RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Atp10dQ8K2X1 1416 aa10.18□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Zscan25B2RX31 543 aa10.18□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Tcp1P11983 556 aaKnown RBP10.18□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 NppbP40753 121 aa10.18□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Taf12Q8VE65 161 aa10.18□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Ccdc70Q9D9B0 223 aa10.18□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Skor2A7M7C7 1008 aa10.18□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Ftl1P29391 183 aa10.18□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Ranbp1P34022 203 aaKnown RBP10.18□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Frat1P70339 274 aa10.18□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Mindy4Q3UQI9 744 aa10.18□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Gm5169Q5M8P2 212 aa10.18□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Krit1Q6S5J6 736 aa10.18□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Znf830Q8R1N0 363 aaKnown RBP10.18□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 CacybpQ9CXW3 229 aa10.18□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Rsph3bQ9DA80 389 aa10.18□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Stx12Q9ER00 274 aa10.18□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Arhgap4B1AUY3 965 aa10.18□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Ncf2O70145 525 aa10.18□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 PparaP23204 468 aa10.18□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Psmc2P46471 433 aa10.18□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Lrriq3Q14DL3 633 aa10.18□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Pih1h3bQ8C6P5 218 aa10.18□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Taf7lQ9D3R9 471 aa10.18□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Arhgef12Q8R4H2 1543 aaKnown RBP10.17□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Neo1P97798 1493 aa10.17□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Ankrd50F7BE84 1390 aa10.17□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Atp2b1G5E829 1220 aa10.17□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Zfp781Q0P5U5 243 aa10.17□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Tmem87aQ8BXN9 555 aa10.17□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Fancd2Q80V62 1450 aa10.17□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Plekhg2Q6KAU7 1340 aa10.17□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Zhx1P70121 873 aa10.17□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Pde1bQ01065 535 aa10.17□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Fgd5Q80UZ0 1219 aa10.17□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Ythdc2B2RR83 1445 aaKnown RBP10.17□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 PtprgQ05909 1442 aa10.17□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Znf568E9PYI1 671 aa10.17□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Gm6121L7MUF1 212 aa10.17□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Cpsf2O35218 782 aaKnown RBP10.17□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 TsksO54887 585 aa10.17□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Ccnl1Q52KE7 532 aaKnown RBP10.17□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 MycbpapQ5SUV2 932 aa10.17□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Trim17Q7TPM3 477 aa10.17□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Q8BZJ8 459 aa10.17□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Zswim4Q8C7B8 1101 aa10.17□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Irs4Q9Z0Y7 1216 aa10.17□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Zkscan16A2ALW2 728 aa10.17□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 PhbP67778 272 aaKnown RBP10.17□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Dcaf17Q3TUL7 519 aa10.17□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Pex1Q5BL07 1284 aa10.17□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Ppp1r13bQ62415 1087 aa10.17□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Dzip3Q7TPV2 1204 aa10.17□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 HhatQ8BMT9 499 aa10.17□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Shroom2A2ALU4 1481 aa10.17□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Ccdc175E9PVB3 822 aa10.16□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Oas2E9Q9A9 742 aa10.16□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Zfpm1O35615 995 aa10.16□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Cd72P21855 354 aa10.16□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Tdo2P48776 406 aa10.16□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Mcm10Q0VBD2 885 aa10.16□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Ano6Q6P9J9 911 aa10.16□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Slc7a6osQ7TPE5 306 aa10.16□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 VmacQ8BP01 174 aa10.16□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 ParnQ8VDG3 624 aa10.16□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Sall3Q62255 1320 aa10.16□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Cnbd1B1AWM0 430 aa10.16□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 EmbP21995 330 aa10.16□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Nub1P54729 614 aa10.16□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Cnga4Q3UW12 575 aa10.16□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Luc7l3Q5SUF2 432 aaKnown RBP10.16□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Ppfia2Q8BSS9 1257 aa10.16□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Tceanc2Q8R2M0 207 aa10.16□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Cyp27a1Q9DBG1 533 aa10.16□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 H2-OaQ9QWV1 250 aa10.16□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Cpsf1Q9EPU4 1441 aaKnown RBP10.16□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 TnksQ6PFX9 1320 aa10.16□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 PtprkP35822 1457 aa10.16□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Prr16A3KMN5 304 aa10.16□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Gm4297D3YWB7 211 aa10.16□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Lmnb2P21619 596 aaKnown RBP10.16□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Pfdn6Q03958 127 aa10.16□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Tmed8Q3UHI4 326 aa10.16□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Mettl14Q3UIK4 456 aa10.16□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 ThemisQ8BGW0 636 aa10.16□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Ufl1Q8CCJ3 793 aaKnown RBP10.16□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Uba5Q8VE47 403 aa10.16□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Gm5624F6ZZG8 207 aa10.16□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Acnat2Q8BGG9 420 aa10.16□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Acsbg1Q99PU5 721 aa10.16□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Sar1bQ9CQC9 198 aa10.16□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Eif4a2P10630 407 aa10.15□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Krt14Q61781 484 aa10.15□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Cadps2Q8BYR5 1297 aa10.15□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Spata16Q8C636 571 aa10.15□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Zfp202Q8C879 641 aa10.15□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 RtcbQ99LF4 505 aaKnown RBP10.15□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Naa16Q9DBB4 864 aa10.15□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Foxo3Q9WVH4 672 aa10.15□□□□□ -0.78
Ccdc47-201ENSMUST00000002043 Crocc2F6XLV1 1638 aa10.15□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 18.7 ms