RNA–Protein interactions for RNA: ENSMUST00000115537.1

Col28a1-201, Transcript of Collagen alpha-1(XXVIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col28a1, Length 4,230 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1-201ENSMUST00000115537 Lztfl1Q9JHQ5 299 aa10□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Zranb2Q9R020 330 aaKnown RBP10□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Tbc1d2B1AVH7 922 aa9.99□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Dnajc21E9Q8D0 531 aa9.99□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Eef2kO08796 724 aa9.99□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Top1Q04750 767 aaKnown RBP9.99□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Usp28Q5I043 1051 aa9.99□□□□□ -0.81
Col28a1-201ENSMUST00000115537 CoilQ5SU73 570 aa9.99□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Npdc1Q64322 332 aa9.99□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Ctnna3Q65CL1 895 aa9.99□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Lmod1Q8BVA4 595 aa9.99□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Zbtb3Q91X45 518 aa9.99□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Tktl2Q9D4D4 627 aa9.99□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Hmg20bQ9Z104 317 aa9.99□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Disp3A3KFU9 1347 aa9.99□□□□□ -0.81
Col28a1-201ENSMUST00000115537 TrdnE9Q9K5 693 aa9.99□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Hap1O35668 628 aa9.99□□□□□ -0.81
Col28a1-201ENSMUST00000115537 NapbP28663 298 aa9.99□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Hdgfl1Q2VPR5 283 aa9.99□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Adora1Q60612 326 aa9.99□□□□□ -0.81
Col28a1-201ENSMUST00000115537 AidaQ8C4Q6 305 aa9.99□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Mrpl50Q8VDT9 159 aaKnown RBP9.99□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Adcy3Q8VHH7 1145 aa9.99□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Tpcn1Q9EQJ0 817 aa9.99□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Zfpm1O35615 995 aa9.99□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Chl1P70232 1209 aa9.99□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Gngt1Q61012 74 aa9.99□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Cdc37Q61081 379 aa9.99□□□□□ -0.81
Col28a1-201ENSMUST00000115537 EsrrbQ61539 433 aa9.99□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Ctdp1Q7TSG2 960 aa9.99□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Eif3cQ8R1B4 911 aaKnown RBP9.99□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Ndufab1Q9CR21 156 aa9.99□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Ebag9Q9D0V7 213 aa9.99□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Coro7Q9D2V7 922 aa9.99□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Cdr2P97817 455 aa9.99□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Cyp2c67Q569X9 491 aa9.99□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Dact1Q8R4A3 778 aa9.99□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Cd248Q91V98 765 aa9.99□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Sh2b1Q91ZM2 756 aa9.99□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Klc4Q9DBS5 619 aa9.99□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Atp7bQ64446 1462 aa9.99□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Abcd1P48410 736 aa9.98□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Kifap3P70188 793 aa9.98□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Sptlc2P97363 560 aaKnown RBP9.98□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Rnf40Q3U319 1001 aa9.98□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Ccdc82Q6PG04 518 aa9.98□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Mylk2Q8VCR8 613 aa9.98□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Nwd1A6H603 1563 aa9.98□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Rgs12Q8CGE9 1381 aa9.98□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Kif23E9Q5G3 953 aa9.98□□□□□ -0.81
Col28a1-201ENSMUST00000115537 RargP18911 458 aaKnown RBP9.98□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Clul1Q3ZRW6 464 aa9.98□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Dhx40Q6PE54 779 aaKnown RBP9.98□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Nek9Q8K1R7 984 aa9.98□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Nop2Q922K7 793 aaKnown RBP9.98□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Krt82Q99M74 516 aa9.98□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Akap8Q9DBR0 687 aaKnown RBP9.98□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Tubgcp6G5E8P0 1769 aa9.98□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Rbbp8nlA2ABX0 614 aa9.98□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Proca1B0QZF7 307 aa9.98□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Eya2O08575 532 aa9.98□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Lrrc6O88978 473 aa9.98□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Pafah1b1P63005 410 aaKnown RBP9.98□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Kcna4Q61423 654 aa9.98□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Ankrd24Q80VM7 985 aa9.98□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Tmem67Q8BR76 992 aa9.98□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Naa25Q8BWZ3 972 aa9.98□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Tmem119Q8R138 280 aa9.98□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Cdca7Q9D0M2 382 aa9.98□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Magi2Q9WVQ1 1275 aa9.98□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Gdf11Q9Z1W4 405 aa9.98□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Atp12aQ9Z1W8 1035 aa9.98□□□□□ -0.81
Col28a1-201ENSMUST00000115537 1700029H14RikE9PY36 240 aa9.97□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Stim1P70302 685 aa9.97□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Znf219Q6IQX8 726 aa9.97□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Golph3lQ8R088 285 aaKnown RBP9.97□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Six6os1Q9CTN5 574 aa9.97□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Ino80Q6ZPV2 1559 aa9.97□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Slit3Q9WVB4 1523 aa9.97□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Speer4f2E9Q366 295 aa9.97□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Slc1a4O35874 532 aa9.97□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Mdm2P23804 489 aa9.97□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Tom1l2Q5SRX1 507 aa9.97□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Ezh2Q61188 746 aaKnown RBP9.97□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Cyp2d12Q8BVD2 504 aa9.97□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Tmem266Q8BZB3 538 aa9.97□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Zkscan3Q91VW9 553 aa9.97□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Baiap2l1Q9DBJ3 514 aa9.97□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Rnf123Q5XPI3 1314 aa9.97□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Kdm3aQ6PCM1 1323 aa9.97□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Ces1aE9PYP1 563 aa9.97□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Myo1bP46735 1107 aa9.97□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Pla2g4fQ50L41 855 aa9.97□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Hand2Q61039 217 aa9.97□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Spata16Q8C636 571 aa9.97□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Ints5Q8CHT3 1018 aa9.97□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Sumf1Q8R0F3 372 aa9.97□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Card14Q99KF0 999 aa9.97□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Snapc4Q8BP86 1333 aa9.97□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Ccdc33Q3ULW6 985 aa9.96□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 20.2 ms