RNA–Protein interactions for RNA: ENST00000641828.1

CASC19-260, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 2,001 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-260ENST00000641828 PLEKHG5O94827 1062 aa9.92□□□□□ -0.82
CASC19-260ENST00000641828 CHGAP10645 457 aaKnown RBP9.92□□□□□ -0.82
CASC19-260ENST00000641828 PELP1Q8IZL8 1130 aaKnown RBP9.92□□□□□ -0.82
CASC19-260ENST00000641828 ZBTB47Q9UFB7 747 aaPredicted RBP9.92□□□□□ -0.82
CASC19-260ENST00000641828 BICRAQ9NZM4 1560 aa9.9□□□□□ -0.82
CASC19-260ENST00000641828 TRIM41Q8WV44 630 aa9.86□□□□□ -0.83
CASC19-260ENST00000641828 HRCP23327 699 aa9.82□□□□□ -0.84
CASC19-260ENST00000641828 HS6ST3Q8IZP7 471 aa9.82□□□□□ -0.84
CASC19-260ENST00000641828 CUX2O14529 1486 aa9.77□□□□□ -0.84
CASC19-260ENST00000641828 GSE1Q14687 1217 aa9.77□□□□□ -0.85
CASC19-260ENST00000641828 RNF25Q96BH1 459 aaPredicted RBP9.77□□□□□ -0.85
CASC19-260ENST00000641828 NBR1Q14596 966 aa9.75□□□□□ -0.85
CASC19-260ENST00000641828 EIF4G1Q04637 1599 aaKnown RBP9.74□□□□□ -0.85
CASC19-260ENST00000641828 NUBP1P53384 320 aa9.71□□□□□ -0.86
CASC19-260ENST00000641828 SHROOM4Q9ULL8 1493 aa9.69□□□□□ -0.86
CASC19-260ENST00000641828 RIOK3O14730 519 aaKnown RBP9.68□□□□□ -0.86
CASC19-260ENST00000641828 NKX1-1Q15270 411 aaPredicted RBP9.68□□□□□ -0.86
CASC19-260ENST00000641828 DCAF8Q5TAQ9 597 aa9.67□□□□□ -0.86
CASC19-260ENST00000641828 MYT1Q01538 1121 aa9.66□□□□□ -0.86
CASC19-260ENST00000641828 GTPBP6O43824 516 aaPredicted RBP9.65□□□□□ -0.87
CASC19-260ENST00000641828 STK25O00506 426 aa9.62□□□□□ -0.87
CASC19-260ENST00000641828 FAM212AQ96EL1 285 aa9.61□□□□□ -0.87
CASC19-260ENST00000641828 ERCC6Q03468 1493 aa9.61□□□□□ -0.87
CASC19-260ENST00000641828 VGFO15240 615 aaPredicted RBP9.61□□□□□ -0.87
CASC19-260ENST00000641828 SPDYE1Q8NFV5 336 aaPredicted RBP9.6□□□□□ -0.87
CASC19-260ENST00000641828 CREBZFQ9NS37 354 aa9.57□□□□□ -0.88
CASC19-260ENST00000641828 CHRM1P11229 460 aaPredicted RBP9.56□□□□□ -0.88
CASC19-260ENST00000641828 MNX1P50219 401 aaPredicted RBP9.56□□□□□ -0.88
CASC19-260ENST00000641828 MYO15BQ96JP2 1530 aa9.55□□□□□ -0.88
CASC19-260ENST00000641828 CLEC11AQ9Y240 323 aa9.55□□□□□ -0.88
CASC19-260ENST00000641828 PRR29P0C7W0 189 aa9.54□□□□□ -0.88
CASC19-260ENST00000641828 CACNB1Q02641 598 aaPredicted RBP9.54□□□□□ -0.88
CASC19-260ENST00000641828 SGIP1Q9BQI5 828 aa9.54□□□□□ -0.88
CASC19-260ENST00000641828 STK24Q9Y6E0 443 aa9.53□□□□□ -0.88
CASC19-260ENST00000641828 RASEFQ8IZ41 740 aa9.53□□□□□ -0.88
CASC19-260ENST00000641828 AKT1S1Q96B36 256 aa9.53□□□□□ -0.88
CASC19-260ENST00000641828 BCL11BQ9C0K0 894 aaPredicted RBP9.53□□□□□ -0.88
CASC19-260ENST00000641828 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.52□□□□□ -0.89
CASC19-260ENST00000641828 ZFP91Q96JP5 570 aaPredicted RBP9.52□□□□□ -0.89
CASC19-260ENST00000641828 RYDENQ9NUL5 291 aaKnown RBP9.52□□□□□ -0.89
CASC19-260ENST00000641828 RBM42Q9BTD8 480 aaKnown RBP9.5□□□□□ -0.89
CASC19-260ENST00000641828 PYGBP11216 843 aa9.47□□□□□ -0.89
CASC19-260ENST00000641828 PPARGC1BQ86YN6 1023 aaKnown RBP9.46□□□□□ -0.89
CASC19-260ENST00000641828 PCGF6Q9BYE7 350 aa9.45□□□□□ -0.9
CASC19-260ENST00000641828 SCRIBQ14160 1630 aa9.45□□□□□ -0.9
CASC19-260ENST00000641828 REM2Q8IYK8 340 aaPredicted RBP9.44□□□□□ -0.9
CASC19-260ENST00000641828 P3H3Q8IVL6 736 aa9.43□□□□□ -0.9
CASC19-260ENST00000641828 TIMELESSQ9UNS1 1208 aa9.4□□□□□ -0.9
CASC19-260ENST00000641828 GTF3C3Q9Y5Q9 886 aa9.39□□□□□ -0.91
CASC19-260ENST00000641828 TULP1O00294 542 aaPredicted RBP9.38□□□□□ -0.91
CASC19-260ENST00000641828 WDR70Q9NW82 654 aa9.35□□□□□ -0.91
CASC19-260ENST00000641828 ZNF467Q7Z7K2 595 aaPredicted RBP9.34□□□□□ -0.91
CASC19-260ENST00000641828 CADPS2Q86UW7 1296 aa9.34□□□□□ -0.91
CASC19-260ENST00000641828 KCNV2Q8TDN2 545 aa9.34□□□□□ -0.91
CASC19-260ENST00000641828 PITPNM1O00562 1244 aa9.34□□□□□ -0.91
CASC19-260ENST00000641828 TMEM132AQ24JP5 1023 aa9.32□□□□□ -0.92
CASC19-260ENST00000641828 THOC2Q8NI27 1593 aaKnown RBP9.32□□□□□ -0.92
CASC19-260ENST00000641828 PDAP1Q13442 181 aaKnown RBP9.31□□□□□ -0.92
CASC19-260ENST00000641828 TSPYL2Q9H2G4 693 aaPredicted RBP9.31□□□□□ -0.92
CASC19-260ENST00000641828 LMOD2Q6P5Q4 547 aa9.3□□□□□ -0.92
CASC19-260ENST00000641828 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.29□□□□□ -0.92
CASC19-260ENST00000641828 NESP48681 1621 aa9.28□□□□□ -0.92
CASC19-260ENST00000641828 POTEHQ6S545 545 aa9.28□□□□□ -0.92
CASC19-260ENST00000641828 DCAF1Q9Y4B6 1507 aa9.28□□□□□ -0.92
CASC19-260ENST00000641828 ZEB1P37275 1124 aaPredicted RBP9.27□□□□□ -0.93
CASC19-260ENST00000641828 ERICH6Q7L0X2 663 aa9.27□□□□□ -0.93
CASC19-260ENST00000641828 PCDHB8Q9UN66 801 aa9.26□□□□□ -0.93
CASC19-260ENST00000641828 PCDHB13Q9Y5F0 798 aa9.26□□□□□ -0.93
CASC19-260ENST00000641828 CHADLQ6NUI6 762 aa9.26□□□□□ -0.93
CASC19-260ENST00000641828 MFRPQ9BY79 579 aa9.26□□□□□ -0.93
CASC19-260ENST00000641828 SMARCA2P51531 1590 aa9.24□□□□□ -0.93
CASC19-260ENST00000641828 BAZ1AQ9NRL2 1556 aaPredicted RBP9.24□□□□□ -0.93
CASC19-260ENST00000641828 PSEN1P49768 467 aa9.23□□□□□ -0.93
CASC19-260ENST00000641828 SUPT5HO00267 1087 aaKnown RBP9.22□□□□□ -0.93
CASC19-260ENST00000641828 FARP1Q9Y4F1 1045 aaPredicted RBP9.22□□□□□ -0.93
CASC19-260ENST00000641828 ZNF579Q8NAF0 562 aaKnown RBP9.21□□□□□ -0.93
CASC19-260ENST00000641828 TRIM26Q12899 539 aaPredicted RBP9.2□□□□□ -0.94
CASC19-260ENST00000641828 ARHGEF1Q92888 912 aaKnown RBP9.2□□□□□ -0.94
CASC19-260ENST00000641828 CCDC61Q9Y6R9 512 aa9.2□□□□□ -0.94
CASC19-260ENST00000641828 RIMBP3CA6NJZ7 1639 aa9.2□□□□□ -0.94
CASC19-260ENST00000641828 RIMBP3BA6NNM3 1639 aa9.2□□□□□ -0.94
CASC19-260ENST00000641828 RIMBP3Q9UFD9 1639 aa9.2□□□□□ -0.94
CASC19-260ENST00000641828 KIF21AQ7Z4S6 1674 aa9.18□□□□□ -0.94
CASC19-260ENST00000641828 NCAPD3P42695 1498 aa9.18□□□□□ -0.94
CASC19-260ENST00000641828 PPP1R37O75864 691 aa9.17□□□□□ -0.94
CASC19-260ENST00000641828 E2F4Q16254 413 aa9.17□□□□□ -0.94
CASC19-260ENST00000641828 BRPF1P55201 1214 aaPredicted RBP9.15□□□□□ -0.94
CASC19-260ENST00000641828 ILDR1Q86SU0 546 aaPredicted RBP9.15□□□□□ -0.94
CASC19-260ENST00000641828 FBXO22Q8NEZ5 403 aa9.15□□□□□ -0.94
CASC19-260ENST00000641828 ZC3H15Q8WU90 426 aaKnown RBP9.15□□□□□ -0.94
CASC19-260ENST00000641828 ZCCHC6Q5VYS8 1495 aaKnown RBP9.14□□□□□ -0.95
CASC19-260ENST00000641828 TTBK1Q5TCY1 1321 aaPredicted RBP9.14□□□□□ -0.95
CASC19-260ENST00000641828 NLRP6P59044 892 aa9.14□□□□□ -0.95
CASC19-260ENST00000641828 EFCAB3Q8N7B9 438 aa9.14□□□□□ -0.95
CASC19-260ENST00000641828 C14orf37Q86TY3 774 aa9.13□□□□□ -0.95
CASC19-260ENST00000641828 IFNL1Q8IU54 200 aa9.13□□□□□ -0.95
CASC19-260ENST00000641828 SEMA3EO15041 775 aa9.12□□□□□ -0.95
CASC19-260ENST00000641828 SOX12O15370 315 aa9.12□□□□□ -0.95
CASC19-260ENST00000641828 CABP2Q9NPB3 220 aa9.12□□□□□ -0.95
CASC19-260ENST00000641828 ACIN1Q9UKV3 1341 aaKnown RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 133.8 ms