RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 JPH4Q96JJ6 628 aa17.85■□□□□ 0.45
PHGDH-222ENST00000641587 ADCY10Q96PN6 1610 aa17.78■□□□□ 0.44
PHGDH-222ENST00000641587 ABCC10Q5T3U5 1492 aa17.75■□□□□ 0.43
PHGDH-222ENST00000641587 DIP2BQ9P265 1576 aa17.75■□□□□ 0.43
PHGDH-222ENST00000641587 FAM69CQ0P6D2 419 aa17.75■□□□□ 0.43
PHGDH-222ENST00000641587 MAPKBP1O60336 1514 aa17.74■□□□□ 0.43
PHGDH-222ENST00000641587 IGF1RP08069 1367 aa17.7■□□□□ 0.42
PHGDH-222ENST00000641587 KIAA0586Q9BVV6 1533 aa17.7■□□□□ 0.42
PHGDH-222ENST00000641587 NPM1P06748 294 aaKnown RBP eCLIP17.69■□□□□ 0.42
PHGDH-222ENST00000641587 CUL7Q14999 1698 aa17.68■□□□□ 0.42
PHGDH-222ENST00000641587 TSPOAP1O95153 1857 aa17.67■□□□□ 0.42
PHGDH-222ENST00000641587 KIF27Q86VH2 1401 aa17.66■□□□□ 0.42
PHGDH-222ENST00000641587 KDM6BO15054 1643 aa17.64■□□□□ 0.41
PHGDH-222ENST00000641587 TTBK1Q5TCY1 1321 aaPredicted RBP17.62■□□□□ 0.41
PHGDH-222ENST00000641587 PTPRGP23470 1445 aa17.58■□□□□ 0.41
PHGDH-222ENST00000641587 CARMIL1Q5VZK9 1371 aa17.57■□□□□ 0.4
PHGDH-222ENST00000641587 KDM4FA0A1W2PPD8 638 aa17.56■□□□□ 0.4
PHGDH-222ENST00000641587 IQGAP2Q13576 1575 aa17.53■□□□□ 0.4
PHGDH-222ENST00000641587 ABCC2Q92887 1545 aa17.53■□□□□ 0.4
PHGDH-222ENST00000641587 TNIKQ9UKE5 1360 aa17.53■□□□□ 0.4
PHGDH-222ENST00000641587 PPRC1Q5VV67 1664 aaKnown RBP17.52■□□□□ 0.39
PHGDH-222ENST00000641587 CARMIL2Q6F5E8 1435 aa17.51■□□□□ 0.39
PHGDH-222ENST00000641587 ASXL2Q76L83 1435 aa17.5■□□□□ 0.39
PHGDH-222ENST00000641587 DISP1Q96F81 1524 aa17.48■□□□□ 0.39
PHGDH-222ENST00000641587 GLI2P10070 1586 aa17.45■□□□□ 0.38
PHGDH-222ENST00000641587 UHRF1BP1LA0JNW5 1464 aa17.45■□□□□ 0.38
PHGDH-222ENST00000641587 PLB1Q6P1J6 1458 aa17.45■□□□□ 0.38
PHGDH-222ENST00000641587 UACAQ9BZF9 1416 aa17.44■□□□□ 0.38
PHGDH-222ENST00000641587 COL17A1Q9UMD9 1497 aaPredicted RBP17.41■□□□□ 0.38
PHGDH-222ENST00000641587 UGGT2Q9NYU1 1516 aa17.41■□□□□ 0.38
PHGDH-222ENST00000641587 KIAA0556O60303 1618 aa17.4■□□□□ 0.38
PHGDH-222ENST00000641587 ZCCHC11Q5TAX3 1644 aaKnown RBP17.4■□□□□ 0.38
PHGDH-222ENST00000641587 EPRSP07814 1512 aaKnown RBP17.4■□□□□ 0.38
