RNA–Protein interactions for RNA: YLR223C

IFH1, Transcript of Coactivator, regulates transcription of ribosomal protein (RP) genes, yeastyeast

Gene IFH1, Length 3,258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
IFH1YLR223C PTC3P34221 468 aaKnown RBP3.66□□□□□ -1.82
IFH1YLR223C IOC2Q12072 812 aa3.66□□□□□ -1.82
IFH1YLR223C SAP30P38429 201 aa3.66□□□□□ -1.82
IFH1YLR223C YEL023CP39992 682 aa3.65□□□□□ -1.82
IFH1YLR223C JIP4Q03361 876 aa3.65□□□□□ -1.82
IFH1YLR223C AIR2Q12476 344 aaKnown RBP3.65□□□□□ -1.83
IFH1YLR223C GUT1P32190 709 aa3.64□□□□□ -1.83
IFH1YLR223C SEC61P32915 480 aa3.64□□□□□ -1.83
IFH1YLR223C EDS1P38073 919 aa3.64□□□□□ -1.83
IFH1YLR223C ELP4Q02884 456 aaKnown RBP3.62□□□□□ -1.83
IFH1YLR223C PTC4P38089 393 aa3.62□□□□□ -1.83
IFH1YLR223C SET1P38827 1080 aaKnown RBP3.62□□□□□ -1.83
IFH1YLR223C YDL129WQ07555 291 aa3.61□□□□□ -1.83
IFH1YLR223C PML39Q03760 334 aa3.61□□□□□ -1.83
IFH1YLR223C KIC1P38692 1080 aa3.58□□□□□ -1.84
IFH1YLR223C RQC2Q12532 1038 aaKnown RBP3.56□□□□□ -1.84
IFH1YLR223C DMA1P38823 416 aa3.55□□□□□ -1.84
IFH1YLR223C IFH1P39520 1085 aa3.55□□□□□ -1.84
IFH1YLR223C VHR2P40041 505 aa3.55□□□□□ -1.84
IFH1YLR223C VPS70P47161 811 aa3.55□□□□□ -1.84
IFH1YLR223C RPP1BP10622 106 aaKnown RBP3.54□□□□□ -1.84
IFH1YLR223C MID1P41821 548 aa3.54□□□□□ -1.84
IFH1YLR223C NOP53Q12080 455 aaKnown RBP3.54□□□□□ -1.84
IFH1YLR223C DAN4P47179 1161 aa3.54□□□□□ -1.84
IFH1YLR223C YGR273CP53329 174 aa3.53□□□□□ -1.84
IFH1YLR223C RAD54P32863 898 aa3.52□□□□□ -1.85
IFH1YLR223C CHL1P22516 861 aaPredicted RBP3.52□□□□□ -1.85
IFH1YLR223C MPH3P0CE00 602 aa3.52□□□□□ -1.85
IFH1YLR223C PEX21P50091 288 aa3.52□□□□□ -1.85
IFH1YLR223C PRE3P38624 215 aa3.51□□□□□ -1.85
IFH1YLR223C AI4P03878 556 aa3.5□□□□□ -1.85
IFH1YLR223C BCK2P33306 851 aa3.49□□□□□ -1.85
IFH1YLR223C SOL3P38858 249 aa3.49□□□□□ -1.85
IFH1YLR223C KEX1P09620 729 aa3.48□□□□□ -1.85
IFH1YLR223C VRP1P37370 817 aa3.48□□□□□ -1.85
IFH1YLR223C REF2P42073 533 aaPredicted RBP3.48□□□□□ -1.85
IFH1YLR223C SPT23P35210 1082 aa3.48□□□□□ -1.85
IFH1YLR223C PTC2P39966 464 aaKnown RBP3.48□□□□□ -1.85
IFH1YLR223C HAP5Q02516 242 aa3.48□□□□□ -1.85
IFH1YLR223C ILV3P39522 585 aaKnown RBP3.47□□□□□ -1.85
IFH1YLR223C SPB4P25808 606 aaPredicted RBP3.47□□□□□ -1.85
IFH1YLR223C NMA111P53920 997 aa3.46□□□□□ -1.85
IFH1YLR223C DPL1Q05567 589 aa3.46□□□□□ -1.85
IFH1YLR223C SLI15P38283 698 aa3.46□□□□□ -1.86
IFH1YLR223C MPC54Q08550 464 aa3.46□□□□□ -1.86
IFH1YLR223C ARH1P48360 493 aa3.46□□□□□ -1.86
IFH1YLR223C CDC73Q06697 393 aa3.45□□□□□ -1.86
IFH1YLR223C YLR326WQ06170 240 aaKnown RBP3.44□□□□□ -1.86
IFH1YLR223C ISU2Q12056 156 aa3.43□□□□□ -1.86
