RNA–Protein interactions for RNA: ENSMUST00000020911.13

Sdc1-201, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 3,157 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-201ENSMUST00000020911 Rad50P70388 1312 aa13.1□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Nrg3O35181 713 aa13.1□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Vps54Q5SPW0 977 aa13.1□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Tsga10Q6NY15 697 aa13.1□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Plcd1Q8R3B1 756 aa13.1□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Col18a1P39061 1774 aa13.09□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Grik3B1AS29 919 aa13.09□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Ppfia1B2RXQ2 1266 aa13.09□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Sem1P60897 70 aa13.09□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Sycp1Q62209 993 aa13.09□□□□□ -0.31
Sdc1-201ENSMUST00000020911 TrhQ62361 256 aa13.09□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Rps6ka6Q7TPS0 764 aa13.09□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Ppp2r2cQ8BG02 447 aa13.09□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Ms4a2P20490 235 aa13.09□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Gspt2Q149F3 632 aa13.09□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Cdc37Q61081 379 aa13.09□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Ddx58Q6Q899 926 aa13.09□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Ripor2Q80U16 1078 aa13.09□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Tmem87aQ8BXN9 555 aa13.09□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Syf2Q9D198 242 aaKnown RBP13.09□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Stard3nlQ9DCI3 235 aa13.09□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Ifit2Q64112 472 aa13.08□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Ltv1Q6NSQ7 470 aaKnown RBP13.08□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Tti2Q8BGV4 512 aa13.08□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Zfp113Q8C689 439 aa13.08□□□□□ -0.32
Sdc1-201ENSMUST00000020911 CgasQ8C6L5 507 aa13.08□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Dis3l2Q8CI75 870 aaKnown RBP13.08□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Rassf8Q8CJ96 419 aa13.08□□□□□ -0.32
Sdc1-201ENSMUST00000020911 ZgpatQ8VDM1 511 aa13.08□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Trim42Q9D2H5 723 aa13.08□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Spata1Q9D5R4 444 aa13.08□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Tns2Q8CGB6 1400 aa13.08□□□□□ -0.32
Sdc1-201ENSMUST00000020911 AceP09470 1312 aa13.08□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Clec11aO88200 328 aa13.08□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Myd88P22366 296 aa13.08□□□□□ -0.32
Sdc1-201ENSMUST00000020911 G3bp2P97379 482 aaKnown RBP13.08□□□□□ -0.32
Sdc1-201ENSMUST00000020911 LbrQ3U9G9 626 aaKnown RBP13.08□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Gnat3Q3V3I2 354 aa13.08□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Mrpl50Q8VDT9 159 aaKnown RBP13.08□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Cdca7lQ922M5 438 aa13.08□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Paip2Q9D6V8 124 aa13.08□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Uchl5Q9WUP7 329 aa13.08□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Rnf123Q5XPI3 1314 aa13.08□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Timm10P62073 90 aa13.08□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Psmb7P70195 277 aa13.08□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Nlrp9bQ66X22 1003 aa13.08□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Dusp9Q7TNL7 452 aa13.08□□□□□ -0.32
Sdc1-201ENSMUST00000020911 BlmhQ8R016 455 aa13.08□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Ssfa2Q922B9 1252 aa13.08□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Atp1a3Q6PIC6 1013 aa13.07□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Trim6Q8BGE7 488 aa13.07□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Rmi1Q9D4G9 616 aa13.07□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Ccdc24E9PUW8 296 aa13.07□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Ppfia3P60469 1194 aa13.07□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Pkp1P97350 728 aaKnown RBP13.07□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Nlrp4cQ3TKR3 982 aa13.07□□□□□ -0.32
Sdc1-201ENSMUST00000020911 DbnlQ62418 436 aa13.07□□□□□ -0.32
Sdc1-201ENSMUST00000020911 B4galnt4Q766D5 1034 aa13.07□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Cep120Q7TSG1 988 aa13.07□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Iqcb1Q8BP00 598 aa13.07□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Krt222Q8CCX5 294 aa13.07□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Rbm8a2A0A0N4SUH6 174 aa13.06□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Cpsf2O35218 782 aaKnown RBP13.06□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Usp28Q5I043 1051 aa13.06□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Cep131Q62036 1060 aa13.06□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Bsdc1Q80Y55 427 aa13.06□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Lmod1Q8BVA4 595 aa13.06□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Lrrc42Q8R2U7 421 aa13.06□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Sgsm3Q8VCZ6 750 aa13.06□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Rbm5Q91YE7 815 aaKnown RBP13.06□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Rbm8aQ9CWZ3 174 aa13.06□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Gli3Q61602 1583 aa13.06□□□□□ -0.32
Sdc1-201ENSMUST00000020911 InsrrQ9WTL4 1300 aa13.06□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Zfpm1O35615 995 aa13.06□□□□□ -0.32
Sdc1-201ENSMUST00000020911 GmnnO88513 206 aa13.06□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Gimap5Q8BWF2 308 aa13.06□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Ssh3Q8K330 649 aa13.06□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Polr3dQ91WD1 398 aa13.06□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Uts2Q9QZQ3 123 aa13.06□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Pard3Q99NH2 1333 aa13.06□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Mst1rQ62190 1378 aa13.06□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Rbbp8nlA2ABX0 614 aa13.06□□□□□ -0.32
Sdc1-201ENSMUST00000020911 GptQ8QZR5 496 aa13.06□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Q9D9S1 216 aa13.06□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Cwc25Q9DBF7 416 aa13.06□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Akap8Q9DBR0 687 aaKnown RBP13.06□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Lztfl1Q9JHQ5 299 aa13.06□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Ttc13A0A1L1SSC7 844 aa13.05□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Exoc4O35382 975 aa13.05□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Slc30a9Q5IRJ6 567 aa13.05□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Me3Q8BMF3 604 aa13.05□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Mtmr6Q8VE11 617 aa13.05□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Nip7Q9CXK8 180 aaKnown RBP13.05□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Bbof1Q3V079 533 aa13.05□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Ifit1Q64282 463 aa13.05□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Tmem87bQ8BKU8 555 aa13.05□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Actn2Q9JI91 894 aa13.05□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Slit1Q80TR4 1531 aa13.05□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Pdzrn4E9PUZ9 1014 aa13.04□□□□□ -0.32
Sdc1-201ENSMUST00000020911 Slc1a4O35874 532 aa13.04□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 19.6 ms