RNA–Protein interactions for RNA: YBR254C

TRS20, Transcript of Core component of transport protein particle (TRAPP) complexes I-III, yeastyeast

Gene TRS20, Length 528 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS20YBR254C SEC61P32915 480 aa8.68□□□□□ -1.02
TRS20YBR254C DAN4P47179 1161 aa8.67□□□□□ -1.02
TRS20YBR254C ATH1P48016 1211 aa8.66□□□□□ -1.02
TRS20YBR254C YEL023CP39992 682 aa8.65□□□□□ -1.02
TRS20YBR254C JIP4Q03361 876 aa8.65□□□□□ -1.02
TRS20YBR254C BMT6Q12291 365 aa8.65□□□□□ -1.02
TRS20YBR254C GUT1P32190 709 aa8.63□□□□□ -1.03
TRS20YBR254C PTC4P38089 393 aa8.62□□□□□ -1.03
TRS20YBR254C TFG1P41895 735 aaPredicted RBP8.58□□□□□ -1.04
TRS20YBR254C NOP53Q12080 455 aaKnown RBP8.57□□□□□ -1.04
TRS20YBR254C SOL3P38858 249 aa8.56□□□□□ -1.04
TRS20YBR254C NST1P53935 1240 aa8.55□□□□□ -1.04
TRS20YBR254C SAP30P38429 201 aa8.53□□□□□ -1.04
TRS20YBR254C YDL129WQ07555 291 aa8.53□□□□□ -1.04
TRS20YBR254C SET1P38827 1080 aaKnown RBP8.52□□□□□ -1.05
TRS20YBR254C PML39Q03760 334 aa8.49□□□□□ -1.05
TRS20YBR254C YGR273CP53329 174 aa8.46□□□□□ -1.06
TRS20YBR254C MPH3P0CE00 602 aa8.45□□□□□ -1.06
TRS20YBR254C ILV3P39522 585 aaKnown RBP8.45□□□□□ -1.06
TRS20YBR254C AI4P03878 556 aa8.43□□□□□ -1.06
TRS20YBR254C MID1P41821 548 aa8.43□□□□□ -1.06
TRS20YBR254C YDR344CQ05510 147 aa8.41□□□□□ -1.06
TRS20YBR254C PRE3P38624 215 aa8.36□□□□□ -1.07
TRS20YBR254C CHL1P22516 861 aaPredicted RBP8.35□□□□□ -1.07
TRS20YBR254C KEX1P09620 729 aa8.32□□□□□ -1.08
TRS20YBR254C SLI15P38283 698 aa8.31□□□□□ -1.08
TRS20YBR254C ELP4Q02884 456 aaKnown RBP8.31□□□□□ -1.08
TRS20YBR254C UBP14P38237 781 aaKnown RBP8.3□□□□□ -1.08
TRS20YBR254C PEX29Q03370 554 aa8.3□□□□□ -1.08
TRS20YBR254C IFH1P39520 1085 aa8.29□□□□□ -1.08
TRS20YBR254C VHR2P40041 505 aa8.29□□□□□ -1.08
TRS20YBR254C ARH1P48360 493 aa8.29□□□□□ -1.08
TRS20YBR254C YLR326WQ06170 240 aaKnown RBP8.29□□□□□ -1.08
TRS20YBR254C YPR148CQ06523 435 aa8.28□□□□□ -1.08
TRS20YBR254C MPC54Q08550 464 aa8.27□□□□□ -1.09
TRS20YBR254C DMA1P38823 416 aa8.25□□□□□ -1.09
TRS20YBR254C BCK2P33306 851 aa8.24□□□□□ -1.09
TRS20YBR254C PCS60P38137 543 aaKnown RBP RIP-Chip data8.23□□□□□ -1.09not detected
TRS20YBR254C VPS70P47161 811 aa8.22□□□□□ -1.09
TRS20YBR254C HAP5Q02516 242 aa8.22□□□□□ -1.09
TRS20YBR254C NMA111P53920 997 aa8.2□□□□□ -1.1
TRS20YBR254C DPL1Q05567 589 aa8.2□□□□□ -1.1
TRS20YBR254C RAD54P32863 898 aa8.19□□□□□ -1.1
TRS20YBR254C SPT23P35210 1082 aa8.19□□□□□ -1.1
TRS20YBR254C YDR090CQ03193 310 aa8.19□□□□□ -1.1
TRS20YBR254C CDC73Q06697 393 aa8.19□□□□□ -1.1
TRS20YBR254C VRP1P37370 817 aa8.18□□□□□ -1.1
TRS20YBR254C REF2P42073 533 aaPredicted RBP8.17□□□□□ -1.1
TRS20YBR254C BNI4P53858 892 aa8.15□□□□□ -1.1
TRS20YBR254C ISU2Q12056 156 aa8.12□□□□□ -1.11
TRS20YBR254C KIC1P38692 1080 aa8.11□□□□□ -1.11
TRS20YBR254C PTC2P39966 464 aaKnown RBP8.11□□□□□ -1.11
TRS20YBR254C XDJ1P39102 459 aa8.08□□□□□ -1.12
TRS20YBR254C YML082WQ04533 649 aaKnown RBP8.08□□□□□ -1.12
TRS20YBR254C COX6P00427 148 aa8.06□□□□□ -1.12
TRS20YBR254C YPR015CQ12531 247 aa8.05□□□□□ -1.12
TRS20YBR254C RPP1BP10622 106 aaKnown RBP8.04□□□□□ -1.12
TRS20YBR254C RAM1P22007 431 aa8.04□□□□□ -1.12
TRS20YBR254C SAS10Q12136 610 aaPredicted RBP8.04□□□□□ -1.12
TRS20YBR254C CKB1P43639 278 aa8.03□□□□□ -1.12
TRS20YBR254C MAK21Q12176 1025 aaKnown RBP8.03□□□□□ -1.12
TRS20YBR254C PDR1P12383 1068 aa8.02□□□□□ -1.13
TRS20YBR254C GAP1P19145 602 aaPredicted RBP8.01□□□□□ -1.13
TRS20YBR254C PBS2P08018 668 aa8□□□□□ -1.13
TRS20YBR254C ORC6P38826 435 aa7.99□□□□□ -1.13
TRS20YBR254C PEX21P50091 288 aa7.97□□□□□ -1.13
TRS20YBR254C CSC1Q06538 782 aa7.97□□□□□ -1.13
TRS20YBR254C YRR1Q12172 810 aa7.96□□□□□ -1.14
TRS20YBR254C TUM1Q08686 304 aaKnown RBP7.94□□□□□ -1.14
TRS20YBR254C TFB4Q12004 338 aa7.94□□□□□ -1.14
TRS20YBR254C MVP1P40959 511 aaKnown RBP7.92□□□□□ -1.14
TRS20YBR254C DPS1P04802 557 aaKnown RBP7.9□□□□□ -1.14
TRS20YBR254C RGR1P19263 1082 aa7.89□□□□□ -1.15
TRS20YBR254C DSF2P38213 736 aa7.89□□□□□ -1.15
TRS20YBR254C GYP1Q08484 637 aa7.88□□□□□ -1.15
TRS20YBR254C MAM3Q12296 706 aa7.88□□□□□ -1.15
TRS20YBR254C STR2P47164 639 aa7.87□□□□□ -1.15
TRS20YBR254C YPR109WQ06104 294 aa7.87□□□□□ -1.15
TRS20YBR254C BUD20Q08004 166 aaPredicted RBP7.87□□□□□ -1.15
TRS20YBR254C NUD1P32336 851 aa7.86□□□□□ -1.15
TRS20YBR254C ISM1P48526 1002 aa7.86□□□□□ -1.15
TRS20YBR254C SPB4P25808 606 aaPredicted RBP7.85□□□□□ -1.15
TRS20YBR254C IES2P40154 320 aa7.85□□□□□ -1.15
TRS20YBR254C PSE1P32337 1089 aaKnown RBP7.82□□□□□ -1.16
TRS20YBR254C NUP42P49686 430 aaKnown RBP7.81□□□□□ -1.16
TRS20YBR254C SAS4Q04003 481 aa7.81□□□□□ -1.16
TRS20YBR254C PRT1P06103 763 aaKnown RBP7.8□□□□□ -1.16
TRS20YBR254C SDH2P21801 266 aa7.8□□□□□ -1.16
TRS20YBR254C RAS1P01119 309 aa7.79□□□□□ -1.16
TRS20YBR254C NPL4P33755 580 aa7.79□□□□□ -1.16
TRS20YBR254C RQC2Q12532 1038 aaKnown RBP7.79□□□□□ -1.16
TRS20YBR254C SEC2P17065 759 aa7.77□□□□□ -1.17
TRS20YBR254C DIT2P21595 489 aa7.77□□□□□ -1.17
TRS20YBR254C GCD11P32481 527 aaKnown RBP7.77□□□□□ -1.17
TRS20YBR254C TY1A-DR4O74302 440 aa7.76□□□□□ -1.17
TRS20YBR254C TY1A-HP0C2I4 478 aaKnown RBP7.76□□□□□ -1.17
TRS20YBR254C TY1A-AP0CX57 440 aa7.76□□□□□ -1.17
TRS20YBR254C TY1A-PR1P0CX58 440 aa7.76□□□□□ -1.17
TRS20YBR254C TY1A-ORP0CX59 440 aa7.76□□□□□ -1.17
TRS20YBR254C TY1A-PR2P0CX60 440 aa7.76□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 29.8 ms