RNA–Protein interactions for RNA: ENSMUST00000136980.7

Prpf40b-208, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Prpf40b, Length 3,047 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-208ENSMUST00000136980 Bcl11bQ99PV8 884 aa13.05□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Polr2dQ9D7M8 142 aaKnown RBP13.05□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Ccne2Q9Z238 404 aa13.05□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Lmtk3Q5XJV6 1424 aa13.05□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Syde2E9PUP1 1314 aa13.05□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Wdr17E9Q271 1322 aa13.05□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Phlpp1Q8CHE4 1687 aa13.05□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Tmem2Q5FWI3 1383 aa13.05□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Metap2O08663 478 aaKnown RBP13.05□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Pex1Q5BL07 1284 aa13.05□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Ift122Q6NWV3 1182 aa13.05□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Ankk1Q8BZ25 745 aa13.05□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Ercc4Q9QZD4 917 aa13.05□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Arap3Q8R5G7 1538 aa13.05□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Rsrc2A2RTL5 376 aaKnown RBP13.05□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Nlrp1aQ2LKU9 1182 aa13.05□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Phkg2Q9DB30 406 aa13.05□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Dctpp1Q9QY93 170 aa13.05□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 A0A1W2P6Q8 802 aa13.04□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Gm9048A0A1W2P7H4 802 aa13.04□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 A0A1W2P7S8 802 aa13.04□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 A0A1W2P7Z8 802 aa13.04□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Gm9046A0A1W2P855 802 aa13.04□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Ddx17Q501J6 650 aaKnown RBP13.04□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Cdc5lQ6A068 802 aaKnown RBP13.04□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Asnsd1Q8BFS9 627 aa13.04□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 GphnQ8BUV3 769 aaKnown RBP13.04□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Phc3Q8CHP6 981 aa13.04□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Baiap2l1Q9DBJ3 514 aa13.04□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Cbx6Q9DBY5 414 aa13.04□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Pdcd6ipQ9WU78 869 aaKnown RBP13.04□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Pde3aQ9Z0X4 1141 aa13.04□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Cyp2d9P11714 504 aa13.04□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Lmod1Q8BVA4 595 aa13.04□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Tc2nQ91XT6 489 aa13.04□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 4930519G04RikQ9CPT7 205 aa13.04□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Q9CYI0 393 aa13.04□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Ppp2r3dQ9Z176 491 aa13.04□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Sos2Q02384 1333 aa13.04□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Rad17Q6NXW6 688 aa13.03□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Luc7l2Q7TNC4 392 aaKnown RBP13.03□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Asic4Q7TNS7 539 aa13.03□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Bank1Q80VH0 783 aa13.03□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Map3k11Q80XI6 850 aa13.03□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Dzip1Q8BMD2 852 aa13.03□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Efcab8Q8C9R9 203 aa13.03□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Washc1Q8VDD8 475 aa13.03□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Sall1Q9ER74 1322 aa13.03□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 IkbkbO88351 757 aa13.03□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Mdh1P14152 334 aa13.03□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Arhgef16Q3U5C8 713 aa13.03□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Mrps31Q61733 384 aaKnown RBP13.03□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Ppp4r3aQ6P2K6 820 aa13.03□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Kcnh5Q920E3 988 aa13.03□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Emilin1Q99K41 1017 aa13.03□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Col15a1O35206 1367 aa13.03□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Robo1O89026 1612 aa13.03□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Sycp2lA0A0M3U1B0 842 aa13.02□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Eya2O08575 532 aa13.02□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Plcb3P51432 1234 aaKnown RBP13.02□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Edrf1Q6GQV7 1239 aa13.02□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Asap2Q7SIG6 958 aa13.02□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Ctdp1Q7TSG2 960 aa13.02□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Hpcal4Q8BGZ1 191 aa13.02□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Ranbp6Q8BIV3 1105 aa13.02□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Nek3Q9R0A5 511 aa13.02□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Stk11Q9WTK7 436 aa13.02□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Vstm4T1NXB5 319 aa13.02□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Cyp2j7A0A140T8U1 504 aa13.02□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 PnnO35691 725 aaKnown RBP13.02□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Sdc2P43407 202 aa13.02□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 LbrQ3U9G9 626 aaKnown RBP13.02□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 TxlnaQ6PAM1 554 aaKnown RBP13.02□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Snd1Q78PY7 910 aaKnown RBP13.02□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Etnk1Q9D4V0 363 aa13.02□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Kcnb1Q03717 857 aa13.02□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Znhit6Q3UFB2 460 aaKnown RBP13.02□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 C87499Q3UX49 493 aa13.02□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Iqcb1Q8BP00 598 aa13.02□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Bicdl2Q8CHW5 507 aa13.02□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Tcp11l2Q8K1H7 517 aa13.02□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Gimap6Q8K349 305 aa13.02□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Efcab2Q9CQ46 164 aa13.02□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Clstn1Q9EPL2 979 aa13.02□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Ltb4r2Q9JJL9 360 aa13.02□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 C3P01027 1663 aa13.01□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Il7P10168 154 aa13.01□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Myd88P22366 296 aa13.01□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Gsdma2Q32M21 443 aa13.01□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Tbx2Q60707 711 aa13.01□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Glis3Q6XP49 780 aa13.01□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Map10Q8BJS7 891 aa13.01□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Taf6lQ8R2K4 616 aa13.01□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Sh2b1Q91ZM2 756 aa13.01□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Rdm1Q9CQK3 281 aa13.01□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 SelenooQ9DBC0 667 aa13.01□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Rims2Q9EQZ7 1530 aa13.01□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 BcorQ8CGN4 1759 aa13.01□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 GnpatP98192 678 aa13.01□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 PsdQ5DTT2 1024 aa13.01□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 15.8 ms