RNA–Protein interactions for RNA: ENST00000640218.1

HNRNPU-226, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HNRNPU, Length 6,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-226ENST00000640218 CHMP7Q8WUX9 453 aaPredicted RBP19.68■□□□□ 0.74
HNRNPU-226ENST00000640218 ARXQ96QS3 562 aa19.65■□□□□ 0.74
HNRNPU-226ENST00000640218 NBR1Q14596 966 aa19.63■□□□□ 0.73
HNRNPU-226ENST00000640218 IRX6P78412 446 aaPredicted RBP19.62■□□□□ 0.73
HNRNPU-226ENST00000640218 RRP7BPQ9NSQ0 103 aa19.61■□□□□ 0.73
HNRNPU-226ENST00000640218 ZCCHC6Q5VYS8 1495 aaKnown RBP19.6■□□□□ 0.73
HNRNPU-226ENST00000640218 KCNH8Q96L42 1107 aa19.59■□□□□ 0.73
HNRNPU-226ENST00000640218 EIF4G2P78344 907 aaKnown RBP eCLIP19.55■□□□□ 0.722e-12■■■■□ 22
HNRNPU-226ENST00000640218 MYH16Q9H6N6 1097 aa19.55■□□□□ 0.72
HNRNPU-226ENST00000640218 CLIP1P30622 1438 aa19.55■□□□□ 0.72
HNRNPU-226ENST00000640218 MIER1Q8N108 512 aa19.55■□□□□ 0.72
HNRNPU-226ENST00000640218 LMOD2Q6P5Q4 547 aa19.53■□□□□ 0.72
HNRNPU-226ENST00000640218 PPP1R15AO75807 674 aaPredicted RBP19.52■□□□□ 0.72
HNRNPU-226ENST00000640218 NPHP1O15259 732 aa19.5■□□□□ 0.71
HNRNPU-226ENST00000640218 RGL3Q3MIN7 710 aa19.49■□□□□ 0.71
HNRNPU-226ENST00000640218 PLEKHD1A6NEE1 506 aa19.44■□□□□ 0.7
HNRNPU-226ENST00000640218 TULP1O00294 542 aaPredicted RBP19.43■□□□□ 0.7
HNRNPU-226ENST00000640218 SENP3-EIF4A1A0A087X0R7 540 aa19.42■□□□□ 0.7
HNRNPU-226ENST00000640218 RSF1Q96T23 1441 aaPredicted RBP19.41■□□□□ 0.7
HNRNPU-226ENST00000640218 MLECQ14165 292 aa19.38■□□□□ 0.69
HNRNPU-226ENST00000640218 PPM1GO15355 546 aaPredicted RBP19.36■□□□□ 0.69
HNRNPU-226ENST00000640218 GOLGA3Q08378 1498 aa19.35■□□□□ 0.69
HNRNPU-226ENST00000640218 CFAP53Q96M91 514 aa19.34■□□□□ 0.69
HNRNPU-226ENST00000640218 CEP162Q5TB80 1403 aa19.33■□□□□ 0.69
HNRNPU-226ENST00000640218 BECN1Q14457 450 aa19.32■□□□□ 0.68
HNRNPU-226ENST00000640218 CFDP1Q9UEE9 299 aaPredicted RBP19.32■□□□□ 0.68
HNRNPU-226ENST00000640218 KNSTRNQ9Y448 316 aa19.32■□□□□ 0.68
HNRNPU-226ENST00000640218 CDK11BP21127 795 aaKnown RBP19.31■□□□□ 0.68
HNRNPU-226ENST00000640218 DDRGK1Q96HY6 314 aa19.3■□□□□ 0.68
HNRNPU-226ENST00000640218 NCLP19338 710 aaKnown RBP19.29■□□□□ 0.68
HNRNPU-226ENST00000640218 GLIPR1L2Q4G1C9 344 aa19.29■□□□□ 0.68
HNRNPU-226ENST00000640218 CARD11Q9BXL7 1154 aa19.29■□□□□ 0.68
HNRNPU-226ENST00000640218 ERCC6Q03468 1493 aa19.29■□□□□ 0.68
HNRNPU-226ENST00000640218 CCDC180Q9P1Z9 1646 aa19.29■□□□□ 0.68
HNRNPU-226ENST00000640218 CDCA8Q53HL2 280 aa19.28■□□□□ 0.68
HNRNPU-226ENST00000640218 RB1CC1Q8TDY2 1594 aa19.27■□□□□ 0.68
HNRNPU-226ENST00000640218 NEUROD2Q15784 382 aa19.26■□□□□ 0.67
HNRNPU-226ENST00000640218 LAS1LQ9Y4W2 734 aaKnown RBP19.26■□□□□ 0.67
HNRNPU-226ENST00000640218 EEA1Q15075 1411 aa19.25■□□□□ 0.67
HNRNPU-226ENST00000640218 FTSJ3Q8IY81 847 aaKnown RBP19.25■□□□□ 0.67
HNRNPU-226ENST00000640218 SUPT16HQ9Y5B9 1047 aaKnown RBP19.23■□□□□ 0.67
HNRNPU-226ENST00000640218 MYO15BQ96JP2 1530 aa19.22■□□□□ 0.67
HNRNPU-226ENST00000640218 WRNQ14191 1432 aaPredicted RBP eCLIP19.22■□□□□ 0.67
HNRNPU-226ENST00000640218 GOLGA6L22H0YM25 854 aa19.21■□□□□ 0.67
HNRNPU-226ENST00000640218 PHF23Q9BUL5 403 aaPredicted RBP19.2■□□□□ 0.66
HNRNPU-226ENST00000640218 NCBP3Q53F19 620 aaKnown RBP19.2■□□□□ 0.66
HNRNPU-226ENST00000640218 TRIM44Q96DX7 344 aaPredicted RBP19.2■□□□□ 0.66
HNRNPU-226ENST00000640218 TPRNQ4KMQ1 711 aa19.19■□□□□ 0.66
HNRNPU-226ENST00000640218 MAPK8IP3Q9UPT6 1336 aa19.19■□□□□ 0.66
HNRNPU-226ENST00000640218 KIF27Q86VH2 1401 aa19.19■□□□□ 0.66
HNRNPU-226ENST00000640218 CASC1Q6TDU7 716 aa19.19■□□□□ 0.66
HNRNPU-226ENST00000640218 POGKQ9P215 609 aa19.19■□□□□ 0.66
HNRNPU-226ENST00000640218 BAZ1BQ9UIG0 1483 aaKnown RBP19.18■□□□□ 0.66
HNRNPU-226ENST00000640218 TNNT2P45379 298 aaPredicted RBP19.18■□□□□ 0.66
HNRNPU-226ENST00000640218 CCDC9Q9Y3X0 531 aaKnown RBP19.17■□□□□ 0.66
HNRNPU-226ENST00000640218 SIN3AQ96ST3 1273 aa19.16■□□□□ 0.66
HNRNPU-226ENST00000640218 NUDCQ9Y266 331 aa19.14■□□□□ 0.66
HNRNPU-226ENST00000640218 CC2D1BQ5T0F9 858 aaKnown RBP19.14■□□□□ 0.65
HNRNPU-226ENST00000640218 ANP32EQ9BTT0 268 aa19.13■□□□□ 0.65
HNRNPU-226ENST00000640218 FRAT1Q92837 279 aaPredicted RBP19.13■□□□□ 0.65
HNRNPU-226ENST00000640218 ZRSR1Q15695 479 aaKnown RBP19.12■□□□□ 0.65
HNRNPU-226ENST00000640218 CEP164Q9UPV0 1460 aa19.11■□□□□ 0.65
HNRNPU-226ENST00000640218 TNIKQ9UKE5 1360 aa19.1■□□□□ 0.65
HNRNPU-226ENST00000640218 RGS3P49796 1198 aa19.09■□□□□ 0.65
HNRNPU-226ENST00000640218 U2SURPO15042 1029 aaKnown RBP19.09■□□□□ 0.65
HNRNPU-226ENST00000640218 PTMAP06454 111 aaKnown RBP19.09■□□□□ 0.65
HNRNPU-226ENST00000640218 TAOK2Q9UL54 1235 aa19.06■□□□□ 0.64
HNRNPU-226ENST00000640218 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.03■□□□□ 0.64
HNRNPU-226ENST00000640218 OS9Q13438 667 aaPredicted RBP19.03■□□□□ 0.64
HNRNPU-226ENST00000640218 CCNB3Q8WWL7 1395 aa19.03■□□□□ 0.64
HNRNPU-226ENST00000640218 DCAF11Q8TEB1 546 aa19.02■□□□□ 0.64
HNRNPU-226ENST00000640218 PPP4R2Q9NY27 417 aa19.01■□□□□ 0.63
HNRNPU-226ENST00000640218 DNTTIP2Q5QJE6 756 aaKnown RBP19■□□□□ 0.63
HNRNPU-226ENST00000640218 SOX12O15370 315 aa19■□□□□ 0.63
HNRNPU-226ENST00000640218 EIF4G1Q04637 1599 aaKnown RBP19■□□□□ 0.63
HNRNPU-226ENST00000640218 TMF1P82094 1093 aa18.99■□□□□ 0.63
HNRNPU-226ENST00000640218 PNNQ9H307 717 aaKnown RBP18.97■□□□□ 0.63
HNRNPU-226ENST00000640218 CHMP4BQ9H444 224 aaKnown RBP18.96■□□□□ 0.63
HNRNPU-226ENST00000640218 NACADO15069 1562 aa18.96■□□□□ 0.63
HNRNPU-226ENST00000640218 HSP90AB1P08238 724 aaKnown RBP18.96■□□□□ 0.63
HNRNPU-226ENST00000640218 FGD1P98174 961 aa18.96■□□□□ 0.63
HNRNPU-226ENST00000640218 MS4A1P11836 297 aa18.95■□□□□ 0.62
HNRNPU-226ENST00000640218 PLCB2Q00722 1185 aa18.95■□□□□ 0.62
HNRNPU-226ENST00000640218 KANK1Q14678 1352 aa18.95■□□□□ 0.62
HNRNPU-226ENST00000640218 KCNJ4P48050 445 aa18.94■□□□□ 0.62
HNRNPU-226ENST00000640218 SRPK2P78362 688 aaKnown RBP18.94■□□□□ 0.62
HNRNPU-226ENST00000640218 B4GALNT3Q6L9W6 998 aa18.94■□□□□ 0.62
HNRNPU-226ENST00000640218 NAP1L2Q9ULW6 460 aaPredicted RBP18.94■□□□□ 0.62
HNRNPU-226ENST00000640218 SAFB2Q14151 953 aaKnown RBP eCLIP18.93■□□□□ 0.62
HNRNPU-226ENST00000640218 FHAD1B1AJZ9 1412 aa18.92■□□□□ 0.62
HNRNPU-226ENST00000640218 GOLGA2Q08379 1002 aa18.9■□□□□ 0.62
HNRNPU-226ENST00000640218 MORC1Q86VD1 984 aa18.89■□□□□ 0.61
HNRNPU-226ENST00000640218 CARMIL1Q5VZK9 1371 aa18.88■□□□□ 0.61
HNRNPU-226ENST00000640218 NOP58Q9Y2X3 529 aaKnown RBP18.87■□□□□ 0.61
HNRNPU-226ENST00000640218 HDGFP51858 240 aaKnown RBP18.87■□□□□ 0.61
HNRNPU-226ENST00000640218 KLHL34Q8N239 644 aa18.87■□□□□ 0.61
HNRNPU-226ENST00000640218 CUX2O14529 1486 aa18.86■□□□□ 0.61
HNRNPU-226ENST00000640218 MEX3CQ5U5Q3 659 aaKnown RBP18.86■□□□□ 0.61
HNRNPU-226ENST00000640218 STK26Q9P289 416 aa18.85■□□□□ 0.61
HNRNPU-226ENST00000640218 ISY1Q9ULR0 285 aaKnown RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms