RNA–Protein interactions for RNA: YDL190C

UFD2, Transcript of Ubiquitin chain assembly factor (E4), yeastyeast

Gene UFD2, Length 2,886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD2YDL190C COQ8P27697 501 aa3.29□□□□□ -1.88
UFD2YDL190C SEC61P32915 480 aa3.29□□□□□ -1.88
UFD2YDL190C PTC3P34221 468 aaKnown RBP3.28□□□□□ -1.88
UFD2YDL190C EDS1P38073 919 aa3.28□□□□□ -1.88
UFD2YDL190C JIP4Q03361 876 aa3.28□□□□□ -1.88
UFD2YDL190C YEL023CP39992 682 aa3.28□□□□□ -1.88
UFD2YDL190C PTC4P38089 393 aa3.26□□□□□ -1.89
UFD2YDL190C SAP30P38429 201 aa3.26□□□□□ -1.89
UFD2YDL190C GUT1P32190 709 aa3.26□□□□□ -1.89
UFD2YDL190C DAN4P47179 1161 aa3.25□□□□□ -1.89
UFD2YDL190C YDL129WQ07555 291 aa3.24□□□□□ -1.89
UFD2YDL190C RQC2Q12532 1038 aaKnown RBP3.23□□□□□ -1.89
UFD2YDL190C PML39Q03760 334 aa3.22□□□□□ -1.89
UFD2YDL190C SET1P38827 1080 aaKnown RBP3.2□□□□□ -1.9
UFD2YDL190C PEX29Q03370 554 aa3.2□□□□□ -1.9
UFD2YDL190C NOP53Q12080 455 aaKnown RBP3.2□□□□□ -1.9
UFD2YDL190C SOL3P38858 249 aa3.19□□□□□ -1.9
UFD2YDL190C MID1P41821 548 aa3.19□□□□□ -1.9
UFD2YDL190C ELP4Q02884 456 aaKnown RBP3.19□□□□□ -1.9
UFD2YDL190C CHL1P22516 861 aaPredicted RBP3.18□□□□□ -1.9
UFD2YDL190C PRE3P38624 215 aa3.18□□□□□ -1.9
UFD2YDL190C YGR273CP53329 174 aa3.18□□□□□ -1.9
UFD2YDL190C MPH3P0CE00 602 aa3.17□□□□□ -1.9
UFD2YDL190C AI4P03878 556 aa3.17□□□□□ -1.9
UFD2YDL190C NST1P53935 1240 aa3.16□□□□□ -1.9
UFD2YDL190C YDR344CQ05510 147 aa3.15□□□□□ -1.9
UFD2YDL190C ILV3P39522 585 aaKnown RBP3.15□□□□□ -1.91
UFD2YDL190C BCK2P33306 851 aa3.14□□□□□ -1.91
UFD2YDL190C VHR2P40041 505 aa3.14□□□□□ -1.91
UFD2YDL190C ARH1P48360 493 aa3.13□□□□□ -1.91
UFD2YDL190C KEX1P09620 729 aa3.12□□□□□ -1.91
UFD2YDL190C VRP1P37370 817 aa3.12□□□□□ -1.91
UFD2YDL190C SLI15P38283 698 aa3.12□□□□□ -1.91
UFD2YDL190C IFH1P39520 1085 aa3.12□□□□□ -1.91
UFD2YDL190C MPC54Q08550 464 aa3.12□□□□□ -1.91
UFD2YDL190C HAP5Q02516 242 aa3.11□□□□□ -1.91
UFD2YDL190C SPT23P35210 1082 aa3.11□□□□□ -1.91
UFD2YDL190C NMA111P53920 997 aa3.1□□□□□ -1.91
UFD2YDL190C RAD54P32863 898 aa3.1□□□□□ -1.91
UFD2YDL190C VPS70P47161 811 aa3.1□□□□□ -1.91
UFD2YDL190C DPL1Q05567 589 aa3.1□□□□□ -1.91
UFD2YDL190C YLR326WQ06170 240 aaKnown RBP3.1□□□□□ -1.91
UFD2YDL190C UBP14P38237 781 aaKnown RBP3.1□□□□□ -1.91
UFD2YDL190C KIC1P38692 1080 aa3.1□□□□□ -1.91
UFD2YDL190C PTC2P39966 464 aaKnown RBP3.09□□□□□ -1.91
UFD2YDL190C CDC73Q06697 393 aa3.09□□□□□ -1.92
UFD2YDL190C RPP1BP10622 106 aaKnown RBP3.08□□□□□ -1.92
UFD2YDL190C PCS60P38137 543 aaKnown RBP RIP-Chip data3.07□□□□□ -1.92not detected
UFD2YDL190C DMA1P38823 416 aa3.07□□□□□ -1.92
UFD2YDL190C REF2P42073 533 aaPredicted RBP3.07□□□□□ -1.92
UFD2YDL190C BNI4P53858 892 aa3.07□□□□□ -1.92
UFD2YDL190C XDJ1P39102 459 aa3.07□□□□□ -1.92
UFD2YDL190C ISU2Q12056 156 aa3.07□□□□□ -1.92
UFD2YDL190C PEX21P50091 288 aa3.05□□□□□ -1.92
UFD2YDL190C YPR148CQ06523 435 aa3.05□□□□□ -1.92
UFD2YDL190C YDR090CQ03193 310 aa3.04□□□□□ -1.92
UFD2YDL190C YML082WQ04533 649 aaKnown RBP3.04□□□□□ -1.92
UFD2YDL190C PDR1P12383 1068 aa3.02□□□□□ -1.93
UFD2YDL190C DPS1P04802 557 aaKnown RBP3.02□□□□□ -1.93
UFD2YDL190C YRR1Q12172 810 aa3.02□□□□□ -1.93
UFD2YDL190C GYP1Q08484 637 aa3.02□□□□□ -1.93
UFD2YDL190C TUM1Q08686 304 aaKnown RBP3.01□□□□□ -1.93
UFD2YDL190C MAK21Q12176 1025 aaKnown RBP3.01□□□□□ -1.93
UFD2YDL190C COX6P00427 148 aa3.01□□□□□ -1.93
UFD2YDL190C CKB1P43639 278 aa3.01□□□□□ -1.93
UFD2YDL190C YPR015CQ12531 247 aa3.01□□□□□ -1.93
UFD2YDL190C CSC1Q06538 782 aa3□□□□□ -1.93
UFD2YDL190C PBS2P08018 668 aa3□□□□□ -1.93
UFD2YDL190C RAM1P22007 431 aa2.99□□□□□ -1.93
UFD2YDL190C TFB4Q12004 338 aa2.99□□□□□ -1.93
UFD2YDL190C NPL4P33755 580 aa2.98□□□□□ -1.93
UFD2YDL190C SPB4P25808 606 aaPredicted RBP2.98□□□□□ -1.93
UFD2YDL190C ORC6P38826 435 aa2.98□□□□□ -1.93
UFD2YDL190C MON2P48563 1636 aaPredicted RBP2.97□□□□□ -1.93
UFD2YDL190C NUD1P32336 851 aa2.97□□□□□ -1.93
UFD2YDL190C GCD11P32481 527 aaKnown RBP2.97□□□□□ -1.93
UFD2YDL190C YPR109WQ06104 294 aa2.97□□□□□ -1.93
UFD2YDL190C MAM3Q12296 706 aa2.96□□□□□ -1.94
UFD2YDL190C GAP1P19145 602 aaPredicted RBP2.96□□□□□ -1.94
UFD2YDL190C MVP1P40959 511 aaKnown RBP2.96□□□□□ -1.94
UFD2YDL190C ISM1P48526 1002 aa2.96□□□□□ -1.94
UFD2YDL190C SAS4Q04003 481 aa2.96□□□□□ -1.94
UFD2YDL190C PRT1P06103 763 aaKnown RBP2.95□□□□□ -1.94
UFD2YDL190C BUD20Q08004 166 aaPredicted RBP2.95□□□□□ -1.94
UFD2YDL190C RAS1P01119 309 aa2.95□□□□□ -1.94
UFD2YDL190C RGR1P19263 1082 aa2.95□□□□□ -1.94
UFD2YDL190C STR2P47164 639 aa2.95□□□□□ -1.94
UFD2YDL190C IES2P40154 320 aa2.94□□□□□ -1.94
UFD2YDL190C SAS10Q12136 610 aaPredicted RBP2.94□□□□□ -1.94
UFD2YDL190C MRF1P30775 413 aaPredicted RBP2.94□□□□□ -1.94
UFD2YDL190C YEL077CQ3E7X8 1277 aa2.94□□□□□ -1.94
UFD2YDL190C ERG12P07277 443 aa2.93□□□□□ -1.94
UFD2YDL190C AMS1P22855 1083 aa2.93□□□□□ -1.94
UFD2YDL190C SPT16P32558 1035 aaKnown RBP2.93□□□□□ -1.94
UFD2YDL190C DSF2P38213 736 aa2.92□□□□□ -1.94
UFD2YDL190C PSE1P32337 1089 aaKnown RBP2.92□□□□□ -1.94
UFD2YDL190C KEX2P13134 814 aa2.91□□□□□ -1.94
UFD2YDL190C PAT1P25644 796 aaKnown RBP2.91□□□□□ -1.94
UFD2YDL190C RRN7P40992 514 aa2.9□□□□□ -1.94
UFD2YDL190C CLB5P30283 435 aa2.9□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 66.9 ms