RNA–Protein interactions for RNA: ENSMUST00000211945.1

Scn1b-203, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Scn1b, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-203ENSMUST00000211945 Rai14Q9EP71 979 aaKnown RBP22.33■■□□□ 1.17
Scn1b-203ENSMUST00000211945 Acap3Q6NXL5 833 aa22.32■■□□□ 1.16
Scn1b-203ENSMUST00000211945 Tmem130Q6NXM3 419 aa22.32■■□□□ 1.16
Scn1b-203ENSMUST00000211945 Tmem39bQ810L4 492 aa22.32■■□□□ 1.16
Scn1b-203ENSMUST00000211945 GorabQ8BRM2 368 aa22.32■■□□□ 1.16
Scn1b-203ENSMUST00000211945 Hmg20bQ9Z104 317 aa22.32■■□□□ 1.16
Scn1b-203ENSMUST00000211945 Rgs12Q8CGE9 1381 aa22.32■■□□□ 1.16
Scn1b-203ENSMUST00000211945 1700003F12RikA2AKE5 210 aa22.31■■□□□ 1.16
Scn1b-203ENSMUST00000211945 Casp12O08736 419 aa22.31■■□□□ 1.16
Scn1b-203ENSMUST00000211945 Q3TYL0 343 aa22.31■■□□□ 1.16
Scn1b-203ENSMUST00000211945 Tbc1d9bQ5SVR0 1263 aa22.31■■□□□ 1.16
Scn1b-203ENSMUST00000211945 Psen2Q61144 448 aa22.31■■□□□ 1.16
Scn1b-203ENSMUST00000211945 ImmtQ8CAQ8 757 aaKnown RBP22.31■■□□□ 1.16
Scn1b-203ENSMUST00000211945 Bap1Q99PU7 728 aa22.31■■□□□ 1.16
Scn1b-203ENSMUST00000211945 Atrnl1Q6A051 1378 aa22.31■■□□□ 1.16
Scn1b-203ENSMUST00000211945 Col2a1P28481 1487 aa22.31■■□□□ 1.16
Scn1b-203ENSMUST00000211945 Myh14Q6URW6 2000 aa22.31■■□□□ 1.16
Scn1b-203ENSMUST00000211945 Cd3dP04235 173 aa22.31■■□□□ 1.16
Scn1b-203ENSMUST00000211945 Ttc12Q8BW49 704 aa22.31■■□□□ 1.16
Scn1b-203ENSMUST00000211945 Tshz3Q8CGV9 1081 aa22.31■■□□□ 1.16
Scn1b-203ENSMUST00000211945 Atxn7Q8R4I1 867 aa22.31■■□□□ 1.16
Scn1b-203ENSMUST00000211945 Tmc1Q8R4P5 757 aa22.31■■□□□ 1.16
Scn1b-203ENSMUST00000211945 Aldh1b1Q9CZS1 519 aa22.31■■□□□ 1.16
Scn1b-203ENSMUST00000211945 Fbxl16A2RT62 479 aa22.3■■□□□ 1.16
Scn1b-203ENSMUST00000211945 Rnf20Q5DTM8 973 aa22.3■■□□□ 1.16
Scn1b-203ENSMUST00000211945 Akap4Q60662 849 aa22.3■■□□□ 1.16
Scn1b-203ENSMUST00000211945 Ddx20Q9JJY4 825 aaKnown RBP22.3■■□□□ 1.16
Scn1b-203ENSMUST00000211945 Kcnb2A6H8H5 907 aa22.29■■□□□ 1.16
Scn1b-203ENSMUST00000211945 Vmn2r68L7N2B3 851 aa22.29■■□□□ 1.16
Scn1b-203ENSMUST00000211945 Pde11aP0C1Q2 933 aa22.29■■□□□ 1.16
Scn1b-203ENSMUST00000211945 Fgl2P12804 432 aa22.29■■□□□ 1.16
Scn1b-203ENSMUST00000211945 Anapc15P60007 132 aa22.29■■□□□ 1.16
