RNA–Protein interactions for RNA: YFR027W

ECO1, Transcript of Acetyltransferase, yeast

Gene ECO1, Length 846 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ECO1	YFR027W	HTA1	P04911	132 aa	Known RBP	6.76	□□□□□ -1.33
ECO1	YFR027W	HTA2	P04912	132 aa		6.76	□□□□□ -1.33
ECO1	YFR027W	DCW1	P36091	449 aa		6.76	□□□□□ -1.33
ECO1	YFR027W	PTC4	P38089	393 aa		6.75	□□□□□ -1.33
ECO1	YFR027W	YEL023C	P39992	682 aa		6.74	□□□□□ -1.33
ECO1	YFR027W	YDR344C	Q05510	147 aa		6.71	□□□□□ -1.34
ECO1	YFR027W	VRP1	P37370	817 aa		6.64	□□□□□ -1.35
ECO1	YFR027W	XDJ1	P39102	459 aa		6.64	□□□□□ -1.35
ECO1	YFR027W	PML39	Q03760	334 aa		6.62	□□□□□ -1.35
ECO1	YFR027W	GRE2	Q12068	342 aa	Known RBP	6.6	□□□□□ -1.35
ECO1	YFR027W	ELP4	Q02884	456 aa	Known RBP	6.58	□□□□□ -1.36
ECO1	YFR027W	NST1	P53935	1240 aa		6.57	□□□□□ -1.36
ECO1	YFR027W	EDS1	P38073	919 aa		6.55	□□□□□ -1.36
ECO1	YFR027W	ARH1	P48360	493 aa		6.54	□□□□□ -1.36
ECO1	YFR027W	MID1	P41821	548 aa		6.53	□□□□□ -1.36
ECO1	YFR027W	DPS1	P04802	557 aa	Known RBP	6.52	□□□□□ -1.37
ECO1	YFR027W	GUT1	P32190	709 aa		6.52	□□□□□ -1.37
ECO1	YFR027W	PTC3	P34221	468 aa	Known RBP	6.52	□□□□□ -1.37
ECO1	YFR027W	ATH1	P48016	1211 aa		6.52	□□□□□ -1.37
ECO1	YFR027W	MAK11	P20484	414 aa	Known RBP	6.51	□□□□□ -1.37
ECO1	YFR027W	MIF2	P35201	549 aa		6.51	□□□□□ -1.37
ECO1	YFR027W	SOL3	P38858	249 aa		6.5	□□□□□ -1.37
ECO1	YFR027W	RAM2	P29703	316 aa		6.49	□□□□□ -1.37
ECO1	YFR027W	SPT23	P35210	1082 aa		6.45	□□□□□ -1.38
ECO1	YFR027W	ILV3	P39522	585 aa	Known RBP	6.45	□□□□□ -1.38
ECO1	YFR027W	SRC1	Q03707	834 aa		6.45	□□□□□ -1.38
ECO1	YFR027W	MPH3	P0CE00	602 aa		6.44	□□□□□ -1.38
ECO1	YFR027W	AI4	P03878	556 aa		6.43	□□□□□ -1.38
ECO1	YFR027W	COQ8	P27697	501 aa		6.42	□□□□□ -1.38
ECO1	YFR027W	HAP5	Q02516	242 aa		6.41	□□□□□ -1.38
ECO1	YFR027W	PEX29	Q03370	554 aa		6.41	□□□□□ -1.38
ECO1	YFR027W	BNI4	P53858	892 aa		6.39	□□□□□ -1.39
ECO1	YFR027W	RGA2	Q06407	1009 aa		6.39	□□□□□ -1.39
ECO1	YFR027W	YML082W	Q04533	649 aa	Known RBP	6.37	□□□□□ -1.39
ECO1	YFR027W	MPC54	Q08550	464 aa		6.36	□□□□□ -1.39
ECO1	YFR027W	RQC2	Q12532	1038 aa	Known RBP	6.36	□□□□□ -1.39
ECO1	YFR027W	PTC2	P39966	464 aa	Known RBP	6.33	□□□□□ -1.4
ECO1	YFR027W	YGR273C	P53329	174 aa		6.33	□□□□□ -1.4
ECO1	YFR027W	DMA1	P38823	416 aa		6.3	□□□□□ -1.4
ECO1	YFR027W	RGA1	P39083	1007 aa		6.29	□□□□□ -1.4
ECO1	YFR027W	NMA111	P53920	997 aa		6.29	□□□□□ -1.4
ECO1	YFR027W	SLI15	P38283	698 aa		6.28	□□□□□ -1.4
ECO1	YFR027W	RAS1	P01119	309 aa		6.27	□□□□□ -1.41
ECO1	YFR027W	NOP53	Q12080	455 aa	Known RBP	6.27	□□□□□ -1.41
ECO1	YFR027W	YPR015C	Q12531	247 aa		6.27	□□□□□ -1.41
ECO1	YFR027W	DPL1	Q05567	589 aa		6.24	□□□□□ -1.41
ECO1	YFR027W	RAM1	P22007	431 aa		6.23	□□□□□ -1.41
ECO1	YFR027W	SET1	P38827	1080 aa	Known RBP	6.22	□□□□□ -1.41
ECO1	YFR027W	KEX1	P09620	729 aa		6.16	□□□□□ -1.42
ECO1	YFR027W	ISU2	Q12056	156 aa		6.16	□□□□□ -1.42
ECO1	YFR027W	SDH2	P21801	266 aa		6.14	□□□□□ -1.43
ECO1	YFR027W	AMS1	P22855	1083 aa		6.14	□□□□□ -1.43
ECO1	YFR027W	IFH1	P39520	1085 aa		6.14	□□□□□ -1.43
ECO1	YFR027W	YPR148C	Q06523	435 aa		6.14	□□□□□ -1.43
ECO1	YFR027W	CDC73	Q06697	393 aa		6.14	□□□□□ -1.43
ECO1	YFR027W	SAS10	Q12136	610 aa	Predicted RBP	6.13	□□□□□ -1.43
ECO1	YFR027W	TRK1	P12685	1235 aa		6.12	□□□□□ -1.43
ECO1	YFR027W	PDR1	P12383	1068 aa		6.11	□□□□□ -1.43
ECO1	YFR027W	GYP1	Q08484	637 aa		6.11	□□□□□ -1.43
ECO1	YFR027W	YLR326W	Q06170	240 aa	Known RBP	6.08	□□□□□ -1.44
ECO1	YFR027W	UBP14	P38237	781 aa	Known RBP	6.07	□□□□□ -1.44
ECO1	YFR027W	SAS4	Q04003	481 aa		6.06	□□□□□ -1.44
ECO1	YFR027W	VPS70	P47161	811 aa		6.04	□□□□□ -1.44
ECO1	YFR027W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	6.03	□□□□□ -1.44	not detected
ECO1	YFR027W	VHR2	P40041	505 aa		6.02	□□□□□ -1.45
ECO1	YFR027W	CKB1	P43639	278 aa		6.01	□□□□□ -1.45
ECO1	YFR027W	YEL077C	Q3E7X8	1277 aa		6	□□□□□ -1.45
ECO1	YFR027W	RAD54	P32863	898 aa		5.98	□□□□□ -1.45
ECO1	YFR027W	BUD20	Q08004	166 aa	Predicted RBP	5.98	□□□□□ -1.45
ECO1	YFR027W	REF2	P42073	533 aa	Predicted RBP	5.97	□□□□□ -1.45
ECO1	YFR027W	YPL062W	Q02781	134 aa		5.97	□□□□□ -1.45
ECO1	YFR027W	STR2	P47164	639 aa		5.94	□□□□□ -1.46
ECO1	YFR027W	PRT1	P06103	763 aa	Known RBP	5.93	□□□□□ -1.46
ECO1	YFR027W	MRF1	P30775	413 aa	Predicted RBP	5.93	□□□□□ -1.46
ECO1	YFR027W	YDR090C	Q03193	310 aa		5.93	□□□□□ -1.46
ECO1	YFR027W	MAK21	Q12176	1025 aa	Known RBP	5.93	□□□□□ -1.46
ECO1	YFR027W	RPP1B	P10622	106 aa	Known RBP	5.92	□□□□□ -1.46
ECO1	YFR027W	GAP1	P19145	602 aa	Predicted RBP	5.92	□□□□□ -1.46
ECO1	YFR027W	YRR1	Q12172	810 aa		5.92	□□□□□ -1.46
ECO1	YFR027W	AIR1	P40507	360 aa	Known RBP	5.91	□□□□□ -1.46
ECO1	YFR027W	ISM1	P48526	1002 aa		5.91	□□□□□ -1.46
ECO1	YFR027W	PBS2	P08018	668 aa		5.9	□□□□□ -1.46
ECO1	YFR027W	DSF2	P38213	736 aa		5.9	□□□□□ -1.46
ECO1	YFR027W	CST6	P40535	587 aa		5.9	□□□□□ -1.46
ECO1	YFR027W	COX6	P00427	148 aa		5.89	□□□□□ -1.47
ECO1	YFR027W	CLA4	P48562	842 aa		5.89	□□□□□ -1.47
ECO1	YFR027W	BRE2	P43132	505 aa		5.88	□□□□□ -1.47
ECO1	YFR027W	NUD1	P32336	851 aa		5.86	□□□□□ -1.47
ECO1	YFR027W	ERG12	P07277	443 aa		5.85	□□□□□ -1.47
ECO1	YFR027W	SPB4	P25808	606 aa	Predicted RBP	5.85	□□□□□ -1.47
ECO1	YFR027W	KIC1	P38692	1080 aa		5.85	□□□□□ -1.47
ECO1	YFR027W	PEX21	P50091	288 aa		5.85	□□□□□ -1.47
ECO1	YFR027W	TFB4	Q12004	338 aa		5.85	□□□□□ -1.47
ECO1	YFR027W	TY1A-DR4	O74302	440 aa		5.84	□□□□□ -1.47
ECO1	YFR027W	TY1A-H	P0C2I4	478 aa	Known RBP	5.84	□□□□□ -1.47
ECO1	YFR027W	TY1A-A	P0CX57	440 aa		5.84	□□□□□ -1.47
ECO1	YFR027W	TY1A-PR1	P0CX58	440 aa		5.84	□□□□□ -1.47
ECO1	YFR027W	TY1A-OR	P0CX59	440 aa		5.84	□□□□□ -1.47
ECO1	YFR027W	TY1A-PR2	P0CX60	440 aa		5.84	□□□□□ -1.47
ECO1	YFR027W	TY1A-DR5	P0CX65	440 aa		5.84	□□□□□ -1.47

Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms