RNA–Protein interactions for RNA: YDR064W

RPS13, Transcript of Protein component of the small (40S) ribosomal subunit, yeast

Gene RPS13, Length 456 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPS13	YDR064W	BMT6	Q12291	365 aa		5.7	□□□□□ -1.5
RPS13	YDR064W	DAN4	P47179	1161 aa		5.69	□□□□□ -1.5
RPS13	YDR064W	HTA1	P04911	132 aa	Known RBP	5.68	□□□□□ -1.5
RPS13	YDR064W	HTA2	P04912	132 aa		5.68	□□□□□ -1.5
RPS13	YDR064W	COQ8	P27697	501 aa		5.68	□□□□□ -1.5
RPS13	YDR064W	PTC3	P34221	468 aa	Known RBP	5.68	□□□□□ -1.5
RPS13	YDR064W	SEC61	P32915	480 aa		5.67	□□□□□ -1.5
RPS13	YDR064W	GRE2	Q12068	342 aa	Known RBP	5.67	□□□□□ -1.5
RPS13	YDR064W	YEL023C	P39992	682 aa		5.66	□□□□□ -1.5
RPS13	YDR064W	ABP1	P15891	592 aa	Known RBP	5.65	□□□□□ -1.5
RPS13	YDR064W	ATH1	P48016	1211 aa		5.63	□□□□□ -1.51
RPS13	YDR064W	JIP4	Q03361	876 aa		5.63	□□□□□ -1.51
RPS13	YDR064W	SAP30	P38429	201 aa		5.62	□□□□□ -1.51
RPS13	YDR064W	KOG1	P38873	1557 aa		5.62	□□□□□ -1.51
RPS13	YDR064W	PTC4	P38089	393 aa		5.61	□□□□□ -1.51
RPS13	YDR064W	SOL3	P38858	249 aa		5.61	□□□□□ -1.51
RPS13	YDR064W	NST1	P53935	1240 aa		5.61	□□□□□ -1.51
RPS13	YDR064W	YDR344C	Q05510	147 aa		5.61	□□□□□ -1.51
RPS13	YDR064W	GUT1	P32190	709 aa		5.6	□□□□□ -1.51
RPS13	YDR064W	TFG1	P41895	735 aa	Predicted RBP	5.58	□□□□□ -1.52
RPS13	YDR064W	YDL129W	Q07555	291 aa		5.58	□□□□□ -1.52
RPS13	YDR064W	SPA2	P23201	1466 aa	Known RBP	5.58	□□□□□ -1.52
RPS13	YDR064W	ILV3	P39522	585 aa	Known RBP	5.57	□□□□□ -1.52
RPS13	YDR064W	PML39	Q03760	334 aa		5.56	□□□□□ -1.52
RPS13	YDR064W	SWR1	Q05471	1514 aa		5.56	□□□□□ -1.52
RPS13	YDR064W	MID1	P41821	548 aa		5.54	□□□□□ -1.52
RPS13	YDR064W	MPH3	P0CE00	602 aa		5.5	□□□□□ -1.53
RPS13	YDR064W	YGR273C	P53329	174 aa		5.5	□□□□□ -1.53
RPS13	YDR064W	CAB3	P36076	571 aa		5.49	□□□□□ -1.53
RPS13	YDR064W	PRE3	P38624	215 aa		5.49	□□□□□ -1.53
RPS13	YDR064W	SET1	P38827	1080 aa	Known RBP	5.49	□□□□□ -1.53
RPS13	YDR064W	AI4	P03878	556 aa		5.48	□□□□□ -1.53
RPS13	YDR064W	EBP2	P36049	427 aa	Known RBP	5.48	□□□□□ -1.53
RPS13	YDR064W	NOP53	Q12080	455 aa	Known RBP	5.48	□□□□□ -1.53
RPS13	YDR064W	CHL1	P22516	861 aa	Predicted RBP	5.47	□□□□□ -1.53
RPS13	YDR064W	SIS2	P36024	562 aa		5.46	□□□□□ -1.54
RPS13	YDR064W	ELP4	Q02884	456 aa	Known RBP	5.44	□□□□□ -1.54
RPS13	YDR064W	PEX29	Q03370	554 aa		5.44	□□□□□ -1.54
RPS13	YDR064W	BCK2	P33306	851 aa		5.42	□□□□□ -1.54
RPS13	YDR064W	SLI15	P38283	698 aa		5.42	□□□□□ -1.54
RPS13	YDR064W	KEX1	P09620	729 aa		5.41	□□□□□ -1.54
RPS13	YDR064W	VHR2	P40041	505 aa		5.41	□□□□□ -1.54
RPS13	YDR064W	ARH1	P48360	493 aa		5.41	□□□□□ -1.54
RPS13	YDR064W	MPC54	Q08550	464 aa		5.41	□□□□□ -1.54
RPS13	YDR064W	NOP2	P40991	618 aa	Known RBP	5.4	□□□□□ -1.54
RPS13	YDR064W	YRB30	P53107	440 aa	Predicted RBP	5.4	□□□□□ -1.54
RPS13	YDR064W	YLR326W	Q06170	240 aa	Known RBP	5.4	□□□□□ -1.54
RPS13	YDR064W	UBP14	P38237	781 aa	Known RBP	5.39	□□□□□ -1.55
RPS13	YDR064W	VRP1	P37370	817 aa		5.38	□□□□□ -1.55
RPS13	YDR064W	HAP5	Q02516	242 aa		5.36	□□□□□ -1.55
RPS13	YDR064W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	5.35	□□□□□ -1.55	not detected
RPS13	YDR064W	CDC73	Q06697	393 aa		5.35	□□□□□ -1.55
RPS13	YDR064W	SPT23	P35210	1082 aa		5.34	□□□□□ -1.55
RPS13	YDR064W	NMA111	P53920	997 aa		5.34	□□□□□ -1.55
RPS13	YDR064W	DPL1	Q05567	589 aa		5.34	□□□□□ -1.55
RPS13	YDR064W	YDR090C	Q03193	310 aa		5.32	□□□□□ -1.56
RPS13	YDR064W	NAP1	P25293	417 aa	Known RBP	5.31	□□□□□ -1.56
RPS13	YDR064W	RAD54	P32863	898 aa		5.31	□□□□□ -1.56
RPS13	YDR064W	YFR016C	P43597	1233 aa	Known RBP	5.31	□□□□□ -1.56
RPS13	YDR064W	RPS0B	P46654	252 aa	Known RBP	5.31	□□□□□ -1.56
RPS13	YDR064W	BNI4	P53858	892 aa		5.31	□□□□□ -1.56
RPS13	YDR064W	YPR148C	Q06523	435 aa		5.31	□□□□□ -1.56
RPS13	YDR064W	YPR015C	Q12531	247 aa		5.31	□□□□□ -1.56
RPS13	YDR064W	AIM44	Q99299	758 aa		5.3	□□□□□ -1.56
RPS13	YDR064W	XDJ1	P39102	459 aa		5.29	□□□□□ -1.56
RPS13	YDR064W	VPS70	P47161	811 aa		5.29	□□□□□ -1.56
RPS13	YDR064W	PTC2	P39966	464 aa	Known RBP	5.28	□□□□□ -1.56
RPS13	YDR064W	PDR1	P12383	1068 aa		5.27	□□□□□ -1.57
RPS13	YDR064W	IFH1	P39520	1085 aa		5.27	□□□□□ -1.57
RPS13	YDR064W	RAM1	P22007	431 aa		5.26	□□□□□ -1.57
RPS13	YDR064W	YML082W	Q04533	649 aa	Known RBP	5.26	□□□□□ -1.57
RPS13	YDR064W	ISU2	Q12056	156 aa		5.26	□□□□□ -1.57
RPS13	YDR064W	MNN4	P36044	1178 aa		5.25	□□□□□ -1.57
RPS13	YDR064W	REF2	P42073	533 aa	Predicted RBP	5.25	□□□□□ -1.57
RPS13	YDR064W	DMA1	P38823	416 aa		5.24	□□□□□ -1.57
RPS13	YDR064W	LEO1	P38439	464 aa		5.22	□□□□□ -1.57
RPS13	YDR064W	KIC1	P38692	1080 aa		5.22	□□□□□ -1.57
RPS13	YDR064W	TY1B-DR4	Q07793	1604 aa		5.21	□□□□□ -1.58
RPS13	YDR064W	DPS1	P04802	557 aa	Known RBP	5.2	□□□□□ -1.58
RPS13	YDR064W	ORC6	P38826	435 aa		5.2	□□□□□ -1.58
RPS13	YDR064W	GAP1	P19145	602 aa	Predicted RBP	5.19	□□□□□ -1.58
RPS13	YDR064W	KRI1	P42846	591 aa	Known RBP	5.19	□□□□□ -1.58
RPS13	YDR064W	YRR1	Q12172	810 aa		5.19	□□□□□ -1.58
RPS13	YDR064W	COX6	P00427	148 aa		5.16	□□□□□ -1.58
RPS13	YDR064W	RAS1	P01119	309 aa		5.15	□□□□□ -1.59
RPS13	YDR064W	SDH2	P21801	266 aa		5.15	□□□□□ -1.59
RPS13	YDR064W	STR2	P47164	639 aa		5.15	□□□□□ -1.59
RPS13	YDR064W	IOC4	Q04213	475 aa		5.15	□□□□□ -1.59
RPS13	YDR064W	TUM1	Q08686	304 aa	Known RBP	5.15	□□□□□ -1.59
RPS13	YDR064W	RPP1B	P10622	106 aa	Known RBP	5.14	□□□□□ -1.59
RPS13	YDR064W	ISM1	P48526	1002 aa		5.14	□□□□□ -1.59
RPS13	YDR064W	PEX21	P50091	288 aa		5.14	□□□□□ -1.59
RPS13	YDR064W	GYP1	Q08484	637 aa		5.14	□□□□□ -1.59
RPS13	YDR064W	PBS2	P08018	668 aa		5.13	□□□□□ -1.59
RPS13	YDR064W	SRC1	Q03707	834 aa		5.13	□□□□□ -1.59
RPS13	YDR064W	CSC1	Q06538	782 aa		5.13	□□□□□ -1.59
RPS13	YDR064W	BUD20	Q08004	166 aa	Predicted RBP	5.13	□□□□□ -1.59
RPS13	YDR064W	TCB3	Q03640	1545 aa	Known RBP	5.13	□□□□□ -1.59
RPS13	YDR064W	NUD1	P32336	851 aa		5.12	□□□□□ -1.59
RPS13	YDR064W	MVP1	P40959	511 aa	Known RBP	5.12	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 9.4 ms