Scn1b-203ENSMUST00000211945 Hand2Q61039 217 aa22.29■■□□□ 1.16
Scn1b-203ENSMUST00000211945 Htatsf1Q8BGC0 757 aa22.29■■□□□ 1.16
Scn1b-203ENSMUST00000211945 Socs7Q8VHQ2 579 aa22.29■■□□□ 1.16
Scn1b-203ENSMUST00000211945 Mei1Q9D4I2 1268 aa22.29■■□□□ 1.16
Scn1b-203ENSMUST00000211945 Styxl1Q9DAR2 321 aa22.29■■□□□ 1.16
Scn1b-203ENSMUST00000211945 Eif5P59325 429 aaKnown RBP22.28■■□□□ 1.16
Scn1b-203ENSMUST00000211945 Abhd15Q5F2F2 459 aa22.28■■□□□ 1.16
Scn1b-203ENSMUST00000211945 VwdeQ6DFV8 926 aa22.28■■□□□ 1.16
Scn1b-203ENSMUST00000211945 B3galt4Q9Z0F0 371 aa22.28■■□□□ 1.16
Scn1b-203ENSMUST00000211945 Plekhg2Q6KAU7 1340 aa22.28■■□□□ 1.16
Scn1b-203ENSMUST00000211945 Ano3A2AHL1 981 aa22.27■■□□□ 1.16
Scn1b-203ENSMUST00000211945 Cyp3a59D3Z2W7 503 aa22.27■■□□□ 1.16
Scn1b-203ENSMUST00000211945 Znf667Q2TL60 609 aa22.27■■□□□ 1.16
Scn1b-203ENSMUST00000211945 Q3UJP5 209 aa22.27■■□□□ 1.16
Scn1b-203ENSMUST00000211945 MyrflQ3UN70 904 aa22.27■■□□□ 1.16
Scn1b-203ENSMUST00000211945 Sgsm2Q80U12 1005 aa22.27■■□□□ 1.16
Scn1b-203ENSMUST00000211945 Atf7Q8R0S1 413 aa22.27■■□□□ 1.16
Scn1b-203ENSMUST00000211945 Clrn2B2RVW2 232 aa22.26■■□□□ 1.15
Scn1b-203ENSMUST00000211945 Tfip11Q9ERA6 838 aaKnown RBP22.26■■□□□ 1.15
Scn1b-203ENSMUST00000211945 Txnrd2Q9JLT4 524 aa22.26■■□□□ 1.15
Scn1b-203ENSMUST00000211945 Il7P10168 154 aa22.26■■□□□ 1.15
Scn1b-203ENSMUST00000211945 Ercc3P49135 783 aa22.26■■□□□ 1.15
Scn1b-203ENSMUST00000211945 VrtnQ3SYK4 740 aa22.26■■□□□ 1.15
Scn1b-203ENSMUST00000211945 ErmnQ5EBJ4 281 aa22.26■■□□□ 1.15
Scn1b-203ENSMUST00000211945 Gm11437Q5QR91 290 aa22.26■■□□□ 1.15
Scn1b-203ENSMUST00000211945 Spty2d1Q68FG3 682 aa22.26■■□□□ 1.15
Scn1b-203ENSMUST00000211945 Epc2Q8C0I4 808 aa22.26■■□□□ 1.15
Scn1b-203ENSMUST00000211945 Cnot6lQ8VEG6 555 aa22.26■■□□□ 1.15
Scn1b-203ENSMUST00000211945 Dynll2Q9D0M5 89 aa22.26■■□□□ 1.15
Scn1b-203ENSMUST00000211945 Tjap1Q9DCD5 539 aa22.26■■□□□ 1.15
Scn1b-203ENSMUST00000211945 Zkscan16A2ALW2 728 aa22.25■■□□□ 1.15
Scn1b-203ENSMUST00000211945 Aak1Q3UHJ0 959 aa22.25■■□□□ 1.15
Scn1b-203ENSMUST00000211945 Ppm1gQ61074 542 aa22.25■■□□□ 1.15
Scn1b-203ENSMUST00000211945 Ccdc148Q6P5U8 527 aa22.25■■□□□ 1.15
Scn1b-203ENSMUST00000211945 Podxl2Q8CAE9 603 aa22.25■■□□□ 1.15
Scn1b-203ENSMUST00000211945 Cdk8Q8R3L8 464 aa22.25■■□□□ 1.15
Scn1b-203ENSMUST00000211945 Pcdhb22Q91XZ8 794 aa22.25■■□□□ 1.15
Scn1b-203ENSMUST00000211945 Telo2Q9DC40 840 aaKnown RBP22.25■■□□□ 1.15
Scn1b-203ENSMUST00000211945 XdhQ00519 1335 aa22.24■■□□□ 1.15
Scn1b-203ENSMUST00000211945 Gm38655A0A286YDK6 273 aa22.24■■□□□ 1.15
Scn1b-203ENSMUST00000211945 Anp32aO35381 247 aa22.24■■□□□ 1.15
Scn1b-203ENSMUST00000211945 Slc9c1Q6UJY2 1175 aa22.24■■□□□ 1.15
Scn1b-203ENSMUST00000211945 KhnynQ80U38 671 aa22.24■■□□□ 1.15
Scn1b-203ENSMUST00000211945 Rnf41Q8BH75 317 aa22.24■■□□□ 1.15
Scn1b-203ENSMUST00000211945 Atad2Q8CDM1 1040 aa22.24■■□□□ 1.15
Scn1b-203ENSMUST00000211945 Ndufv1Q91YT0 464 aa22.24■■□□□ 1.15
Scn1b-203ENSMUST00000211945 Klrc1Q9Z202 244 aa22.24■■□□□ 1.15
Scn1b-203ENSMUST00000211945 Pitpnm2Q6ZPQ6 1335 aa22.24■■□□□ 1.15
Scn1b-203ENSMUST00000211945 PcQ05920 1178 aa22.23■■□□□ 1.15
Scn1b-203ENSMUST00000211945 Scnn1aQ61180 699 aa22.23■■□□□ 1.15
Scn1b-203ENSMUST00000211945 Exoc8Q6PGF7 716 aa22.23■■□□□ 1.15
Scn1b-203ENSMUST00000211945 Otop3Q80UF9 577 aa22.23■■□□□ 1.15
Scn1b-203ENSMUST00000211945 Sp8Q8BMJ8 486 aa22.23■■□□□ 1.15
Scn1b-203ENSMUST00000211945 Rassf8Q8CJ96 419 aa22.23■■□□□ 1.15
Scn1b-203ENSMUST00000211945 Abl1P00520 1123 aa22.22■■□□□ 1.15
Scn1b-203ENSMUST00000211945 Hoxd11P23813 323 aa22.22■■□□□ 1.15
Scn1b-203ENSMUST00000211945 Ccdc174Q3U155 467 aa22.22■■□□□ 1.15
Scn1b-203ENSMUST00000211945 Cep131Q62036 1060 aa22.22■■□□□ 1.15
Scn1b-203ENSMUST00000211945 Mapk4Q6P5G0 583 aa22.22■■□□□ 1.15
Scn1b-203ENSMUST00000211945 Mrps27Q8BK72 415 aaKnown RBP22.22■■□□□ 1.15
Scn1b-203ENSMUST00000211945 Fam205a1D3YZF6 1314 aa22.22■■□□□ 1.15
Scn1b-203ENSMUST00000211945 Tnni2P13412 182 aa22.21■■□□□ 1.15
Scn1b-203ENSMUST00000211945 Bace1P56818 501 aa22.21■■□□□ 1.15
Scn1b-203ENSMUST00000211945 Pald1P70261 859 aa22.21■■□□□ 1.15
Scn1b-203ENSMUST00000211945 Cnnm2Q3TWN3 875 aa22.21■■□□□ 1.15
Scn1b-203ENSMUST00000211945 Snapc2Q91XA5 359 aa22.21■■□□□ 1.15
Scn1b-203ENSMUST00000211945 Krt84Q99M73 603 aa22.21■■□□□ 1.15
Scn1b-203ENSMUST00000211945 Zbtb43Q9DAI4 467 aa22.21■■□□□ 1.15
Retrieved 100 of 22,080 RNA–protein pairs in 11.2 ms