RNA–Protein interactions for RNA: YDL043C

PRP11, Transcript of Subunit of the SF3a splicing factor complex, yeastyeast

Gene PRP11, Length 801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP11YDL043C CST9Q06032 482 aa6.79□□□□□ -1.32
PRP11YDL043C RGA2Q06407 1009 aa6.79□□□□□ -1.32
PRP11YDL043C XDJ1P39102 459 aa6.75□□□□□ -1.33
PRP11YDL043C STS1P38637 319 aa6.74□□□□□ -1.33
PRP11YDL043C VRP1P37370 817 aa6.72□□□□□ -1.33
PRP11YDL043C ABP1P15891 592 aaKnown RBP6.69□□□□□ -1.34
PRP11YDL043C PTC4P38089 393 aa6.68□□□□□ -1.34
PRP11YDL043C RTG3P38165 486 aa6.68□□□□□ -1.34
PRP11YDL043C GYP5Q12344 894 aa6.67□□□□□ -1.34
PRP11YDL043C DPS1P04802 557 aaKnown RBP6.66□□□□□ -1.34
PRP11YDL043C HTA1P04911 132 aaKnown RBP6.66□□□□□ -1.34
PRP11YDL043C HTA2P04912 132 aa6.66□□□□□ -1.34
PRP11YDL043C YEL023CP39992 682 aa6.64□□□□□ -1.35
PRP11YDL043C YDR344CQ05510 147 aa6.64□□□□□ -1.35
PRP11YDL043C DCW1P36091 449 aa6.63□□□□□ -1.35
PRP11YDL043C RPN1P38764 993 aaKnown RBP6.63□□□□□ -1.35
PRP11YDL043C RAM2P29703 316 aa6.62□□□□□ -1.35
PRP11YDL043C SET1P38827 1080 aaKnown RBP6.59□□□□□ -1.35
PRP11YDL043C RGA1P39083 1007 aa6.58□□□□□ -1.36
PRP11YDL043C ELP4Q02884 456 aaKnown RBP6.58□□□□□ -1.36
PRP11YDL043C CKB1P43639 278 aa6.56□□□□□ -1.36
PRP11YDL043C YPR148CQ06523 435 aa6.56□□□□□ -1.36
PRP11YDL043C PML39Q03760 334 aa6.55□□□□□ -1.36
PRP11YDL043C SPB4P25808 606 aaPredicted RBP6.54□□□□□ -1.36
PRP11YDL043C RCR1P38212 213 aa6.54□□□□□ -1.36
PRP11YDL043C IFH1P39520 1085 aa6.53□□□□□ -1.36
PRP11YDL043C VPS70P47161 811 aa6.53□□□□□ -1.36
PRP11YDL043C SRC1Q03707 834 aa6.53□□□□□ -1.36
PRP11YDL043C DMA2P53924 522 aa6.52□□□□□ -1.37
PRP11YDL043C MAK11P20484 414 aaKnown RBP6.48□□□□□ -1.37
PRP11YDL043C ARH1P48360 493 aa6.48□□□□□ -1.37
PRP11YDL043C DSF2P38213 736 aa6.43□□□□□ -1.38
PRP11YDL043C SPT23P35210 1082 aa6.41□□□□□ -1.38
PRP11YDL043C MID1P41821 548 aa6.41□□□□□ -1.38
PRP11YDL043C GRE2Q12068 342 aaKnown RBP6.41□□□□□ -1.38
PRP11YDL043C PBS2P08018 668 aa6.4□□□□□ -1.38
PRP11YDL043C COQ8P27697 501 aa6.39□□□□□ -1.39
PRP11YDL043C YNR021WP53723 404 aaKnown RBP6.37□□□□□ -1.39
PRP11YDL043C NOP53Q12080 455 aaKnown RBP6.37□□□□□ -1.39
PRP11YDL043C RLF2Q12495 606 aa6.36□□□□□ -1.39
PRP11YDL043C KIN1P13185 1064 aa6.34□□□□□ -1.39
PRP11YDL043C NST1P53935 1240 aa6.33□□□□□ -1.4
PRP11YDL043C REF2P42073 533 aaPredicted RBP6.32□□□□□ -1.4
PRP11YDL043C HAP5Q02516 242 aa6.32□□□□□ -1.4
PRP11YDL043C GUT1P32190 709 aa6.31□□□□□ -1.4
PRP11YDL043C ATH1P48016 1211 aa6.31□□□□□ -1.4
PRP11YDL043C PEX29Q03370 554 aa6.31□□□□□ -1.4
PRP11YDL043C YML082WQ04533 649 aaKnown RBP6.31□□□□□ -1.4
PRP11YDL043C MAM3Q12296 706 aa6.31□□□□□ -1.4
PRP11YDL043C BNI4P53858 892 aa6.3□□□□□ -1.4
PRP11YDL043C MIF2P35201 549 aa6.29□□□□□ -1.4
PRP11YDL043C EDS1P38073 919 aa6.29□□□□□ -1.4
PRP11YDL043C AIM7Q12156 149 aa6.29□□□□□ -1.4
PRP11YDL043C GLC3P32775 704 aa6.28□□□□□ -1.4
PRP11YDL043C IES2P40154 320 aa6.28□□□□□ -1.4
PRP11YDL043C RAS1P01119 309 aa6.27□□□□□ -1.41
PRP11YDL043C PTC2P39966 464 aaKnown RBP6.27□□□□□ -1.41
PRP11YDL043C NUP42P49686 430 aaKnown RBP6.26□□□□□ -1.41
PRP11YDL043C MAK21Q12176 1025 aaKnown RBP6.26□□□□□ -1.41
PRP11YDL043C DIT2P21595 489 aa6.25□□□□□ -1.41
PRP11YDL043C PTC3P34221 468 aaKnown RBP6.25□□□□□ -1.41
PRP11YDL043C SOL3P38858 249 aa6.25□□□□□ -1.41
PRP11YDL043C HGH1P48362 394 aaKnown RBP6.25□□□□□ -1.41
PRP11YDL043C MPH3P0CE00 602 aa6.24□□□□□ -1.41
PRP11YDL043C COX6P00427 148 aa6.22□□□□□ -1.41
PRP11YDL043C AI4P03878 556 aa6.22□□□□□ -1.41
PRP11YDL043C ILV3P39522 585 aaKnown RBP6.2□□□□□ -1.42
PRP11YDL043C ATF2P53296 535 aa6.19□□□□□ -1.42
PRP11YDL043C MPC54Q08550 464 aa6.19□□□□□ -1.42
PRP11YDL043C GUA1P38625 525 aaKnown RBP6.18□□□□□ -1.42
PRP11YDL043C TRK1P12685 1235 aa6.17□□□□□ -1.42
PRP11YDL043C NMA111P53920 997 aa6.16□□□□□ -1.42
PRP11YDL043C HPC2Q01448 625 aa6.14□□□□□ -1.43
PRP11YDL043C UBP14P38237 781 aaKnown RBP6.13□□□□□ -1.43
PRP11YDL043C YPL062WQ02781 134 aa6.13□□□□□ -1.43
PRP11YDL043C YPR015CQ12531 247 aa6.13□□□□□ -1.43
PRP11YDL043C VHR2P40041 505 aa6.12□□□□□ -1.43
PRP11YDL043C YDR090CQ03193 310 aa6.12□□□□□ -1.43
PRP11YDL043C AMS1P22855 1083 aa6.11□□□□□ -1.43
PRP11YDL043C YLR326WQ06170 240 aaKnown RBP6.09□□□□□ -1.43
PRP11YDL043C TFB3Q03290 321 aa6.08□□□□□ -1.44
PRP11YDL043C RAM1P22007 431 aa6.07□□□□□ -1.44
PRP11YDL043C KIC1P38692 1080 aa6.07□□□□□ -1.44
PRP11YDL043C PSE1P32337 1089 aaKnown RBP6.06□□□□□ -1.44
PRP11YDL043C YGR273CP53329 174 aa6.06□□□□□ -1.44
PRP11YDL043C DPL1Q05567 589 aa6.06□□□□□ -1.44
PRP11YDL043C SLI15P38283 698 aa6.05□□□□□ -1.44
PRP11YDL043C SSA2P10592 639 aaKnown RBP6.04□□□□□ -1.44
PRP11YDL043C RAD54P32863 898 aa6.04□□□□□ -1.44
PRP11YDL043C BRL1P38770 471 aa6.04□□□□□ -1.44
PRP11YDL043C GYP1Q08484 637 aa6.04□□□□□ -1.44
PRP11YDL043C CSN12P47130 423 aa6.03□□□□□ -1.44
PRP11YDL043C KEX1P09620 729 aa6.02□□□□□ -1.45
PRP11YDL043C SDH2P21801 266 aa6.02□□□□□ -1.45
PRP11YDL043C PCS60P38137 543 aaKnown RBP RIP-Chip data6.02□□□□□ -1.45not detected
PRP11YDL043C PKC1P24583 1151 aa6.01□□□□□ -1.45
PRP11YDL043C ISU2Q12056 156 aa5.99□□□□□ -1.45
PRP11YDL043C ORC6P38826 435 aa5.98□□□□□ -1.45
PRP11YDL043C BIM1P40013 344 aa5.97□□□□□ -1.45
PRP11YDL043C TEA1P47988 759 aa5.97□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 43.6 ms