PHGDH-222ENST00000641587 KDM5BQ9UGL1 1544 aa17.4■□□□□ 0.38
PHGDH-222ENST00000641587 RAPGEF2Q9Y4G8 1499 aa17.39■□□□□ 0.37
PHGDH-222ENST00000641587 MAP3K4Q9Y6R4 1608 aa17.39■□□□□ 0.37
PHGDH-222ENST00000641587 ADGRL1O94910 1474 aa17.37■□□□□ 0.37
PHGDH-222ENST00000641587 CTTNBP2Q8WZ74 1663 aa17.3■□□□□ 0.36
PHGDH-222ENST00000641587 TEX14Q8IWB6 1497 aa17.3■□□□□ 0.36
PHGDH-222ENST00000641587 WDR7Q9Y4E6 1490 aa17.3■□□□□ 0.36
PHGDH-222ENST00000641587 ABCA8O94911 1581 aa17.24■□□□□ 0.35
PHGDH-222ENST00000641587 ILDR1Q86SU0 546 aaPredicted RBP17.24■□□□□ 0.35
PHGDH-222ENST00000641587 HECW2Q9P2P5 1572 aa17.22■□□□□ 0.35
PHGDH-222ENST00000641587 CFAP43Q8NDM7 1665 aa17.2■□□□□ 0.34
PHGDH-222ENST00000641587 CD109Q6YHK3 1445 aa17.2■□□□□ 0.34
PHGDH-222ENST00000641587 GOLGA3Q08378 1498 aa17.19■□□□□ 0.34
PHGDH-222ENST00000641587 KCNH8Q96L42 1107 aa17.19■□□□□ 0.34
PHGDH-222ENST00000641587 MAGI3Q5TCQ9 1506 aa17.18■□□□□ 0.34
PHGDH-222ENST00000641587 PRXQ9BXM0 1461 aa17.18■□□□□ 0.34
PHGDH-222ENST00000641587 ARID3CA6NKF2 412 aa17.16■□□□□ 0.34
PHGDH-222ENST00000641587 KIF21BO75037 1637 aa17.15■□□□□ 0.34
PHGDH-222ENST00000641587 P3H3Q8IVL6 736 aa17.12■□□□□ 0.33
PHGDH-222ENST00000641587 ATP10BO94823 1461 aa17.09■□□□□ 0.33
PHGDH-222ENST00000641587 ABCA9Q8IUA7 1624 aa17.05■□□□□ 0.32
PHGDH-222ENST00000641587 ARAP3Q8WWN8 1544 aa17.05■□□□□ 0.32
PHGDH-222ENST00000641587 SAMD9Q5K651 1589 aa17.04■□□□□ 0.32
PHGDH-222ENST00000641587 RAPGEF6Q8TEU7 1601 aa17.02■□□□□ 0.31
PHGDH-222ENST00000641587 RAPGEF3O95398 923 aa16.99■□□□□ 0.31
PHGDH-222ENST00000641587 FRMPD1Q5SYB0 1578 aa16.98■□□□□ 0.31
PHGDH-222ENST00000641587 ADAMTSL3P82987 1691 aa16.98■□□□□ 0.31
PHGDH-222ENST00000641587 RANGAP1P46060 587 aaPredicted RBP16.96■□□□□ 0.31
PHGDH-222ENST00000641587 NUP153P49790 1475 aaKnown RBP16.96■□□□□ 0.31
PHGDH-222ENST00000641587 PTPRMP28827 1452 aa16.95■□□□□ 0.3
PHGDH-222ENST00000641587 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.95■□□□□ 0.3
PHGDH-222ENST00000641587 HNRNPUL2Q1KMD3 747 aaKnown RBP16.95■□□□□ 0.3
PHGDH-222ENST00000641587 CSRNP3Q8WYN3 585 aa16.95■□□□□ 0.3
PHGDH-222ENST00000641587 FHOD3Q2V2M9 1422 aa16.95■□□□□ 0.3
PHGDH-222ENST00000641587 NEO1Q92859 1461 aa16.94■□□□□ 0.3
PHGDH-222ENST00000641587 FAM9AQ8IZU1 332 aaPredicted RBP16.93■□□□□ 0.3
PHGDH-222ENST00000641587 BCORL1Q5H9F3 1711 aa16.93■□□□□ 0.3
PHGDH-222ENST00000641587 MADDQ8WXG6 1647 aa16.92■□□□□ 0.3
PHGDH-222ENST00000641587 PHLDB1Q86UU1 1377 aa16.92■□□□□ 0.3
PHGDH-222ENST00000641587 RICTORQ6R327 1708 aa16.88■□□□□ 0.29
PHGDH-222ENST00000641587 ARHGEF40Q8TER5 1519 aa16.88■□□□□ 0.29
PHGDH-222ENST00000641587 ARID4BQ4LE39 1312 aaPredicted RBP16.87■□□□□ 0.29
PHGDH-222ENST00000641587 RIMS1Q86UR5 1692 aaKnown RBP16.86■□□□□ 0.29
PHGDH-222ENST00000641587 TTC37Q6PGP7 1564 aa16.85■□□□□ 0.29
PHGDH-222ENST00000641587 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.85■□□□□ 0.296e-6■■■■■ 38.2
PHGDH-222ENST00000641587 PCF11O94913 1555 aaKnown RBP16.85■□□□□ 0.29
PHGDH-222ENST00000641587 DENND4BO75064 1496 aaPredicted RBP16.84■□□□□ 0.29
PHGDH-222ENST00000641587 SIGLEC1Q9BZZ2 1709 aa16.84■□□□□ 0.29
PHGDH-222ENST00000641587 FANCAO15360 1455 aa16.83■□□□□ 0.28
PHGDH-222ENST00000641587 AKNAQ7Z591 1439 aa16.83■□□□□ 0.28
PHGDH-222ENST00000641587 LMTK3Q96Q04 1460 aa16.83■□□□□ 0.28
PHGDH-222ENST00000641587 CDK13Q14004 1512 aaKnown RBP16.81■□□□□ 0.28
PHGDH-222ENST00000641587 EEA1Q15075 1411 aa16.81■□□□□ 0.28
PHGDH-222ENST00000641587 PLEKHD1A6NEE1 506 aa16.81■□□□□ 0.28
PHGDH-222ENST00000641587 CFAP74Q9C0B2 1584 aa16.81■□□□□ 0.28
PHGDH-222ENST00000641587 FBXO41Q8TF61 875 aa16.8■□□□□ 0.28
PHGDH-222ENST00000641587 YEATS2Q9ULM3 1422 aa16.79■□□□□ 0.28
PHGDH-222ENST00000641587 PLPPR3Q6T4P5 718 aa16.79■□□□□ 0.28
PHGDH-222ENST00000641587 EFCAB5A4FU69 1503 aa16.78■□□□□ 0.28
PHGDH-222ENST00000641587 ZMYM4Q5VZL5 1548 aa16.78■□□□□ 0.28
PHGDH-222ENST00000641587 ZFYVE16Q7Z3T8 1539 aa16.76■□□□□ 0.27
PHGDH-222ENST00000641587 HECW1Q76N89 1606 aa16.75■□□□□ 0.27
PHGDH-222ENST00000641587 HSPA2P54652 639 aa16.75■□□□□ 0.27
PHGDH-222ENST00000641587 EHMT2Q96KQ7 1210 aa16.74■□□□□ 0.27
PHGDH-222ENST00000641587 MLECQ14165 292 aa16.72■□□□□ 0.27
PHGDH-222ENST00000641587 FER1L4A9Z1Z3 1794 aa16.72■□□□□ 0.27
PHGDH-222ENST00000641587 POGZQ7Z3K3 1410 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms