RNA–Protein interactions for RNA: ENST00000640135.1

SCN1B-208, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 4,846 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-208ENST00000640135 CUX2O14529 1486 aa14.91□□□□□ -0.02
SCN1B-208ENST00000640135 RRP7BPQ9NSQ0 103 aa14.91□□□□□ -0.02
SCN1B-208ENST00000640135 ATAD2BQ9ULI0 1458 aa14.9□□□□□ -0.02
SCN1B-208ENST00000640135 CARMIL2Q6F5E8 1435 aa14.9□□□□□ -0.02
SCN1B-208ENST00000640135 CDCA8Q53HL2 280 aa14.89□□□□□ -0.03
SCN1B-208ENST00000640135 C14orf37Q86TY3 774 aa14.88□□□□□ -0.03
SCN1B-208ENST00000640135 TMC1Q8TDI8 760 aa14.86□□□□□ -0.03
SCN1B-208ENST00000640135 CCNB3Q8WWL7 1395 aa14.86□□□□□ -0.03
SCN1B-208ENST00000640135 EIF4G2P78344 907 aaKnown RBP eCLIP14.86□□□□□ -0.03
SCN1B-208ENST00000640135 WDR43Q15061 677 aaKnown RBP eCLIP14.85□□□□□ -0.03
SCN1B-208ENST00000640135 CADPSQ9ULU8 1353 aa14.85□□□□□ -0.03
SCN1B-208ENST00000640135 HDGFP51858 240 aaKnown RBP14.85□□□□□ -0.03
SCN1B-208ENST00000640135 TRHP20396 242 aaPredicted RBP14.84□□□□□ -0.03
SCN1B-208ENST00000640135 NPM2Q86SE8 214 aaKnown RBP14.83□□□□□ -0.04
SCN1B-208ENST00000640135 SOGA1O94964 1423 aa14.83□□□□□ -0.04
SCN1B-208ENST00000640135 SMARCA4P51532 1647 aa14.83□□□□□ -0.04
SCN1B-208ENST00000640135 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.82□□□□□ -0.04
SCN1B-208ENST00000640135 SCAF1Q9H7N4 1312 aaKnown RBP14.81□□□□□ -0.04
SCN1B-208ENST00000640135 KANK1Q14678 1352 aa14.8□□□□□ -0.04
SCN1B-208ENST00000640135 TOP2AP11388 1531 aaKnown RBP14.8□□□□□ -0.04
SCN1B-208ENST00000640135 DDX10Q13206 875 aaKnown RBP14.8□□□□□ -0.04
SCN1B-208ENST00000640135 CCDC88BA6NC98 1476 aa14.79□□□□□ -0.04
SCN1B-208ENST00000640135 EIF4G1Q04637 1599 aaKnown RBP14.78□□□□□ -0.04
SCN1B-208ENST00000640135 RGL3Q3MIN7 710 aa14.76□□□□□ -0.05
SCN1B-208ENST00000640135 NCAPD3P42695 1498 aa14.75□□□□□ -0.05
SCN1B-208ENST00000640135 HAP1P54257 671 aaPredicted RBP14.75□□□□□ -0.05
SCN1B-208ENST00000640135 BCL11AQ9H165 835 aa14.75□□□□□ -0.05
SCN1B-208ENST00000640135 HNRNPUQ00839 825 aaKnown RBP eCLIP14.74□□□□□ -0.05
SCN1B-208ENST00000640135 CFAP53Q96M91 514 aa14.74□□□□□ -0.05
SCN1B-208ENST00000640135 FAM9BQ8IZU0 186 aa14.73□□□□□ -0.05
SCN1B-208ENST00000640135 TDRD9Q8NDG6 1382 aaKnown RBP14.71□□□□□ -0.05
SCN1B-208ENST00000640135 EFCAB2Q5VUJ9 269 aa14.71□□□□□ -0.05
SCN1B-208ENST00000640135 MRS2Q9HD23 443 aa14.71□□□□□ -0.05
SCN1B-208ENST00000640135 ABCC8Q09428 1581 aa14.7□□□□□ -0.06
SCN1B-208ENST00000640135 FMN1Q68DA7 1419 aa14.7□□□□□ -0.06
SCN1B-208ENST00000640135 POGKQ9P215 609 aa14.7□□□□□ -0.06
SCN1B-208ENST00000640135 UPF2Q9HAU5 1272 aaKnown RBP14.69□□□□□ -0.06
SCN1B-208ENST00000640135 KNSTRNQ9Y448 316 aa14.68□□□□□ -0.06
SCN1B-208ENST00000640135 CARD11Q9BXL7 1154 aa14.67□□□□□ -0.06
SCN1B-208ENST00000640135 WIZO95785 1651 aa14.67□□□□□ -0.06
SCN1B-208ENST00000640135 GTF3C3Q9Y5Q9 886 aa14.66□□□□□ -0.06
SCN1B-208ENST00000640135 ANP32AP39687 249 aaKnown RBP14.64□□□□□ -0.07
SCN1B-208ENST00000640135 RSPH4AQ5TD94 716 aa14.64□□□□□ -0.07
SCN1B-208ENST00000640135 A0A0G2JS52 829 aa14.64□□□□□ -0.07
SCN1B-208ENST00000640135 ZBTB7CA1YPR0 619 aa14.64□□□□□ -0.07
SCN1B-208ENST00000640135 TIMELESSQ9UNS1 1208 aa14.64□□□□□ -0.07
SCN1B-208ENST00000640135 MYH16Q9H6N6 1097 aa14.63□□□□□ -0.07
SCN1B-208ENST00000640135 NUDCQ9Y266 331 aa14.62□□□□□ -0.07
SCN1B-208ENST00000640135 SALL2Q9Y467 1007 aaPredicted RBP14.61□□□□□ -0.07
SCN1B-208ENST00000640135 FANCD2Q9BXW9 1451 aa14.6□□□□□ -0.07
SCN1B-208ENST00000640135 VPS8Q8N3P4 1428 aa14.59□□□□□ -0.07
SCN1B-208ENST00000640135 ARHGAP35Q9NRY4 1499 aa14.59□□□□□ -0.07
SCN1B-208ENST00000640135 MLECQ14165 292 aa14.59□□□□□ -0.07
SCN1B-208ENST00000640135 JPH4Q96JJ6 628 aa14.59□□□□□ -0.07
SCN1B-208ENST00000640135 RAPGEF2Q9Y4G8 1499 aa14.58□□□□□ -0.08
SCN1B-208ENST00000640135 HSP90AA1P07900 732 aaKnown RBP14.57□□□□□ -0.08
SCN1B-208ENST00000640135 GGT6Q6P531 493 aa14.57□□□□□ -0.08
SCN1B-208ENST00000640135 CC2D2AQ9P2K1 1620 aa14.57□□□□□ -0.08
SCN1B-208ENST00000640135 PNNQ9H307 717 aaKnown RBP14.56□□□□□ -0.08
SCN1B-208ENST00000640135 SENP3Q9H4L4 574 aaPredicted RBP14.56□□□□□ -0.08
SCN1B-208ENST00000640135 OSCARQ8IYS5 282 aa14.54□□□□□ -0.08
SCN1B-208ENST00000640135 ANKRD30AQ9BXX3 1397 aa14.54□□□□□ -0.08
SCN1B-208ENST00000640135 TMF1P82094 1093 aa14.54□□□□□ -0.08
SCN1B-208ENST00000640135 LMOD2Q6P5Q4 547 aa14.54□□□□□ -0.08
SCN1B-208ENST00000640135 MAPK8IP3Q9UPT6 1336 aa14.53□□□□□ -0.08
SCN1B-208ENST00000640135 PLEKHG5O94827 1062 aa14.52□□□□□ -0.08
SCN1B-208ENST00000640135 BICRAQ9NZM4 1560 aa14.52□□□□□ -0.08
SCN1B-208ENST00000640135 CCDC136Q96JN2 1154 aa14.52□□□□□ -0.08
SCN1B-208ENST00000640135 HMGXB3Q12766 1538 aa14.52□□□□□ -0.09
SCN1B-208ENST00000640135 FKBP8Q14318 412 aa14.51□□□□□ -0.09
SCN1B-208ENST00000640135 PPM1GO15355 546 aaPredicted RBP14.5□□□□□ -0.09
SCN1B-208ENST00000640135 DCAF11Q8TEB1 546 aa14.5□□□□□ -0.09
SCN1B-208ENST00000640135 CCDC18Q5T9S5 1454 aa14.49□□□□□ -0.09
SCN1B-208ENST00000640135 EIF5BO60841 1220 aaKnown RBP14.48□□□□□ -0.09
SCN1B-208ENST00000640135 SETD5Q9C0A6 1442 aa14.48□□□□□ -0.09
SCN1B-208ENST00000640135 SPAG9O60271 1321 aaKnown RBP14.47□□□□□ -0.09
SCN1B-208ENST00000640135 HIRIP3Q9BW71 556 aaPredicted RBP14.47□□□□□ -0.09
SCN1B-208ENST00000640135 CHMP4BQ9H444 224 aaKnown RBP14.47□□□□□ -0.09
SCN1B-208ENST00000640135 PKD2Q13563 968 aa14.46□□□□□ -0.09
SCN1B-208ENST00000640135 PTPRGP23470 1445 aa14.46□□□□□ -0.1
SCN1B-208ENST00000640135 EID1Q9Y6B2 187 aa14.45□□□□□ -0.1
SCN1B-208ENST00000640135 SRPK2P78362 688 aaKnown RBP14.45□□□□□ -0.1
SCN1B-208ENST00000640135 ANP32BQ92688 251 aaKnown RBP14.44□□□□□ -0.1
SCN1B-208ENST00000640135 KIF3BO15066 747 aa14.43□□□□□ -0.1
SCN1B-208ENST00000640135 NUP155O75694 1391 aa14.43□□□□□ -0.1
SCN1B-208ENST00000640135 HDGFL2Q7Z4V5 671 aaPredicted RBP14.42□□□□□ -0.1
SCN1B-208ENST00000640135 MS4A1P11836 297 aa14.42□□□□□ -0.1
SCN1B-208ENST00000640135 SIN3AQ96ST3 1273 aa14.41□□□□□ -0.1
SCN1B-208ENST00000640135 WASHC2CQ9Y4E1 1318 aa14.39□□□□□ -0.11
SCN1B-208ENST00000640135 ARXQ96QS3 562 aa14.39□□□□□ -0.11
SCN1B-208ENST00000640135 DNAJC5BQ9UF47 199 aa14.38□□□□□ -0.11
SCN1B-208ENST00000640135 CFTRP13569 1480 aa14.37□□□□□ -0.11
SCN1B-208ENST00000640135 CYB5RLQ6IPT4 315 aa14.37□□□□□ -0.11
SCN1B-208ENST00000640135 FHOD3Q2V2M9 1422 aa14.37□□□□□ -0.11
SCN1B-208ENST00000640135 EIF3AQ14152 1382 aaKnown RBP14.37□□□□□ -0.11
SCN1B-208ENST00000640135 FTSJ3Q8IY81 847 aaKnown RBP14.36□□□□□ -0.11
SCN1B-208ENST00000640135 CHMP4AQ9BY43 222 aa14.36□□□□□ -0.11
SCN1B-208ENST00000640135 KANK4Q5T7N3 995 aaPredicted RBP14.36□□□□□ -0.11
SCN1B-208ENST00000640135 MPHOSPH9Q99550 1183 aa14.36□□□□□ -0.11
SCN1B-208ENST00000640135 GAPVD1Q14C86 1478 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms