RNA–Protein interactions for RNA: YMR022W

UBC7, Transcript of Ubiquitin conjugating enzyme, yeastyeast

Gene UBC7, Length 498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC7YMR022W RAM2P29703 316 aa6.35□□□□□ -1.39
UBC7YMR022W DCW1P36091 449 aa6.35□□□□□ -1.39
UBC7YMR022W COQ8P27697 501 aa6.31□□□□□ -1.4
UBC7YMR022W PTC4P38089 393 aa6.31□□□□□ -1.4
UBC7YMR022W YEL023CP39992 682 aa6.31□□□□□ -1.4
UBC7YMR022W GUT1P32190 709 aa6.3□□□□□ -1.4
UBC7YMR022W PTC3P34221 468 aaKnown RBP6.29□□□□□ -1.4
UBC7YMR022W NOP53Q12080 455 aaKnown RBP6.29□□□□□ -1.4
UBC7YMR022W YDL129WQ07555 291 aa6.24□□□□□ -1.41
UBC7YMR022W EDS1P38073 919 aa6.23□□□□□ -1.41
UBC7YMR022W SAP30P38429 201 aa6.23□□□□□ -1.41
UBC7YMR022W DAN4P47179 1161 aa6.23□□□□□ -1.41
UBC7YMR022W SET1P38827 1080 aaKnown RBP6.19□□□□□ -1.42
UBC7YMR022W IFH1P39520 1085 aa6.17□□□□□ -1.42
UBC7YMR022W PEX29Q03370 554 aa6.17□□□□□ -1.42
UBC7YMR022W PML39Q03760 334 aa6.17□□□□□ -1.42
UBC7YMR022W CHL1P22516 861 aaPredicted RBP6.15□□□□□ -1.42
UBC7YMR022W AI4P03878 556 aa6.14□□□□□ -1.43
UBC7YMR022W MPH3P0CE00 602 aa6.12□□□□□ -1.43
UBC7YMR022W PRE3P38624 215 aa6.12□□□□□ -1.43
UBC7YMR022W ELP4Q02884 456 aaKnown RBP6.12□□□□□ -1.43
UBC7YMR022W YGR273CP53329 174 aa6.11□□□□□ -1.43
UBC7YMR022W RPP1BP10622 106 aaKnown RBP6.08□□□□□ -1.44
UBC7YMR022W BCK2P33306 851 aa6.06□□□□□ -1.44
UBC7YMR022W SOL3P38858 249 aa6.06□□□□□ -1.44
UBC7YMR022W MID1P41821 548 aa6.05□□□□□ -1.44
UBC7YMR022W KIC1P38692 1080 aa6.04□□□□□ -1.44
UBC7YMR022W ARH1P48360 493 aa6.04□□□□□ -1.44
UBC7YMR022W NST1P53935 1240 aa6.03□□□□□ -1.44
UBC7YMR022W SPT23P35210 1082 aa6.02□□□□□ -1.45
UBC7YMR022W HAP5Q02516 242 aa6.02□□□□□ -1.45
UBC7YMR022W KEX1P09620 729 aa6□□□□□ -1.45
UBC7YMR022W RAD54P32863 898 aa5.99□□□□□ -1.45
UBC7YMR022W VRP1P37370 817 aa5.99□□□□□ -1.45
UBC7YMR022W VHR2P40041 505 aa5.99□□□□□ -1.45
UBC7YMR022W DPL1Q05567 589 aa5.99□□□□□ -1.45
UBC7YMR022W SLI15P38283 698 aa5.98□□□□□ -1.45
UBC7YMR022W PTC2P39966 464 aaKnown RBP5.98□□□□□ -1.45
UBC7YMR022W RQC2Q12532 1038 aaKnown RBP5.98□□□□□ -1.45
UBC7YMR022W MPC54Q08550 464 aa5.97□□□□□ -1.45
UBC7YMR022W REF2P42073 533 aaPredicted RBP5.96□□□□□ -1.46
UBC7YMR022W VPS70P47161 811 aa5.96□□□□□ -1.46
UBC7YMR022W BNI4P53858 892 aa5.96□□□□□ -1.46
UBC7YMR022W NMA111P53920 997 aa5.96□□□□□ -1.46
UBC7YMR022W ILV3P39522 585 aaKnown RBP5.95□□□□□ -1.46
UBC7YMR022W YPR148CQ06523 435 aa5.95□□□□□ -1.46
UBC7YMR022W PEX21P50091 288 aa5.94□□□□□ -1.46
UBC7YMR022W YLR326WQ06170 240 aaKnown RBP5.94□□□□□ -1.46
UBC7YMR022W UBP14P38237 781 aaKnown RBP5.93□□□□□ -1.46
UBC7YMR022W DMA1P38823 416 aa5.93□□□□□ -1.46
UBC7YMR022W XDJ1P39102 459 aa5.93□□□□□ -1.46
UBC7YMR022W CKB1P43639 278 aa5.93□□□□□ -1.46
UBC7YMR022W ISU2Q12056 156 aa5.93□□□□□ -1.46
UBC7YMR022W MAK21Q12176 1025 aaKnown RBP5.93□□□□□ -1.46
UBC7YMR022W PCS60P38137 543 aaKnown RBP RIP-Chip data5.9□□□□□ -1.46not detected
UBC7YMR022W YML082WQ04533 649 aaKnown RBP5.9□□□□□ -1.46
UBC7YMR022W YDR344CQ05510 147 aa5.88□□□□□ -1.47
UBC7YMR022W CDC73Q06697 393 aa5.87□□□□□ -1.47
UBC7YMR022W COX6P00427 148 aa5.85□□□□□ -1.47
UBC7YMR022W CSC1Q06538 782 aa5.85□□□□□ -1.47
UBC7YMR022W GYP1Q08484 637 aa5.84□□□□□ -1.47
UBC7YMR022W YDR090CQ03193 310 aa5.83□□□□□ -1.48
UBC7YMR022W TFB4Q12004 338 aa5.83□□□□□ -1.48
UBC7YMR022W PBS2P08018 668 aa5.82□□□□□ -1.48
UBC7YMR022W NPL4P33755 580 aa5.82□□□□□ -1.48
UBC7YMR022W DPS1P04802 557 aaKnown RBP5.81□□□□□ -1.48
UBC7YMR022W SPB4P25808 606 aaPredicted RBP5.8□□□□□ -1.48
UBC7YMR022W SAS4Q04003 481 aa5.8□□□□□ -1.48
UBC7YMR022W TUM1Q08686 304 aaKnown RBP5.78□□□□□ -1.48
UBC7YMR022W YRR1Q12172 810 aa5.78□□□□□ -1.48
UBC7YMR022W MAM3Q12296 706 aa5.78□□□□□ -1.48
UBC7YMR022W MRF1P30775 413 aaPredicted RBP5.77□□□□□ -1.49
UBC7YMR022W SAS10Q12136 610 aaPredicted RBP5.76□□□□□ -1.49
UBC7YMR022W PDR1P12383 1068 aa5.74□□□□□ -1.49
UBC7YMR022W ORC6P38826 435 aa5.73□□□□□ -1.49
UBC7YMR022W PRT1P06103 763 aaKnown RBP5.72□□□□□ -1.49
UBC7YMR022W GAP1P19145 602 aaPredicted RBP5.72□□□□□ -1.49
UBC7YMR022W RAM1P22007 431 aa5.72□□□□□ -1.49
UBC7YMR022W PAT1P25644 796 aaKnown RBP5.72□□□□□ -1.49
UBC7YMR022W CLB5P30283 435 aa5.72□□□□□ -1.49
UBC7YMR022W NUD1P32336 851 aa5.72□□□□□ -1.49
UBC7YMR022W MVP1P40959 511 aaKnown RBP5.72□□□□□ -1.49
UBC7YMR022W YEL077CQ3E7X8 1277 aa5.72□□□□□ -1.49
UBC7YMR022W PSE1P32337 1089 aaKnown RBP5.71□□□□□ -1.5
UBC7YMR022W DSF2P38213 736 aa5.7□□□□□ -1.5
UBC7YMR022W YPR109WQ06104 294 aa5.7□□□□□ -1.5
UBC7YMR022W YPR015CQ12531 247 aa5.7□□□□□ -1.5
UBC7YMR022W ERG12P07277 443 aa5.69□□□□□ -1.5
UBC7YMR022W GCD11P32481 527 aaKnown RBP5.69□□□□□ -1.5
UBC7YMR022W SPT16P32558 1035 aaKnown RBP5.69□□□□□ -1.5
UBC7YMR022W RGR1P19263 1082 aa5.68□□□□□ -1.5
UBC7YMR022W IES2P40154 320 aa5.68□□□□□ -1.5
UBC7YMR022W AMS1P22855 1083 aa5.66□□□□□ -1.5
UBC7YMR022W BUD20Q08004 166 aaPredicted RBP5.65□□□□□ -1.5
UBC7YMR022W STR2P47164 639 aa5.64□□□□□ -1.51
UBC7YMR022W TEA1P47988 759 aa5.64□□□□□ -1.51
UBC7YMR022W ISM1P48526 1002 aa5.64□□□□□ -1.51
UBC7YMR022W ATF2P53296 535 aa5.6□□□□□ -1.51
UBC7YMR022W RAS1P01119 309 aa5.59□□□□□ -1.51
UBC7YMR022W RRN7P40992 514 aa5.59□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms