RNA–Protein interactions for RNA: ENSMUST00000005394.12

Ufd1-201, Transcript of Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ufd1, Length 1,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1-201ENSMUST00000005394 Jakmip3Q5DTN8 844 aa13.77□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Tmem59lQ7TNI2 337 aa13.77□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Vipas39Q8BGQ1 491 aa13.77□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Krt222Q8CCX5 294 aa13.77□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Ccdc38Q8CDN8 563 aa13.77□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Dis3l2Q8CI75 870 aaKnown RBP13.77□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Eif3bQ8JZQ9 803 aaKnown RBP13.77□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Klc3Q91W40 508 aa13.77□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Vmn2r23E9PXI5 849 aa13.76□□□□□ -0.21
Ufd1-201ENSMUST00000005394 NpeppsQ11011 920 aa13.76□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Map3k11Q80XI6 850 aa13.76□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Tpcn2Q8BWC0 731 aa13.76□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Kiaa0319lQ8K135 1048 aa13.76□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Ccdc12Q8R344 166 aaKnown RBP13.76□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Ribc1Q9D0B8 379 aa13.76□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Coro7Q9D2V7 922 aa13.76□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Atp12aQ9Z1W8 1035 aa13.76□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Atp8b5A3FIN4 1183 aa13.76□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Gm5624F6ZZG8 207 aa13.76□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Neurod6P48986 337 aa13.76□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Iqsec3Q3TES0 1195 aa13.76□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Luc7l2Q7TNC4 392 aaKnown RBP13.76□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Vps37dQ810I0 261 aa13.76□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Ehd2Q8BH64 543 aa13.76□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Hgh1Q8C3I8 393 aa13.76□□□□□ -0.21
Ufd1-201ENSMUST00000005394 AidaQ8C4Q6 305 aa13.76□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Phldb2Q8K1N2 1249 aa13.76□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Gdap1l1Q8VE33 370 aa13.76□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Zkscan3Q91VW9 553 aa13.76□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Zcchc17Q9ESX4 241 aaKnown RBP13.76□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Rcan1Q9JHG6 198 aa13.76□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Kif23E9Q5G3 953 aa13.75□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Dapk3O54784 448 aa13.75□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Gnat3Q3V3I2 354 aa13.75□□□□□ -0.21
Ufd1-201ENSMUST00000005394 GpkowQ56A08 488 aa13.75□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Igsf3Q6ZQA6 1194 aa13.75□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Slc5a1Q8C3K6 665 aa13.75□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Ccdc150Q8CDI7 1110 aa13.75□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Ppp4r3bQ922R5 820 aa13.75□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Irx6Q9ER75 438 aa13.75□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Hip1rQ9JKY5 1068 aa13.75□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Cbx8Q9QXV1 362 aa13.75□□□□□ -0.21
Ufd1-201ENSMUST00000005394 CpdO89001 1377 aa13.75□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Pde4bB1AWC9 736 aa13.74□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Epha2Q03145 977 aa13.74□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Krt39Q6IFX4 482 aa13.74□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Hpcal4Q8BGZ1 191 aa13.74□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Tmem266Q8BZB3 538 aa13.74□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Q8C5K5 320 aa13.74□□□□□ -0.21
Ufd1-201ENSMUST00000005394 ImmtQ8CAQ8 757 aaKnown RBP13.74□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Ccdc73Q8CDM4 1066 aa13.74□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Tube1Q9D6T1 475 aa13.74□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Cbx6Q9DBY5 414 aa13.74□□□□□ -0.21
Ufd1-201ENSMUST00000005394 MypnQ5DTJ9 1315 aa13.74□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Pla2g4bP0C871 782 aa13.74□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Adssl1P28650 457 aa13.74□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Rad23aP54726 363 aa13.74□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Gas2l3Q3UWW6 683 aa13.74□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Acbd5Q5XG73 508 aa13.74□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Gpr150Q8BL07 427 aa13.74□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Tcp11l1Q8BTG3 509 aa13.74□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Ankk1Q8BZ25 745 aa13.74□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Rrp1bQ91YK2 724 aaKnown RBP13.74□□□□□ -0.21
Ufd1-201ENSMUST00000005394 MycbpQ9EQS3 103 aa13.74□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Pus3Q9JI38 481 aa13.74□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Kcnh3Q9WVJ0 1095 aa13.74□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Tns2Q8CGB6 1400 aa13.74□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Sik3Q6P4S6 1311 aa13.73□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Prl3d3A0A0M6L0J6 224 aa13.73□□□□□ -0.21
Ufd1-201ENSMUST00000005394 En2P09066 324 aa13.73□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Pbx1P41778 430 aa13.73□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Fam198bQ3UPI1 517 aa13.73□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Nab2Q61127 525 aa13.73□□□□□ -0.21
Ufd1-201ENSMUST00000005394 MmeQ61391 750 aa13.73□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Npdc1Q64322 332 aa13.73□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Lrrc1Q80VQ1 524 aa13.73□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Krt25Q8VCW2 446 aa13.73□□□□□ -0.21
Ufd1-201ENSMUST00000005394 NenfQ9CQ45 171 aa13.73□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Phkg2Q9DB30 406 aa13.73□□□□□ -0.21
Ufd1-201ENSMUST00000005394 PdclQ9DBX2 301 aa13.73□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Vstm4T1NXB5 319 aa13.73□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Cdc27A2A6Q5 825 aa13.72□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Ppfia4B8QI36 1187 aa13.72□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Sult6b1P0CC03 303 aa13.72□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Bcl2l13P59017 434 aa13.72□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Cdkl5Q3UTQ8 938 aa13.72□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Cd37Q61470 281 aa13.72□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Clec16aQ80U30 1036 aa13.72□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Anks1bQ8BIZ1 1259 aa13.72□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Tmem67Q8BR76 992 aa13.72□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Cep55Q8BT07 462 aa13.72□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Golim4Q8BXA1 655 aa13.72□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Cgref1Q8R1U2 281 aa13.72□□□□□ -0.21
Ufd1-201ENSMUST00000005394 ToporslQ9D2F8 683 aa13.72□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Mkrn1Q9QXP6 481 aa13.72□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Shank3Q4ACU6 1730 aa13.72□□□□□ -0.21
Ufd1-201ENSMUST00000005394 SsbP32067 415 aaKnown RBP13.72□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Nek1P51954 1203 aa13.72□□□□□ -0.21
Ufd1-201ENSMUST00000005394 HrQ61645 1182 aa13.72□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Asic4Q7TNS7 539 aa13.72□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 30.7 ms