RNA–Protein interactions for RNA: YJR057W

CDC8, Transcript of Thymidylate and uridylate kinase, yeastyeast

Gene CDC8, Length 651 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC8YJR057W PTC4P38089 393 aa9.83□□□□□ -0.84
CDC8YJR057W GRE2Q12068 342 aaKnown RBP9.83□□□□□ -0.84
CDC8YJR057W DAN4P47179 1161 aa9.82□□□□□ -0.84
CDC8YJR057W YEL023CP39992 682 aa9.8□□□□□ -0.84
CDC8YJR057W ATH1P48016 1211 aa9.77□□□□□ -0.85
CDC8YJR057W GUT1P32190 709 aa9.76□□□□□ -0.85
CDC8YJR057W PTC3P34221 468 aaKnown RBP9.75□□□□□ -0.85
CDC8YJR057W YDL129WQ07555 291 aa9.75□□□□□ -0.85
CDC8YJR057W COQ8P27697 501 aa9.74□□□□□ -0.85
CDC8YJR057W NOP53Q12080 455 aaKnown RBP9.72□□□□□ -0.85
CDC8YJR057W EDS1P38073 919 aa9.71□□□□□ -0.86
CDC8YJR057W SAP30P38429 201 aa9.71□□□□□ -0.86
CDC8YJR057W CHL1P22516 861 aaPredicted RBP9.63□□□□□ -0.87
CDC8YJR057W PRE3P38624 215 aa9.59□□□□□ -0.87
CDC8YJR057W PML39Q03760 334 aa9.59□□□□□ -0.87
CDC8YJR057W AI4P03878 556 aa9.55□□□□□ -0.88
CDC8YJR057W NST1P53935 1240 aa9.54□□□□□ -0.88
CDC8YJR057W MPH3P0CE00 602 aa9.53□□□□□ -0.88
CDC8YJR057W BCK2P33306 851 aa9.51□□□□□ -0.89
CDC8YJR057W SOL3P38858 249 aa9.51□□□□□ -0.89
CDC8YJR057W YGR273CP53329 174 aa9.47□□□□□ -0.89
CDC8YJR057W ELP4Q02884 456 aaKnown RBP9.47□□□□□ -0.89
CDC8YJR057W ARH1P48360 493 aa9.45□□□□□ -0.9
CDC8YJR057W SET1P38827 1080 aaKnown RBP9.44□□□□□ -0.9
CDC8YJR057W PEX29Q03370 554 aa9.44□□□□□ -0.9
CDC8YJR057W MID1P41821 548 aa9.43□□□□□ -0.9
CDC8YJR057W SPT23P35210 1082 aa9.36□□□□□ -0.91
CDC8YJR057W VRP1P37370 817 aa9.35□□□□□ -0.91
CDC8YJR057W ILV3P39522 585 aaKnown RBP9.35□□□□□ -0.91
CDC8YJR057W HAP5Q02516 242 aa9.35□□□□□ -0.91
CDC8YJR057W XDJ1P39102 459 aa9.34□□□□□ -0.91
CDC8YJR057W IFH1P39520 1085 aa9.34□□□□□ -0.91
CDC8YJR057W YDR344CQ05510 147 aa9.33□□□□□ -0.92
CDC8YJR057W SLI15P38283 698 aa9.3□□□□□ -0.92
CDC8YJR057W MPC54Q08550 464 aa9.3□□□□□ -0.92
CDC8YJR057W BNI4P53858 892 aa9.29□□□□□ -0.92
CDC8YJR057W KEX1P09620 729 aa9.28□□□□□ -0.92
CDC8YJR057W DPL1Q05567 589 aa9.27□□□□□ -0.93
CDC8YJR057W PTC2P39966 464 aaKnown RBP9.25□□□□□ -0.93
CDC8YJR057W NMA111P53920 997 aa9.25□□□□□ -0.93
CDC8YJR057W YML082WQ04533 649 aaKnown RBP9.24□□□□□ -0.93
CDC8YJR057W UBP14P38237 781 aaKnown RBP9.22□□□□□ -0.93
CDC8YJR057W RPP1BP10622 106 aaKnown RBP9.21□□□□□ -0.94
CDC8YJR057W YLR326WQ06170 240 aaKnown RBP9.21□□□□□ -0.94
CDC8YJR057W VHR2P40041 505 aa9.19□□□□□ -0.94
CDC8YJR057W ISU2Q12056 156 aa9.19□□□□□ -0.94
CDC8YJR057W RAD54P32863 898 aa9.18□□□□□ -0.94
CDC8YJR057W YPR148CQ06523 435 aa9.15□□□□□ -0.94
CDC8YJR057W PCS60P38137 543 aaKnown RBP RIP-Chip data9.14□□□□□ -0.95not detected
CDC8YJR057W KIC1P38692 1080 aa9.13□□□□□ -0.95
CDC8YJR057W REF2P42073 533 aaPredicted RBP9.11□□□□□ -0.95
CDC8YJR057W CDC73Q06697 393 aa9.11□□□□□ -0.95
CDC8YJR057W DPS1P04802 557 aaKnown RBP9.1□□□□□ -0.95
CDC8YJR057W YDR090CQ03193 310 aa9.06□□□□□ -0.96
CDC8YJR057W MAK21Q12176 1025 aaKnown RBP9.04□□□□□ -0.96
CDC8YJR057W VPS70P47161 811 aa9.03□□□□□ -0.96
CDC8YJR057W DMA1P38823 416 aa9.02□□□□□ -0.97
CDC8YJR057W RAM1P22007 431 aa9.01□□□□□ -0.97
CDC8YJR057W PEX21P50091 288 aa9.01□□□□□ -0.97
CDC8YJR057W CSC1Q06538 782 aa8.99□□□□□ -0.97
CDC8YJR057W COX6P00427 148 aa8.98□□□□□ -0.97
CDC8YJR057W SAS4Q04003 481 aa8.98□□□□□ -0.97
CDC8YJR057W GYP1Q08484 637 aa8.98□□□□□ -0.97
CDC8YJR057W TFB4Q12004 338 aa8.97□□□□□ -0.97
CDC8YJR057W YPR015CQ12531 247 aa8.97□□□□□ -0.97
CDC8YJR057W CKB1P43639 278 aa8.95□□□□□ -0.98
CDC8YJR057W PDR1P12383 1068 aa8.94□□□□□ -0.98
CDC8YJR057W GAP1P19145 602 aaPredicted RBP8.93□□□□□ -0.98
CDC8YJR057W YRR1Q12172 810 aa8.91□□□□□ -0.98
CDC8YJR057W MRF1P30775 413 aaPredicted RBP8.88□□□□□ -0.99
CDC8YJR057W ORC6P38826 435 aa8.88□□□□□ -0.99
CDC8YJR057W TUM1Q08686 304 aaKnown RBP8.88□□□□□ -0.99
CDC8YJR057W SAS10Q12136 610 aaPredicted RBP8.88□□□□□ -0.99
CDC8YJR057W NPL4P33755 580 aa8.85□□□□□ -0.99
CDC8YJR057W PRT1P06103 763 aaKnown RBP8.83□□□□□ -1
CDC8YJR057W AMS1P22855 1083 aa8.83□□□□□ -1
CDC8YJR057W PBS2P08018 668 aa8.82□□□□□ -1
CDC8YJR057W NUD1P32336 851 aa8.82□□□□□ -1
CDC8YJR057W MVP1P40959 511 aaKnown RBP8.82□□□□□ -1
CDC8YJR057W BUD20Q08004 166 aaPredicted RBP8.82□□□□□ -1
CDC8YJR057W YEL077CQ3E7X8 1277 aa8.82□□□□□ -1
CDC8YJR057W RAS1P01119 309 aa8.8□□□□□ -1
CDC8YJR057W RGR1P19263 1082 aa8.78□□□□□ -1
CDC8YJR057W STR2P47164 639 aa8.78□□□□□ -1
CDC8YJR057W ISM1P48526 1002 aa8.77□□□□□ -1.01
CDC8YJR057W SRC1Q03707 834 aa8.77□□□□□ -1.01
CDC8YJR057W YPR109WQ06104 294 aa8.75□□□□□ -1.01
CDC8YJR057W ERG12P07277 443 aa8.73□□□□□ -1.01
CDC8YJR057W PSE1P32337 1089 aaKnown RBP8.73□□□□□ -1.01
CDC8YJR057W GCD11P32481 527 aaKnown RBP8.73□□□□□ -1.01
CDC8YJR057W MAM3Q12296 706 aa8.73□□□□□ -1.01
CDC8YJR057W SDH2P21801 266 aa8.72□□□□□ -1.01
CDC8YJR057W PAT1P25644 796 aaKnown RBP8.7□□□□□ -1.02
CDC8YJR057W CLB5P30283 435 aa8.7□□□□□ -1.02
CDC8YJR057W SPT16P32558 1035 aaKnown RBP8.7□□□□□ -1.02
CDC8YJR057W DSF2P38213 736 aa8.7□□□□□ -1.02
CDC8YJR057W TRK1P12685 1235 aa8.69□□□□□ -1.02
CDC8YJR057W SEC2P17065 759 aa8.65□□□□□ -1.02
CDC8YJR057W SPB4P25808 606 aaPredicted RBP8.64□□□□□ -1.03
CDC8YJR057W TY1A-DR4O74302 440 aa8.63□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 47.4 ms