RNA–Protein interactions for RNA: YPL146C

NOP53, Transcript of Nucleolar protein, yeast

Gene NOP53, Length 1,368 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NOP53	YPL146C	PTC4	P38089	393 aa		5.04	□□□□□ -1.6
NOP53	YPL146C	YLR271W	Q06152	274 aa		5.04	□□□□□ -1.6
NOP53	YPL146C	YFR006W	P43590	535 aa		5.01	□□□□□ -1.61
NOP53	YPL146C	VPS29	P38759	282 aa		5	□□□□□ -1.61
NOP53	YPL146C	ARH1	P48360	493 aa		5	□□□□□ -1.61
NOP53	YPL146C	HTA1	P04911	132 aa	Known RBP	4.99	□□□□□ -1.61
NOP53	YPL146C	HTA2	P04912	132 aa		4.99	□□□□□ -1.61
NOP53	YPL146C	YEL023C	P39992	682 aa		4.98	□□□□□ -1.61
NOP53	YPL146C	GBP2	P25555	427 aa	Known RBP RIP-Chip data	4.97	□□□□□ -1.61	RIP-Chip
NOP53	YPL146C	GAR1	P28007	205 aa	Known RBP	4.97	□□□□□ -1.61
NOP53	YPL146C	STS1	P38637	319 aa		4.97	□□□□□ -1.61
NOP53	YPL146C	SSP1	P38871	571 aa		4.97	□□□□□ -1.61
NOP53	YPL146C	GYP5	Q12344	894 aa		4.97	□□□□□ -1.61
NOP53	YPL146C	SPT23	P35210	1082 aa		4.95	□□□□□ -1.62
NOP53	YPL146C	PML39	Q03760	334 aa		4.95	□□□□□ -1.62
NOP53	YPL146C	DCW1	P36091	449 aa		4.93	□□□□□ -1.62
NOP53	YPL146C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	4.92	□□□□□ -1.62	not detected
NOP53	YPL146C	RTG3	P38165	486 aa		4.91	□□□□□ -1.62
NOP53	YPL146C	MTC5	Q03897	1148 aa		4.87	□□□□□ -1.63
NOP53	YPL146C	MGA2	P40578	1113 aa		4.86	□□□□□ -1.63
NOP53	YPL146C	CST9	Q06032	482 aa		4.84	□□□□□ -1.63
NOP53	YPL146C	PEX29	Q03370	554 aa		4.83	□□□□□ -1.64
NOP53	YPL146C	YML082W	Q04533	649 aa	Known RBP	4.83	□□□□□ -1.64
NOP53	YPL146C	AMS1	P22855	1083 aa		4.81	□□□□□ -1.64
NOP53	YPL146C	MID1	P41821	548 aa		4.76	□□□□□ -1.65
NOP53	YPL146C	PTC2	P39966	464 aa	Known RBP	4.75	□□□□□ -1.65
NOP53	YPL146C	RCR1	P38212	213 aa		4.74	□□□□□ -1.65
NOP53	YPL146C	BNI4	P53858	892 aa		4.74	□□□□□ -1.65
NOP53	YPL146C	HAP5	Q02516	242 aa		4.74	□□□□□ -1.65
NOP53	YPL146C	GRE2	Q12068	342 aa	Known RBP	4.74	□□□□□ -1.65
NOP53	YPL146C	BRE2	P43132	505 aa		4.72	□□□□□ -1.65
NOP53	YPL146C	NST1	P53935	1240 aa		4.67	□□□□□ -1.66
NOP53	YPL146C	GUT1	P32190	709 aa		4.65	□□□□□ -1.66
NOP53	YPL146C	ATH1	P48016	1211 aa		4.65	□□□□□ -1.66
NOP53	YPL146C	GCR2	Q01722	534 aa		4.63	□□□□□ -1.67
NOP53	YPL146C	AI4	P03878	556 aa		4.62	□□□□□ -1.67
NOP53	YPL146C	MPH3	P0CE00	602 aa		4.62	□□□□□ -1.67
NOP53	YPL146C	MAK11	P20484	414 aa	Known RBP	4.61	□□□□□ -1.67
NOP53	YPL146C	RAM2	P29703	316 aa		4.61	□□□□□ -1.67
NOP53	YPL146C	SOL3	P38858	249 aa		4.59	□□□□□ -1.67
NOP53	YPL146C	MPC54	Q08550	464 aa		4.59	□□□□□ -1.67
NOP53	YPL146C	SDH2	P21801	266 aa		4.57	□□□□□ -1.68
NOP53	YPL146C	PTC3	P34221	468 aa	Known RBP	4.57	□□□□□ -1.68
NOP53	YPL146C	NMA111	P53920	997 aa		4.57	□□□□□ -1.68
NOP53	YPL146C	MET22	P32179	357 aa		4.56	□□□□□ -1.68
NOP53	YPL146C	MIF2	P35201	549 aa		4.55	□□□□□ -1.68
NOP53	YPL146C	EDS1	P38073	919 aa		4.55	□□□□□ -1.68
NOP53	YPL146C	ILV3	P39522	585 aa	Known RBP	4.55	□□□□□ -1.68
NOP53	YPL146C	YPR015C	Q12531	247 aa		4.55	□□□□□ -1.68
NOP53	YPL146C	NOP53	Q12080	455 aa	Known RBP	4.54	□□□□□ -1.68
NOP53	YPL146C	COQ8	P27697	501 aa		4.53	□□□□□ -1.69
NOP53	YPL146C	GYP1	Q08484	637 aa		4.53	□□□□□ -1.69
NOP53	YPL146C	YDL176W	Q12027	708 aa		4.53	□□□□□ -1.69
NOP53	YPL146C	ENV9	Q08651	330 aa		4.52	□□□□□ -1.69
NOP53	YPL146C	RAM1	P22007	431 aa		4.51	□□□□□ -1.69
NOP53	YPL146C	DPL1	Q05567	589 aa		4.5	□□□□□ -1.69
NOP53	YPL146C	YEL077C	Q3E7X8	1277 aa		4.49	□□□□□ -1.69
NOP53	YPL146C	SAS4	Q04003	481 aa		4.48	□□□□□ -1.69
NOP53	YPL146C	AIR1	P40507	360 aa	Known RBP	4.46	□□□□□ -1.7
NOP53	YPL146C	SLI15	P38283	698 aa		4.44	□□□□□ -1.7
NOP53	YPL146C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.44	□□□□□ -1.7	not detected
NOP53	YPL146C	YGR273C	P53329	174 aa		4.43	□□□□□ -1.7
NOP53	YPL146C	ISU2	Q12056	156 aa		4.43	□□□□□ -1.7
NOP53	YPL146C	RQC2	Q12532	1038 aa	Known RBP	4.42	□□□□□ -1.7
NOP53	YPL146C	MRF1	P30775	413 aa	Predicted RBP	4.4	□□□□□ -1.7
NOP53	YPL146C	YDR444W	Q04093	687 aa		4.4	□□□□□ -1.7
NOP53	YPL146C	SET1	P38827	1080 aa	Known RBP	4.38	□□□□□ -1.71
NOP53	YPL146C	PDR1	P12383	1068 aa		4.35	□□□□□ -1.71
NOP53	YPL146C	CLA4	P48562	842 aa		4.34	□□□□□ -1.71
NOP53	YPL146C	KEX1	P09620	729 aa		4.32	□□□□□ -1.72
NOP53	YPL146C	UBP14	P38237	781 aa	Known RBP	4.32	□□□□□ -1.72
NOP53	YPL146C	IFH1	P39520	1085 aa		4.31	□□□□□ -1.72
NOP53	YPL146C	DMA1	P38823	416 aa		4.3	□□□□□ -1.72
NOP53	YPL146C	LCB5	Q06147	687 aa	Known RBP	4.3	□□□□□ -1.72
NOP53	YPL146C	YLR326W	Q06170	240 aa	Known RBP	4.3	□□□□□ -1.72
NOP53	YPL146C	CDC73	Q06697	393 aa		4.3	□□□□□ -1.72
NOP53	YPL146C	ERG12	P07277	443 aa		4.29	□□□□□ -1.72
NOP53	YPL146C	YPR148C	Q06523	435 aa		4.29	□□□□□ -1.72
NOP53	YPL146C	LSB3	P43603	459 aa	Known RBP	4.28	□□□□□ -1.72
NOP53	YPL146C	PRT1	P06103	763 aa	Known RBP	4.27	□□□□□ -1.73
NOP53	YPL146C	CDC4	P07834	779 aa		4.27	□□□□□ -1.73
NOP53	YPL146C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	4.27	□□□□□ -1.73	not detected
NOP53	YPL146C	CST6	P40535	587 aa		4.27	□□□□□ -1.73
NOP53	YPL146C	BUD20	Q08004	166 aa	Predicted RBP	4.27	□□□□□ -1.73
NOP53	YPL146C	YDR090C	Q03193	310 aa		4.26	□□□□□ -1.73
NOP53	YPL146C	VHR2	P40041	505 aa		4.25	□□□□□ -1.73
NOP53	YPL146C	TRK2	P28584	889 aa		4.24	□□□□□ -1.73
NOP53	YPL146C	RAD54	P32863	898 aa		4.24	□□□□□ -1.73
NOP53	YPL146C	LAM6	Q08001	693 aa		4.24	□□□□□ -1.73
NOP53	YPL146C	GAP1	P19145	602 aa	Predicted RBP	4.22	□□□□□ -1.73
NOP53	YPL146C	REF2	P42073	533 aa	Predicted RBP	4.21	□□□□□ -1.74
NOP53	YPL146C	RPP1B	P10622	106 aa	Known RBP	4.2	□□□□□ -1.74
NOP53	YPL146C	SAS10	Q12136	610 aa	Predicted RBP	4.19	□□□□□ -1.74
NOP53	YPL146C	MAK21	Q12176	1025 aa	Known RBP	4.19	□□□□□ -1.74
NOP53	YPL146C	COX6	P00427	148 aa		4.18	□□□□□ -1.74
NOP53	YPL146C	CKB1	P43639	278 aa		4.18	□□□□□ -1.74
NOP53	YPL146C	VPS70	P47161	811 aa		4.17	□□□□□ -1.74
NOP53	YPL146C	STR2	P47164	639 aa		4.17	□□□□□ -1.74
NOP53	YPL146C	CSC1	Q06538	782 aa		4.17	□□□□□ -1.74
NOP53	YPL146C	KIC1	P38692	1080 aa		4.16	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 8.7 ms