RNA–Protein interactions for RNA: ENSMUST00000070797.6

Pcdha1-201, Transcript of Protocadherin alpha 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Pcdha1, Length 5,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-201ENSMUST00000070797 Bfsp1A2AMT1 669 aa16.31■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 Pet2A2AHY8 747 aa16.31■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 Izumo3A6PWV3 263 aa16.31■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 Kifc2O08672 792 aa16.31■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 Kdm5bQ80Y84 1544 aa16.31■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 Cep85lA0A1W2P884 806 aa16.31■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 Bicdl1A0JNT9 577 aa16.31■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 Sept7O55131 436 aa16.31■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 Rps6ka1P18653 724 aa16.31■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 Znf532Q6NXK2 1036 aa16.31■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 DlatQ8BMF4 642 aa16.31■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 Atp10dQ8K2X1 1416 aa16.31■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 Zscan18E9PUD6 809 aa16.31■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 PparaP23204 468 aa16.31■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 Mcm7Q61881 719 aaKnown RBP16.31■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 Klhl20Q8VCK5 604 aa16.31■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 Bicc1Q99MQ1 977 aaKnown RBP16.31■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 Stag1Q9D3E6 1258 aa16.31■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 Ccdc7Q9D541 371 aa16.31■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 1700109H08RikQ9D9C0 210 aa16.31■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 AnkarA2RT91 1465 aa16.3■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 Gm29094F6Q785 221 aa16.3■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 Akr1b8P45377 316 aa16.3■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 SfswapQ3USH5 945 aaKnown RBP16.3■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 Mapkbp1Q6NS57 1503 aa16.3■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 Retreg2Q6NS82 541 aa16.3■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 Ubac1Q8VDI7 409 aa16.3■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 Asic2Q925H0 512 aa16.3■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 MthfsQ9D110 203 aa16.3■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 Abcc6Q9R1S7 1498 aa16.3■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 Frmpd2A0A140LI67 1392 aa16.3■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 Pdrg1P59048 133 aa16.3■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 Usp19Q3UJD6 1360 aa16.3■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 1700017N19RikA0A087WPJ1 469 aa16.3■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 Dennd3A2RT67 1274 aa16.3■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 Eef2P58252 858 aaKnown RBP16.3■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 Klhl7Q8BUL5 586 aa16.3■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 Prc1Q99K43 603 aaKnown RBP16.3■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 Atg3Q9CPX6 314 aa16.3■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 Mrps25Q9D125 171 aaKnown RBP16.3■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 Stk38lQ7TSE6 464 aa16.3■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 4921530L21RikQ9CQ47 274 aa16.3■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 Stat2Q9WVL2 923 aa16.3■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 Dync1i2O88487 612 aaKnown RBP16.29■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 Stx8O88983 236 aa16.29■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 Vps52Q8C754 723 aaKnown RBP16.29■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 AdnpQ9Z103 1108 aaKnown RBP16.29■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 IntuQ059U7 942 aa16.29■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 Ell2Q3UKU1 639 aa16.29■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 D130040H23RikQ8BII3 405 aa16.29■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 Gcc2Q8CHG3 1679 aa16.29■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 Depdc1bQ8BH88 529 aa16.29■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 Me3Q8BMF3 604 aa16.29■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 Rint1Q8BZ36 792 aa16.29■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 Palm3A2TJV2 734 aa16.29■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 Zfp113Q8C689 439 aa16.29■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 PalldQ9ET54 1408 aa16.29■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 Slc1a4O35874 532 aa16.28■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 Cct6bQ61390 531 aa16.28■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 Clasp2Q8BRT1 1286 aaKnown RBP16.28■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 NelfbQ8C4Y3 580 aa16.28■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 Plekho1Q9JIY0 408 aa16.28■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 Slc4a4O88343 1079 aa16.28■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 Dact3Q0PHV7 610 aa16.28■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 TchpQ3TVW5 497 aa16.28■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 NntQ61941 1086 aaKnown RBP16.28■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 Kifap3P70188 793 aa16.28■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 Arhgef2Q60875 985 aa16.28■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 Fancd2Q80V62 1450 aa16.28■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 Adgrl2Q8JZZ7 1487 aa16.28■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 Caprin2Q05A80 1031 aaKnown RBP16.28■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 Sh2b1Q91ZM2 756 aa16.28■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 CactinQ9CS00 772 aaKnown RBP16.28■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 RpainQ9CWY9 219 aa16.28■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 Gm6588E9Q3K0 461 aa16.27■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 Eif4a2P10630 407 aa16.27■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 Kif2cQ922S8 721 aa16.27■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 Fam133bQ9CVI2 245 aaKnown RBP16.27■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 OvosQ3UU35 1456 aa16.27■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 Ccdc175E9PVB3 822 aa16.27■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 Enox2Q8R0Z2 598 aa16.27■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 Ror2Q9Z138 944 aa16.27■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 Nphp4P59240 1425 aa16.27■□□□□ 0.2
Pcdha1-201ENSMUST00000070797 Rpl13P47963 211 aaKnown RBP16.27■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Lmnb2P21619 596 aaKnown RBP16.27■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 SbdsP70122 250 aa16.27■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 NeblQ0II04 452 aa16.27■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Dctpp1Q9QY93 170 aa16.27■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Stk11Q9WTK7 436 aa16.27■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Hfm1D3Z4R1 1434 aa16.27■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Zfp781Q0P5U5 243 aa16.26■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 PrimpolQ6P1E7 537 aa16.26■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Mei4Q8BRM6 389 aa16.26■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Usp37Q8C0R0 979 aa16.26■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Smc6Q924W5 1097 aa16.26■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Stx17Q9D0I4 301 aa16.26■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Enc1O35709 589 aa16.26■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 PpardP35396 440 aa16.26■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Ppp1r21Q3TDD9 780 aa16.26■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 LnpkQ7TQ95 425 aa16.26■□□□□ 0.19
Retrieved 100 of 22,080 RNA–protein pairs in 11.7 ms