IFH1YLR223C NPL4P33755 580 aa3.43□□□□□ -1.86
IFH1YLR223C GYP1Q08484 637 aa3.43□□□□□ -1.86
IFH1YLR223C CKB1P43639 278 aa3.43□□□□□ -1.86
IFH1YLR223C YDR344CQ05510 147 aa3.43□□□□□ -1.86
IFH1YLR223C UBP14P38237 781 aaKnown RBP3.42□□□□□ -1.86
IFH1YLR223C PCS60P38137 543 aaKnown RBP RIP-Chip data3.41□□□□□ -1.86 RIP-Chip
IFH1YLR223C YRR1Q12172 810 aa3.41□□□□□ -1.86
IFH1YLR223C NST1P53935 1240 aa3.41□□□□□ -1.86
IFH1YLR223C PBS2P08018 668 aa3.4□□□□□ -1.86
IFH1YLR223C BNI4P53858 892 aa3.4□□□□□ -1.86
IFH1YLR223C TUM1Q08686 304 aaKnown RBP3.39□□□□□ -1.87
IFH1YLR223C MAK21Q12176 1025 aaKnown RBP3.39□□□□□ -1.87
IFH1YLR223C MAM3Q12296 706 aa3.38□□□□□ -1.87
IFH1YLR223C XDJ1P39102 459 aa3.38□□□□□ -1.87
IFH1YLR223C YPR148CQ06523 435 aa3.38□□□□□ -1.87
IFH1YLR223C CSC1Q06538 782 aa3.38□□□□□ -1.87
IFH1YLR223C PDR1P12383 1068 aa3.37□□□□□ -1.87
IFH1YLR223C GCD11P32481 527 aaKnown RBP3.37□□□□□ -1.87
IFH1YLR223C DPS1P04802 557 aaKnown RBP3.36□□□□□ -1.87
IFH1YLR223C COX6P00427 148 aa3.36□□□□□ -1.87
IFH1YLR223C IES2P40154 320 aa3.36□□□□□ -1.87
IFH1YLR223C YPR109WQ06104 294 aa3.36□□□□□ -1.87
IFH1YLR223C TFB4Q12004 338 aa3.36□□□□□ -1.87
IFH1YLR223C YDR090CQ03193 310 aa3.35□□□□□ -1.87
IFH1YLR223C YML082WQ04533 649 aaKnown RBP3.34□□□□□ -1.87
IFH1YLR223C PAT1P25644 796 aaKnown RBP3.34□□□□□ -1.88
IFH1YLR223C NUD1P32336 851 aa3.34□□□□□ -1.88
IFH1YLR223C YMR196WQ04336 1088 aa3.33□□□□□ -1.88
IFH1YLR223C YEL077CQ3E7X8 1277 aa3.33□□□□□ -1.88
IFH1YLR223C ERG12P07277 443 aa3.32□□□□□ -1.88
IFH1YLR223C SPT16P32558 1035 aaKnown RBP3.32□□□□□ -1.88
IFH1YLR223C ATF2P53296 535 aa3.32□□□□□ -1.88
IFH1YLR223C MRF1P30775 413 aaPredicted RBP3.31□□□□□ -1.88
IFH1YLR223C PRT1P06103 763 aaKnown RBP3.31□□□□□ -1.88
IFH1YLR223C SAS4Q04003 481 aa3.3□□□□□ -1.88
IFH1YLR223C ORC6P38826 435 aa3.3□□□□□ -1.88
IFH1YLR223C ISM1P48526 1002 aa3.29□□□□□ -1.88
IFH1YLR223C MVP1P40959 511 aaKnown RBP3.29□□□□□ -1.88
IFH1YLR223C CLB5P30283 435 aa3.29□□□□□ -1.88
IFH1YLR223C TEA1P47988 759 aa3.29□□□□□ -1.88
IFH1YLR223C YPR015CQ12531 247 aa3.29□□□□□ -1.88
IFH1YLR223C RGR1P19263 1082 aa3.28□□□□□ -1.88
IFH1YLR223C RRN7P40992 514 aa3.28□□□□□ -1.88
IFH1YLR223C FRK1Q03002 865 aaPredicted RBP3.28□□□□□ -1.88
IFH1YLR223C KEX2P13134 814 aa3.27□□□□□ -1.89
IFH1YLR223C PSE1P32337 1089 aaKnown RBP3.27□□□□□ -1.89
IFH1YLR223C BUD20Q08004 166 aaPredicted RBP3.27□□□□□ -1.89
IFH1YLR223C SAS10Q12136 610 aaPredicted RBP3.27□□□□□ -1.89
IFH1YLR223C DSF2P38213 736 aa3.26□□□□□ -1.89
IFH1YLR223C STR2P47164 639 aa3.26□□□□□ -1.89
IFH1YLR223C TBF1Q02457 562 aa3.26□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms