-201ENST00000013034 AGTPBP1Q9UPW5 1226 aa13.89□□□□□ -0.19
NME1-201ENST00000013034 LRRFIP2Q9Y608 721 aaKnown RBP13.89□□□□□ -0.19
NME1-201ENST00000013034 MGAMO43451 1857 aa13.89□□□□□ -0.19
NME1-201ENST00000013034 PDS5AQ29RF7 1337 aaKnown RBP13.89□□□□□ -0.19
NME1-201ENST00000013034 CTNND1O60716 968 aaKnown RBP13.88□□□□□ -0.19
NME1-201ENST00000013034 MAP3K10Q02779 954 aa13.88□□□□□ -0.19
NME1-201ENST00000013034 FAM110CQ1W6H9 321 aa13.88□□□□□ -0.19
NME1-201ENST00000013034 DZIP1Q86YF9 867 aaKnown RBP13.88□□□□□ -0.19
NME1-201ENST00000013034 ZSCAN29Q8IWY8 852 aaPredicted RBP13.88□□□□□ -0.19
NME1-201ENST00000013034 SLF2Q8IX21 1173 aa13.88□□□□□ -0.19
NME1-201ENST00000013034 DEFB118Q96PH6 123 aa13.88□□□□□ -0.19
NME1-201ENST00000013034 CEP126Q9P2H0 1117 aa13.88□□□□□ -0.19
NME1-201ENST00000013034 PNMA3Q9UL41 463 aa13.88□□□□□ -0.19
NME1-201ENST00000013034 PHKA1P46020 1223 aa13.87□□□□□ -0.19
NME1-201ENST00000013034 SH3BP5LQ7L8J4 393 aa13.87□□□□□ -0.19
NME1-201ENST00000013034 SSH1Q8WYL5 1049 aa13.87□□□□□ -0.19
NME1-201ENST00000013034 COA7Q96BR5 231 aa13.87□□□□□ -0.19
NME1-201ENST00000013034 CRISPLD2Q9H0B8 497 aa13.87□□□□□ -0.19
NME1-201ENST00000013034 SIL1Q9H173 461 aa13.87□□□□□ -0.19
NME1-201ENST00000013034 COL2A1P02458 1487 aaPredicted RBP13.87□□□□□ -0.19
NME1-201ENST00000013034 PTPRFP10586 1907 aa13.86□□□□□ -0.19
NME1-201ENST00000013034 TRIM75PA6NK02 468 aa13.86□□□□□ -0.19
NME1-201ENST00000013034 TFRCP02786 760 aaKnown RBP13.86□□□□□ -0.19
NME1-201ENST00000013034 UBTFL1P0CB47 393 aaPredicted RBP13.86□□□□□ -0.19
NME1-201ENST00000013034 IL15P40933 162 aaPredicted RBP13.86□□□□□ -0.19
NME1-201ENST00000013034 ANKLE1Q8NAG6 615 aa13.86□□□□□ -0.19
NME1-201ENST00000013034 PROCA1Q8NCQ7 364 aaPredicted RBP13.86□□□□□ -0.19
NME1-201ENST00000013034 FAM163AQ96GL9 167 aaPredicted RBP13.86□□□□□ -0.19
NME1-201ENST00000013034 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.86□□□□□ -0.19
NME1-201ENST00000013034 MROH7-TTC4A0A0A0MT08 1334 aa13.86□□□□□ -0.19
NME1-201ENST00000013034 AK9Q5TCS8 1911 aa13.86□□□□□ -0.19
NME1-201ENST00000013034 DDTLA6NHG4 134 aaPredicted RBP13.85□□□□□ -0.19
NME1-201ENST00000013034 E9PSI1 815 aa13.85□□□□□ -0.19
NME1-201ENST00000013034 BTDP43251 543 aa13.85□□□□□ -0.19
NME1-201ENST00000013034 PICALMQ13492 652 aa13.85□□□□□ -0.19
NME1-201ENST00000013034 RASGRF1Q13972 1273 aa13.85□□□□□ -0.19
NME1-201ENST00000013034 ALDH1L2Q3SY69 923 aa13.85□□□□□ -0.19
NME1-201ENST00000013034 CCDC102BQ68D86 513 aa13.85□□□□□ -0.19
NME1-201ENST00000013034 NECAB2Q7Z6G3 386 aa13.85□□□□□ -0.19
NME1-201ENST00000013034 ANKRD13CQ8N6S4 541 aa13.85□□□□□ -0.19
NME1-201ENST00000013034 TBC1D2Q9BYX2 928 aa13.85□□□□□ -0.19
NME1-201ENST00000013034 DDX4Q9NQI0 724 aaKnown RBP13.85□□□□□ -0.19
NME1-201ENST00000013034 TAOK2Q9UL54 1235 aa13.85□□□□□ -0.19
NME1-201ENST00000013034 LOC285556D6RIA3 1793 aa13.85□□□□□ -0.19
NME1-201ENST00000013034 PHIPQ8WWQ0 1821 aa13.85□□□□□ -0.19
NME1-201ENST00000013034 LAMA3Q16787 3333 aa13.85□□□□□ -0.19
NME1-201ENST00000013034 SOX1O00570 391 aaPredicted RBP13.84□□□□□ -0.19
NME1-201ENST00000013034 TBC1D12O60347 775 aa13.84□□□□□ -0.19
NME1-201ENST00000013034 HMGCRP04035 888 aa13.84□□□□□ -0.19
NME1-201ENST00000013034 SPTY2D1Q68D10 685 aaPredicted RBP13.84□□□□□ -0.19
NME1-201ENST00000013034 SLC17A8Q8NDX2 589 aa13.84□□□□□ -0.19
NME1-201ENST00000013034 ABCF2Q9UG63 623 aa13.84□□□□□ -0.19
NME1-201ENST00000013034 HDAC5Q9UQL6 1122 aa13.84□□□□□ -0.19
NME1-201ENST00000013034 NPM3O75607 178 aaKnown RBP13.83□□□□□ -0.2
NME1-201ENST00000013034 GCLCP48506 637 aaPredicted RBP13.83□□□□□ -0.2
NME1-201ENST00000013034 PABPC4Q13310 644 aaKnown RBP eCLIP13.83□□□□□ -0.23e-8■■■■□ 25.2
NME1-201ENST00000013034 TREML2Q5T2D2 321 aa13.83□□□□□ -0.2
NME1-201ENST00000013034 GPR153Q6NV75 609 aa13.83□□□□□ -0.2
NME1-201ENST00000013034 LRCH3Q96II8 777 aa13.83□□□□□ -0.2
NME1-201ENST00000013034 PAWRQ96IZ0 340 aaKnown RBP13.83□□□□□ -0.2
NME1-201ENST00000013034 OSBPL5Q9H0X9 879 aaPredicted RBP13.83□□□□□ -0.2
NME1-201ENST00000013034 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms