RNA–Protein interactions for RNA: ENST00000640483.1

CACNA1D-230, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

APPRIS ALT2 TSL 5

Gene CACNA1D, Length 5,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-230ENST00000640483 DCAF8L1A6NGE4 600 aa12.77□□□□□ -0.37
CACNA1D-230ENST00000640483 ZBTB7CA1YPR0 619 aa12.76□□□□□ -0.37
CACNA1D-230ENST00000640483 KIF27Q86VH2 1401 aa12.74□□□□□ -0.37
CACNA1D-230ENST00000640483 WRNQ14191 1432 aaPredicted RBP eCLIP12.73□□□□□ -0.37
CACNA1D-230ENST00000640483 CADPSQ9ULU8 1353 aa12.71□□□□□ -0.37
CACNA1D-230ENST00000640483 NPHP1O15259 732 aa12.7□□□□□ -0.38
CACNA1D-230ENST00000640483 CLIP1P30622 1438 aa12.7□□□□□ -0.38
CACNA1D-230ENST00000640483 EEA1Q15075 1411 aa12.7□□□□□ -0.38
CACNA1D-230ENST00000640483 PLEKHG5O94827 1062 aa12.69□□□□□ -0.38
CACNA1D-230ENST00000640483 KDM2AQ9Y2K7 1162 aa12.69□□□□□ -0.38
CACNA1D-230ENST00000640483 CFDP1Q9UEE9 299 aaPredicted RBP12.68□□□□□ -0.38
CACNA1D-230ENST00000640483 HMGXB3Q12766 1538 aa12.68□□□□□ -0.38
CACNA1D-230ENST00000640483 CC2D2AQ9P2K1 1620 aa12.68□□□□□ -0.38
CACNA1D-230ENST00000640483 ACIN1Q9UKV3 1341 aaKnown RBP12.68□□□□□ -0.38
CACNA1D-230ENST00000640483 SENP3Q9H4L4 574 aaPredicted RBP12.66□□□□□ -0.38
CACNA1D-230ENST00000640483 WIZO95785 1651 aa12.65□□□□□ -0.38
CACNA1D-230ENST00000640483 GOLGA3Q08378 1498 aa12.65□□□□□ -0.38
CACNA1D-230ENST00000640483 UNC13AQ9UPW8 1703 aa12.65□□□□□ -0.38
CACNA1D-230ENST00000640483 CCDC88BA6NC98 1476 aa12.65□□□□□ -0.38
CACNA1D-230ENST00000640483 RRP7BPQ9NSQ0 103 aa12.63□□□□□ -0.39
CACNA1D-230ENST00000640483 ABCC8Q09428 1581 aa12.6□□□□□ -0.39
CACNA1D-230ENST00000640483 RTL5Q5HYW3 569 aaPredicted RBP12.6□□□□□ -0.39
CACNA1D-230ENST00000640483 FOXD1Q16676 465 aa12.59□□□□□ -0.39
CACNA1D-230ENST00000640483 WDR43Q15061 677 aaKnown RBP eCLIP12.58□□□□□ -0.39
CACNA1D-230ENST00000640483 CEP164Q9UPV0 1460 aa12.58□□□□□ -0.4
CACNA1D-230ENST00000640483 HDGFP51858 240 aaKnown RBP12.57□□□□□ -0.4
CACNA1D-230ENST00000640483 ARXQ96QS3 562 aa12.56□□□□□ -0.4
CACNA1D-230ENST00000640483 CARMIL2Q6F5E8 1435 aa12.55□□□□□ -0.4
CACNA1D-230ENST00000640483 MLECQ14165 292 aa12.55□□□□□ -0.4
CACNA1D-230ENST00000640483 CUX2O14529 1486 aa12.55□□□□□ -0.4
CACNA1D-230ENST00000640483 TMC1Q8TDI8 760 aa12.55□□□□□ -0.4
CACNA1D-230ENST00000640483 KANK1Q14678 1352 aa12.54□□□□□ -0.4
CACNA1D-230ENST00000640483 CDK11BP21127 795 aaKnown RBP12.54□□□□□ -0.4
CACNA1D-230ENST00000640483 LMOD2Q6P5Q4 547 aa12.54□□□□□ -0.4
CACNA1D-230ENST00000640483 RGL3Q3MIN7 710 aa12.53□□□□□ -0.4
CACNA1D-230ENST00000640483 CCNB3Q8WWL7 1395 aa12.53□□□□□ -0.4
CACNA1D-230ENST00000640483 CARMIL1Q5VZK9 1371 aa12.52□□□□□ -0.41
CACNA1D-230ENST00000640483 POGKQ9P215 609 aa12.51□□□□□ -0.41
CACNA1D-230ENST00000640483 CDCA8Q53HL2 280 aa12.51□□□□□ -0.41
CACNA1D-230ENST00000640483 PHF23Q9BUL5 403 aaPredicted RBP12.51□□□□□ -0.41
CACNA1D-230ENST00000640483 FANCD2Q9BXW9 1451 aa12.5□□□□□ -0.41
CACNA1D-230ENST00000640483 PEG3Q9GZU2 1588 aa12.49□□□□□ -0.41
CACNA1D-230ENST00000640483 SOGA1O94964 1423 aa12.48□□□□□ -0.41
CACNA1D-230ENST00000640483 CEP162Q5TB80 1403 aa12.48□□□□□ -0.41
CACNA1D-230ENST00000640483 FHAD1B1AJZ9 1412 aa12.47□□□□□ -0.41
CACNA1D-230ENST00000640483 FAM9BQ8IZU0 186 aa12.47□□□□□ -0.41
CACNA1D-230ENST00000640483 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.47□□□□□ -0.41
CACNA1D-230ENST00000640483 TMX4Q9H1E5 349 aaPredicted RBP12.46□□□□□ -0.41
CACNA1D-230ENST00000640483 CFAP53Q96M91 514 aa12.46□□□□□ -0.42
CACNA1D-230ENST00000640483 EIF4G2P78344 907 aaKnown RBP eCLIP12.45□□□□□ -0.42
CACNA1D-230ENST00000640483 SALL2Q9Y467 1007 aaPredicted RBP12.45□□□□□ -0.42
CACNA1D-230ENST00000640483 DDX10Q13206 875 aaKnown RBP12.44□□□□□ -0.42
CACNA1D-230ENST00000640483 CCDC9Q9Y3X0 531 aaKnown RBP12.44□□□□□ -0.42
CACNA1D-230ENST00000640483 CFTRP13569 1480 aa12.43□□□□□ -0.42
CACNA1D-230ENST00000640483 MYH16Q9H6N6 1097 aa12.42□□□□□ -0.42
CACNA1D-230ENST00000640483 TNIKQ9UKE5 1360 aa12.42□□□□□ -0.42
CACNA1D-230ENST00000640483 LAMC3Q9Y6N6 1575 aa12.42□□□□□ -0.42
CACNA1D-230ENST00000640483 DNAJC5BQ9UF47 199 aa12.41□□□□□ -0.42
CACNA1D-230ENST00000640483 HNRNPUQ00839 825 aaKnown RBP eCLIP12.41□□□□□ -0.42
CACNA1D-230ENST00000640483 TDRD9Q8NDG6 1382 aaKnown RBP12.41□□□□□ -0.42
CACNA1D-230ENST00000640483 PPM1GO15355 546 aaPredicted RBP12.4□□□□□ -0.42
CACNA1D-230ENST00000640483 GGT6Q6P531 493 aa12.4□□□□□ -0.42
CACNA1D-230ENST00000640483 MEX3CQ5U5Q3 659 aaKnown RBP12.4□□□□□ -0.43
CACNA1D-230ENST00000640483 UPF2Q9HAU5 1272 aaKnown RBP12.39□□□□□ -0.43
CACNA1D-230ENST00000640483 KNSTRNQ9Y448 316 aa12.39□□□□□ -0.43
CACNA1D-230ENST00000640483 EFCAB2Q5VUJ9 269 aa12.38□□□□□ -0.43
CACNA1D-230ENST00000640483 HSP90AA1P07900 732 aaKnown RBP12.38□□□□□ -0.43
CACNA1D-230ENST00000640483 CARD11Q9BXL7 1154 aa12.38□□□□□ -0.43
CACNA1D-230ENST00000640483 GTF3C3Q9Y5Q9 886 aa12.38□□□□□ -0.43
CACNA1D-230ENST00000640483 MRS2Q9HD23 443 aa12.37□□□□□ -0.43
CACNA1D-230ENST00000640483 MRC2Q9UBG0 1479 aa12.37□□□□□ -0.43
CACNA1D-230ENST00000640483 GOLGA2Q08379 1002 aa12.36□□□□□ -0.43
CACNA1D-230ENST00000640483 OSCARQ8IYS5 282 aa12.35□□□□□ -0.43
CACNA1D-230ENST00000640483 NUDCQ9Y266 331 aa12.34□□□□□ -0.43
CACNA1D-230ENST00000640483 ANP32AP39687 249 aaKnown RBP12.33□□□□□ -0.44
CACNA1D-230ENST00000640483 MAPK8IP3Q9UPT6 1336 aa12.32□□□□□ -0.44
CACNA1D-230ENST00000640483 KRI1Q8N9T8 703 aaKnown RBP12.31□□□□□ -0.44
CACNA1D-230ENST00000640483 EID1Q9Y6B2 187 aa12.3□□□□□ -0.44
CACNA1D-230ENST00000640483 CYB5RLQ6IPT4 315 aa12.29□□□□□ -0.44
CACNA1D-230ENST00000640483 SRPK2P78362 688 aaKnown RBP12.29□□□□□ -0.44
CACNA1D-230ENST00000640483 FMN1Q68DA7 1419 aa12.28□□□□□ -0.44
CACNA1D-230ENST00000640483 PNNQ9H307 717 aaKnown RBP12.27□□□□□ -0.45
CACNA1D-230ENST00000640483 TULP1O00294 542 aaPredicted RBP12.27□□□□□ -0.45
CACNA1D-230ENST00000640483 HIRIP3Q9BW71 556 aaPredicted RBP12.27□□□□□ -0.45
CACNA1D-230ENST00000640483 ARHGAP35Q9NRY4 1499 aa12.26□□□□□ -0.45
CACNA1D-230ENST00000640483 JPH4Q96JJ6 628 aa12.26□□□□□ -0.45
CACNA1D-230ENST00000640483 NESP48681 1621 aa12.26□□□□□ -0.45
CACNA1D-230ENST00000640483 IFT140Q96RY7 1462 aa12.26□□□□□ -0.45
CACNA1D-230ENST00000640483 DCAF11Q8TEB1 546 aa12.25□□□□□ -0.45
CACNA1D-230ENST00000640483 TMF1P82094 1093 aa12.24□□□□□ -0.45
CACNA1D-230ENST00000640483 LAS1LQ9Y4W2 734 aaKnown RBP12.24□□□□□ -0.45
CACNA1D-230ENST00000640483 STK26Q9P289 416 aa12.23□□□□□ -0.45
CACNA1D-230ENST00000640483 FGD5Q6ZNL6 1462 aa12.23□□□□□ -0.45
CACNA1D-230ENST00000640483 SAFB2Q14151 953 aaKnown RBP eCLIP12.23□□□□□ -0.45
CACNA1D-230ENST00000640483 SOX12O15370 315 aa12.22□□□□□ -0.45
CACNA1D-230ENST00000640483 PAK3O75914 559 aaPredicted RBP12.22□□□□□ -0.45
CACNA1D-230ENST00000640483 SPAG9O60271 1321 aaKnown RBP12.22□□□□□ -0.45
CACNA1D-230ENST00000640483 KIF3BO15066 747 aa12.22□□□□□ -0.45
CACNA1D-230ENST00000640483 HDGFL2Q7Z4V5 671 aaPredicted RBP12.22□□□□□ -0.45
CACNA1D-230ENST00000640483 TNNT2P45379 298 aaPredicted RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms