RNA–Protein interactions for RNA: YPL166W

ATG29, Transcript of Autophagy-specific protein, yeastyeast

Gene ATG29, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG29YPL166W EDS1P38073 919 aa10.63□□□□□ -0.71
ATG29YPL166W GRE2Q12068 342 aaKnown RBP10.63□□□□□ -0.71
ATG29YPL166W TFG1P41895 735 aaPredicted RBP10.62□□□□□ -0.71
ATG29YPL166W YEL023CP39992 682 aa10.6□□□□□ -0.71
ATG29YPL166W COQ8P27697 501 aa10.59□□□□□ -0.71
ATG29YPL166W PTC3P34221 468 aaKnown RBP10.59□□□□□ -0.71
ATG29YPL166W PTC4P38089 393 aa10.59□□□□□ -0.71
ATG29YPL166W ATH1P48016 1211 aa10.56□□□□□ -0.72
ATG29YPL166W GUT1P32190 709 aa10.53□□□□□ -0.72
ATG29YPL166W SAP30P38429 201 aa10.51□□□□□ -0.73
ATG29YPL166W YDL129WQ07555 291 aa10.5□□□□□ -0.73
ATG29YPL166W NOP53Q12080 455 aaKnown RBP10.41□□□□□ -0.74
ATG29YPL166W SOL3P38858 249 aa10.4□□□□□ -0.74
ATG29YPL166W NST1P53935 1240 aa10.4□□□□□ -0.74
ATG29YPL166W PML39Q03760 334 aa10.4□□□□□ -0.74
ATG29YPL166W CHL1P22516 861 aaPredicted RBP10.33□□□□□ -0.76
ATG29YPL166W PRE3P38624 215 aa10.32□□□□□ -0.76
ATG29YPL166W MPH3P0CE00 602 aa10.31□□□□□ -0.76
ATG29YPL166W AI4P03878 556 aa10.3□□□□□ -0.76
ATG29YPL166W MID1P41821 548 aa10.29□□□□□ -0.76
ATG29YPL166W YGR273CP53329 174 aa10.28□□□□□ -0.76
ATG29YPL166W SET1P38827 1080 aaKnown RBP10.27□□□□□ -0.77
ATG29YPL166W YDR344CQ05510 147 aa10.27□□□□□ -0.77
ATG29YPL166W ILV3P39522 585 aaKnown RBP10.25□□□□□ -0.77
ATG29YPL166W ELP4Q02884 456 aaKnown RBP10.23□□□□□ -0.77
ATG29YPL166W BCK2P33306 851 aa10.21□□□□□ -0.77
ATG29YPL166W ARH1P48360 493 aa10.19□□□□□ -0.78
ATG29YPL166W PEX29Q03370 554 aa10.19□□□□□ -0.78
ATG29YPL166W VRP1P37370 817 aa10.1□□□□□ -0.79
ATG29YPL166W SLI15P38283 698 aa10.1□□□□□ -0.79
ATG29YPL166W KEX1P09620 729 aa10.09□□□□□ -0.79
ATG29YPL166W MPC54Q08550 464 aa10.09□□□□□ -0.79
ATG29YPL166W HAP5Q02516 242 aa10.08□□□□□ -0.8
ATG29YPL166W SPT23P35210 1082 aa10.07□□□□□ -0.8
ATG29YPL166W UBP14P38237 781 aaKnown RBP10.04□□□□□ -0.8
ATG29YPL166W RQC2Q12532 1038 aaKnown RBP10.04□□□□□ -0.8
ATG29YPL166W VHR2P40041 505 aa10.03□□□□□ -0.8
ATG29YPL166W YLR326WQ06170 240 aaKnown RBP10.03□□□□□ -0.8
ATG29YPL166W NMA111P53920 997 aa10.02□□□□□ -0.81
ATG29YPL166W XDJ1P39102 459 aa10.01□□□□□ -0.81
ATG29YPL166W IFH1P39520 1085 aa10.01□□□□□ -0.81
ATG29YPL166W DPL1Q05567 589 aa10.01□□□□□ -0.81
ATG29YPL166W BNI4P53858 892 aa9.99□□□□□ -0.81
ATG29YPL166W PCS60P38137 543 aaKnown RBP RIP-Chip data9.95□□□□□ -0.82not detected
ATG29YPL166W PTC2P39966 464 aaKnown RBP9.95□□□□□ -0.82
ATG29YPL166W CDC73Q06697 393 aa9.94□□□□□ -0.82
ATG29YPL166W RAD54P32863 898 aa9.93□□□□□ -0.82
ATG29YPL166W YML082WQ04533 649 aaKnown RBP9.93□□□□□ -0.82
ATG29YPL166W YPR148CQ06523 435 aa9.92□□□□□ -0.82
ATG29YPL166W ISU2Q12056 156 aa9.91□□□□□ -0.82
ATG29YPL166W DMA1P38823 416 aa9.88□□□□□ -0.83
ATG29YPL166W YDR090CQ03193 310 aa9.88□□□□□ -0.83
ATG29YPL166W REF2P42073 533 aaPredicted RBP9.86□□□□□ -0.83
ATG29YPL166W VPS70P47161 811 aa9.86□□□□□ -0.83
ATG29YPL166W KIC1P38692 1080 aa9.85□□□□□ -0.83
ATG29YPL166W RPP1BP10622 106 aaKnown RBP9.82□□□□□ -0.84
ATG29YPL166W RAM1P22007 431 aa9.8□□□□□ -0.84
ATG29YPL166W YPR015CQ12531 247 aa9.8□□□□□ -0.84
ATG29YPL166W DPS1P04802 557 aaKnown RBP9.78□□□□□ -0.84
ATG29YPL166W PDR1P12383 1068 aa9.77□□□□□ -0.85
ATG29YPL166W COX6P00427 148 aa9.71□□□□□ -0.86
ATG29YPL166W PEX21P50091 288 aa9.71□□□□□ -0.86
ATG29YPL166W MAK21Q12176 1025 aaKnown RBP9.7□□□□□ -0.86
ATG29YPL166W GAP1P19145 602 aaPredicted RBP9.69□□□□□ -0.86
ATG29YPL166W CSC1Q06538 782 aa9.68□□□□□ -0.86
ATG29YPL166W GYP1Q08484 637 aa9.68□□□□□ -0.86
ATG29YPL166W YRR1Q12172 810 aa9.68□□□□□ -0.86
ATG29YPL166W ORC6P38826 435 aa9.66□□□□□ -0.86
ATG29YPL166W TFB4Q12004 338 aa9.65□□□□□ -0.86
ATG29YPL166W CKB1P43639 278 aa9.64□□□□□ -0.87
ATG29YPL166W TUM1Q08686 304 aaKnown RBP9.63□□□□□ -0.87
ATG29YPL166W PBS2P08018 668 aa9.59□□□□□ -0.87
ATG29YPL166W SAS4Q04003 481 aa9.59□□□□□ -0.87
ATG29YPL166W BUD20Q08004 166 aaPredicted RBP9.59□□□□□ -0.87
ATG29YPL166W RAS1P01119 309 aa9.58□□□□□ -0.88
ATG29YPL166W MVP1P40959 511 aaKnown RBP9.57□□□□□ -0.88
ATG29YPL166W NUD1P32336 851 aa9.56□□□□□ -0.88
ATG29YPL166W STR2P47164 639 aa9.56□□□□□ -0.88
ATG29YPL166W ISM1P48526 1002 aa9.55□□□□□ -0.88
ATG29YPL166W PRT1P06103 763 aaKnown RBP9.54□□□□□ -0.88
ATG29YPL166W SAS10Q12136 610 aaPredicted RBP9.54□□□□□ -0.88
ATG29YPL166W RGR1P19263 1082 aa9.53□□□□□ -0.88
ATG29YPL166W SDH2P21801 266 aa9.52□□□□□ -0.89
ATG29YPL166W SRC1Q03707 834 aa9.52□□□□□ -0.89
ATG29YPL166W AMS1P22855 1083 aa9.51□□□□□ -0.89
ATG29YPL166W NPL4P33755 580 aa9.51□□□□□ -0.89
ATG29YPL166W YPR109WQ06104 294 aa9.51□□□□□ -0.89
ATG29YPL166W MRF1P30775 413 aaPredicted RBP9.47□□□□□ -0.89
ATG29YPL166W GCD11P32481 527 aaKnown RBP9.46□□□□□ -0.9
ATG29YPL166W MAM3Q12296 706 aa9.46□□□□□ -0.9
ATG29YPL166W YEL077CQ3E7X8 1277 aa9.44□□□□□ -0.9
ATG29YPL166W PSE1P32337 1089 aaKnown RBP9.43□□□□□ -0.9
ATG29YPL166W DSF2P38213 736 aa9.43□□□□□ -0.9
ATG29YPL166W TY1A-DR4O74302 440 aa9.42□□□□□ -0.9
ATG29YPL166W TY1A-HP0C2I4 478 aaKnown RBP9.42□□□□□ -0.9
ATG29YPL166W TY1A-AP0CX57 440 aa9.42□□□□□ -0.9
ATG29YPL166W TY1A-PR1P0CX58 440 aa9.42□□□□□ -0.9
ATG29YPL166W TY1A-ORP0CX59 440 aa9.42□□□□□ -0.9
ATG29YPL166W TY1A-PR2P0CX60 440 aa9.42□□□□□ -0.9
ATG29YPL166W TY1A-DR5P0CX65 440 aa9.42□□□□□ -0.9
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms