RNA–Protein interactions for RNA: YGR039W

YGR039W, Transcript of Dubious open reading frame, yeast

Gene YGR039W, Length 312 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YGR039W	YGR039W	GRE2	Q12068	342 aa	Known RBP	7.52	□□□□□ -1.21
YGR039W	YGR039W	EDS1	P38073	919 aa		7.51	□□□□□ -1.21
YGR039W	YGR039W	COQ8	P27697	501 aa		7.49	□□□□□ -1.21
YGR039W	YGR039W	PTC3	P34221	468 aa	Known RBP	7.49	□□□□□ -1.21
YGR039W	YGR039W	YEL023C	P39992	682 aa		7.48	□□□□□ -1.21
YGR039W	YGR039W	TFG1	P41895	735 aa	Predicted RBP	7.47	□□□□□ -1.21
YGR039W	YGR039W	GUT1	P32190	709 aa		7.46	□□□□□ -1.22
YGR039W	YGR039W	PTC4	P38089	393 aa		7.46	□□□□□ -1.22
YGR039W	YGR039W	ATH1	P48016	1211 aa		7.46	□□□□□ -1.22
YGR039W	YGR039W	YDL129W	Q07555	291 aa		7.43	□□□□□ -1.22
YGR039W	YGR039W	NOP53	Q12080	455 aa	Known RBP	7.43	□□□□□ -1.22
YGR039W	YGR039W	SAP30	P38429	201 aa		7.39	□□□□□ -1.23
YGR039W	YGR039W	NST1	P53935	1240 aa		7.39	□□□□□ -1.23
YGR039W	YGR039W	SOL3	P38858	249 aa		7.35	□□□□□ -1.23
YGR039W	YGR039W	AI4	P03878	556 aa		7.32	□□□□□ -1.24
YGR039W	YGR039W	MPH3	P0CE00	602 aa		7.31	□□□□□ -1.24
YGR039W	YGR039W	PML39	Q03760	334 aa		7.31	□□□□□ -1.24
YGR039W	YGR039W	CHL1	P22516	861 aa	Predicted RBP	7.3	□□□□□ -1.24
YGR039W	YGR039W	PRE3	P38624	215 aa		7.3	□□□□□ -1.24
YGR039W	YGR039W	YGR273C	P53329	174 aa		7.28	□□□□□ -1.24
YGR039W	YGR039W	SET1	P38827	1080 aa	Known RBP	7.27	□□□□□ -1.25
YGR039W	YGR039W	ILV3	P39522	585 aa	Known RBP	7.26	□□□□□ -1.25
YGR039W	YGR039W	YDR344C	Q05510	147 aa		7.23	□□□□□ -1.25
YGR039W	YGR039W	BCK2	P33306	851 aa		7.22	□□□□□ -1.25
YGR039W	YGR039W	MID1	P41821	548 aa		7.22	□□□□□ -1.25
YGR039W	YGR039W	ARH1	P48360	493 aa		7.21	□□□□□ -1.26
YGR039W	YGR039W	ELP4	Q02884	456 aa	Known RBP	7.2	□□□□□ -1.26
YGR039W	YGR039W	PEX29	Q03370	554 aa		7.18	□□□□□ -1.26
YGR039W	YGR039W	IFH1	P39520	1085 aa		7.15	□□□□□ -1.26
YGR039W	YGR039W	KEX1	P09620	729 aa		7.14	□□□□□ -1.27
YGR039W	YGR039W	SLI15	P38283	698 aa		7.14	□□□□□ -1.27
YGR039W	YGR039W	MPC54	Q08550	464 aa		7.14	□□□□□ -1.27
YGR039W	YGR039W	HAP5	Q02516	242 aa		7.13	□□□□□ -1.27
YGR039W	YGR039W	SPT23	P35210	1082 aa		7.12	□□□□□ -1.27
YGR039W	YGR039W	YLR326W	Q06170	240 aa	Known RBP	7.11	□□□□□ -1.27
YGR039W	YGR039W	VRP1	P37370	817 aa		7.1	□□□□□ -1.27
YGR039W	YGR039W	BNI4	P53858	892 aa		7.1	□□□□□ -1.27
YGR039W	YGR039W	YPR148C	Q06523	435 aa		7.1	□□□□□ -1.27
YGR039W	YGR039W	UBP14	P38237	781 aa	Known RBP	7.09	□□□□□ -1.27
YGR039W	YGR039W	VHR2	P40041	505 aa		7.08	□□□□□ -1.28
YGR039W	YGR039W	DPL1	Q05567	589 aa		7.08	□□□□□ -1.28
YGR039W	YGR039W	XDJ1	P39102	459 aa		7.07	□□□□□ -1.28
YGR039W	YGR039W	NMA111	P53920	997 aa		7.06	□□□□□ -1.28
YGR039W	YGR039W	RAD54	P32863	898 aa		7.04	□□□□□ -1.28
YGR039W	YGR039W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	7.03	□□□□□ -1.28	not detected
YGR039W	YGR039W	PTC2	P39966	464 aa	Known RBP	7.03	□□□□□ -1.28
YGR039W	YGR039W	YML082W	Q04533	649 aa	Known RBP	7.03	□□□□□ -1.28
YGR039W	YGR039W	YDR090C	Q03193	310 aa		7.01	□□□□□ -1.29
YGR039W	YGR039W	CDC73	Q06697	393 aa		7.01	□□□□□ -1.29
YGR039W	YGR039W	ISU2	Q12056	156 aa		7.01	□□□□□ -1.29
YGR039W	YGR039W	REF2	P42073	533 aa	Predicted RBP	7	□□□□□ -1.29
YGR039W	YGR039W	RPP1B	P10622	106 aa	Known RBP	6.97	□□□□□ -1.29
YGR039W	YGR039W	VPS70	P47161	811 aa		6.96	□□□□□ -1.3
YGR039W	YGR039W	RAM1	P22007	431 aa		6.95	□□□□□ -1.3
YGR039W	YGR039W	KIC1	P38692	1080 aa		6.95	□□□□□ -1.3
YGR039W	YGR039W	MAK21	Q12176	1025 aa	Known RBP	6.93	□□□□□ -1.3
YGR039W	YGR039W	YPR015C	Q12531	247 aa		6.93	□□□□□ -1.3
YGR039W	YGR039W	DPS1	P04802	557 aa	Known RBP	6.91	□□□□□ -1.3
YGR039W	YGR039W	GAP1	P19145	602 aa	Predicted RBP	6.91	□□□□□ -1.3
YGR039W	YGR039W	COX6	P00427	148 aa		6.88	□□□□□ -1.31
YGR039W	YGR039W	PDR1	P12383	1068 aa		6.88	□□□□□ -1.31
YGR039W	YGR039W	ORC6	P38826	435 aa		6.88	□□□□□ -1.31
YGR039W	YGR039W	CSC1	Q06538	782 aa		6.88	□□□□□ -1.31
YGR039W	YGR039W	TFB4	Q12004	338 aa		6.87	□□□□□ -1.31
YGR039W	YGR039W	CKB1	P43639	278 aa		6.86	□□□□□ -1.31
YGR039W	YGR039W	DMA1	P38823	416 aa		6.85	□□□□□ -1.31
YGR039W	YGR039W	PEX21	P50091	288 aa		6.85	□□□□□ -1.31
YGR039W	YGR039W	SAS10	Q12136	610 aa	Predicted RBP	6.83	□□□□□ -1.32
YGR039W	YGR039W	YRR1	Q12172	810 aa		6.83	□□□□□ -1.32
YGR039W	YGR039W	SAS4	Q04003	481 aa		6.81	□□□□□ -1.32
YGR039W	YGR039W	GYP1	Q08484	637 aa		6.81	□□□□□ -1.32
YGR039W	YGR039W	PBS2	P08018	668 aa		6.8	□□□□□ -1.32
YGR039W	YGR039W	TUM1	Q08686	304 aa	Known RBP	6.79	□□□□□ -1.32
YGR039W	YGR039W	MVP1	P40959	511 aa	Known RBP	6.78	□□□□□ -1.32
YGR039W	YGR039W	STR2	P47164	639 aa		6.77	□□□□□ -1.33
YGR039W	YGR039W	BUD20	Q08004	166 aa	Predicted RBP	6.77	□□□□□ -1.33
YGR039W	YGR039W	NUD1	P32336	851 aa		6.76	□□□□□ -1.33
YGR039W	YGR039W	RGR1	P19263	1082 aa		6.75	□□□□□ -1.33
YGR039W	YGR039W	SDH2	P21801	266 aa		6.75	□□□□□ -1.33
YGR039W	YGR039W	ISM1	P48526	1002 aa		6.75	□□□□□ -1.33
YGR039W	YGR039W	SRC1	Q03707	834 aa		6.75	□□□□□ -1.33
YGR039W	YGR039W	PRT1	P06103	763 aa	Known RBP	6.74	□□□□□ -1.33
YGR039W	YGR039W	AMS1	P22855	1083 aa		6.74	□□□□□ -1.33
YGR039W	YGR039W	RAS1	P01119	309 aa		6.73	□□□□□ -1.33
YGR039W	YGR039W	DSF2	P38213	736 aa		6.73	□□□□□ -1.33
YGR039W	YGR039W	PSE1	P32337	1089 aa	Known RBP	6.72	□□□□□ -1.33
YGR039W	YGR039W	YPR109W	Q06104	294 aa		6.72	□□□□□ -1.33
YGR039W	YGR039W	MAM3	Q12296	706 aa		6.72	□□□□□ -1.33
YGR039W	YGR039W	NPL4	P33755	580 aa		6.71	□□□□□ -1.34
YGR039W	YGR039W	YEL077C	Q3E7X8	1277 aa		6.71	□□□□□ -1.34
YGR039W	YGR039W	MRF1	P30775	413 aa	Predicted RBP	6.7	□□□□□ -1.34
YGR039W	YGR039W	TY1A-DR4	O74302	440 aa		6.69	□□□□□ -1.34
YGR039W	YGR039W	TY1A-H	P0C2I4	478 aa	Known RBP	6.69	□□□□□ -1.34
YGR039W	YGR039W	TY1A-A	P0CX57	440 aa		6.69	□□□□□ -1.34
YGR039W	YGR039W	TY1A-PR1	P0CX58	440 aa		6.69	□□□□□ -1.34
YGR039W	YGR039W	TY1A-OR	P0CX59	440 aa		6.69	□□□□□ -1.34
YGR039W	YGR039W	TY1A-PR2	P0CX60	440 aa		6.69	□□□□□ -1.34
YGR039W	YGR039W	TY1A-DR5	P0CX65	440 aa		6.69	□□□□□ -1.34
YGR039W	YGR039W	TY1A-ER2	P0CX66	440 aa		6.69	□□□□□ -1.34
YGR039W	YGR039W	TY1A-GR3	P0CX67	440 aa		6.69	□□□□□ -1.34

Retrieved 100 of 5,963 RNA–protein pairs in 8.5 ms