RNA–Protein interactions for RNA: ENST00000639943.1

PAX6-261, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-261ENST00000639943 PBRM1Q86U86 1689 aa18.8■□□□□ 0.6
PAX6-261ENST00000639943 THOC2Q8NI27 1593 aaKnown RBP18.76■□□□□ 0.59
PAX6-261ENST00000639943 AQRO60306 1485 aaKnown RBP eCLIP18.75■□□□□ 0.59
PAX6-261ENST00000639943 EFCAB5A4FU69 1503 aa18.74■□□□□ 0.59
PAX6-261ENST00000639943 GRIN2BQ13224 1484 aa18.73■□□□□ 0.59
PAX6-261ENST00000639943 PLPPR3Q6T4P5 718 aa18.73■□□□□ 0.59
PAX6-261ENST00000639943 FHAD1B1AJZ9 1412 aa18.72■□□□□ 0.59
PAX6-261ENST00000639943 ZEB1P37275 1124 aaPredicted RBP18.7■□□□□ 0.58
PAX6-261ENST00000639943 ADAMTS12P58397 1594 aa18.69■□□□□ 0.58
PAX6-261ENST00000639943 ZNF608Q9ULD9 1512 aaPredicted RBP18.68■□□□□ 0.58
PAX6-261ENST00000639943 MAP3K1Q13233 1512 aa18.66■□□□□ 0.58
PAX6-261ENST00000639943 KCNA4P22459 653 aa18.63■□□□□ 0.57
PAX6-261ENST00000639943 EIF4G3O43432 1585 aaKnown RBP18.63■□□□□ 0.57
PAX6-261ENST00000639943 FHOD3Q2V2M9 1422 aa18.62■□□□□ 0.57
PAX6-261ENST00000639943 KANK4Q5T7N3 995 aaPredicted RBP18.62■□□□□ 0.57
PAX6-261ENST00000639943 P3H3Q8IVL6 736 aa18.62■□□□□ 0.57
PAX6-261ENST00000639943 SAMD9Q5K651 1589 aa18.61■□□□□ 0.57
PAX6-261ENST00000639943 TIAM1Q13009 1591 aa18.6■□□□□ 0.57
PAX6-261ENST00000639943 PCF11O94913 1555 aaKnown RBP18.59■□□□□ 0.57
PAX6-261ENST00000639943 FMN1Q68DA7 1419 aa18.58■□□□□ 0.56
PAX6-261ENST00000639943 FYCO1Q9BQS8 1478 aa18.58■□□□□ 0.56
PAX6-261ENST00000639943 SNAPC4Q5SXM2 1469 aa18.57■□□□□ 0.56
PAX6-261ENST00000639943 PELP1Q8IZL8 1130 aaKnown RBP18.57■□□□□ 0.56
PAX6-261ENST00000639943 CASKIN1Q8WXD9 1431 aa18.56■□□□□ 0.56
PAX6-261ENST00000639943 IQGAP2Q13576 1575 aa18.55■□□□□ 0.56
PAX6-261ENST00000639943 MYT1Q01538 1121 aa18.55■□□□□ 0.56
PAX6-261ENST00000639943 CFAP43Q8NDM7 1665 aa18.55■□□□□ 0.56
PAX6-261ENST00000639943 MAGI1Q96QZ7 1491 aaPredicted RBP18.54■□□□□ 0.56
PAX6-261ENST00000639943 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.53■□□□□ 0.56
PAX6-261ENST00000639943 LRRC9Q6ZRR7 1453 aa18.52■□□□□ 0.55
PAX6-261ENST00000639943 CCER1Q8TC90 406 aaPredicted RBP18.51■□□□□ 0.55
PAX6-261ENST00000639943 RRBP1Q9P2E9 1410 aaKnown RBP18.51■□□□□ 0.55
PAX6-261ENST00000639943 GRIN2AQ12879 1464 aa18.5■□□□□ 0.55
PAX6-261ENST00000639943 HNRNPUL2Q1KMD3 747 aaKnown RBP18.49■□□□□ 0.55
PAX6-261ENST00000639943 ATP1B4Q9UN42 357 aaPredicted RBP18.48■□□□□ 0.55
PAX6-261ENST00000639943 KIAA0586Q9BVV6 1533 aa18.48■□□□□ 0.55
PAX6-261ENST00000639943 SYNJ2O15056 1496 aa18.47■□□□□ 0.55
PAX6-261ENST00000639943 UGGT2Q9NYU1 1516 aa18.47■□□□□ 0.55
PAX6-261ENST00000639943 CHMP7Q8WUX9 453 aaPredicted RBP18.43■□□□□ 0.54
PAX6-261ENST00000639943 CCNB3Q8WWL7 1395 aa18.43■□□□□ 0.54
PAX6-261ENST00000639943 LRRIQ1Q96JM4 1722 aa18.38■□□□□ 0.53
PAX6-261ENST00000639943 CEP170Q5SW79 1584 aa18.37■□□□□ 0.53
PAX6-261ENST00000639943 KIAA0556O60303 1618 aa18.36■□□□□ 0.53
PAX6-261ENST00000639943 PHLDB1Q86UU1 1377 aa18.35■□□□□ 0.53
PAX6-261ENST00000639943 FBLN2P98095 1184 aa18.35■□□□□ 0.53
PAX6-261ENST00000639943 NUP160Q12769 1436 aa18.35■□□□□ 0.53
PAX6-261ENST00000639943 HECW1Q76N89 1606 aa18.35■□□□□ 0.53
PAX6-261ENST00000639943 CCDC18Q5T9S5 1454 aa18.35■□□□□ 0.53
PAX6-261ENST00000639943 DISP1Q96F81 1524 aa18.34■□□□□ 0.53
PAX6-261ENST00000639943 MTUS2Q5JR59 1369 aa18.33■□□□□ 0.53
PAX6-261ENST00000639943 EHBP1L1Q8N3D4 1523 aa18.29■□□□□ 0.52
PAX6-261ENST00000639943 SUPT6HQ7KZ85 1726 aaKnown RBP18.27■□□□□ 0.52
PAX6-261ENST00000639943 EPRSP07814 1512 aaKnown RBP18.27■□□□□ 0.52
PAX6-261ENST00000639943 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.26■□□□□ 0.51
PAX6-261ENST00000639943 CARMIL2Q6F5E8 1435 aa18.25■□□□□ 0.51
PAX6-261ENST00000639943 JPH4Q96JJ6 628 aa18.25■□□□□ 0.51
PAX6-261ENST00000639943 RTN4Q9NQC3 1192 aaKnown RBP18.24■□□□□ 0.51
PAX6-261ENST00000639943 FAM50AQ14320 339 aaKnown RBP18.23■□□□□ 0.51
PAX6-261ENST00000639943 NCOA2Q15596 1464 aa18.23■□□□□ 0.51
PAX6-261ENST00000639943 RAPGEF6Q8TEU7 1601 aa18.23■□□□□ 0.51
PAX6-261ENST00000639943 ITGAEP38570 1179 aa18.22■□□□□ 0.51
PAX6-261ENST00000639943 FGD6Q6ZV73 1430 aa18.22■□□□□ 0.51
PAX6-261ENST00000639943 MAGI3Q5TCQ9 1506 aa18.21■□□□□ 0.51
PAX6-261ENST00000639943 CHD1O14646 1710 aa18.2■□□□□ 0.5
PAX6-261ENST00000639943 CDK13Q14004 1512 aaKnown RBP18.19■□□□□ 0.5
PAX6-261ENST00000639943 ARHGEF11O15085 1522 aa18.19■□□□□ 0.5
PAX6-261ENST00000639943 MYOM3Q5VTT5 1437 aa18.19■□□□□ 0.5
PAX6-261ENST00000639943 NUP153P49790 1475 aaKnown RBP18.17■□□□□ 0.5
PAX6-261ENST00000639943 CLSPNQ9HAW4 1339 aa18.17■□□□□ 0.5
PAX6-261ENST00000639943 DHX57Q6P158 1386 aaKnown RBP18.15■□□□□ 0.5
PAX6-261ENST00000639943 SETD5Q9C0A6 1442 aa18.14■□□□□ 0.49
PAX6-261ENST00000639943 CDK11AQ9UQ88 783 aaPredicted RBP18.12■□□□□ 0.49
PAX6-261ENST00000639943 RAB3GAP2Q9H2M9 1393 aa18.12■□□□□ 0.49
PAX6-261ENST00000639943 ADRA2BP18089 450 aa18.11■□□□□ 0.49
PAX6-261ENST00000639943 PLB1Q6P1J6 1458 aa18.1■□□□□ 0.49
PAX6-261ENST00000639943 PTPN23Q9H3S7 1636 aa18.1■□□□□ 0.49
PAX6-261ENST00000639943 ARID3CA6NKF2 412 aa18.1■□□□□ 0.49
PAX6-261ENST00000639943 PRG4Q92954 1404 aaPredicted RBP18.09■□□□□ 0.49
PAX6-261ENST00000639943 ABCA8O94911 1581 aa18.07■□□□□ 0.48
PAX6-261ENST00000639943 MIA2Q96PC5 1412 aa18.07■□□□□ 0.48
PAX6-261ENST00000639943 TCOF1Q13428 1488 aaKnown RBP18.07■□□□□ 0.48
PAX6-261ENST00000639943 SHROOM2Q13796 1616 aa18.07■□□□□ 0.48
PAX6-261ENST00000639943 TROQ12816 1431 aaPredicted RBP18.04■□□□□ 0.48
PAX6-261ENST00000639943 PTPRGP23470 1445 aa18.02■□□□□ 0.48
PAX6-261ENST00000639943 PTPRKQ15262 1439 aa18■□□□□ 0.47
PAX6-261ENST00000639943 ADCY10Q96PN6 1610 aa18■□□□□ 0.47
PAX6-261ENST00000639943 HFM1A2PYH4 1435 aa17.99■□□□□ 0.47
PAX6-261ENST00000639943 ATP10BO94823 1461 aa17.97■□□□□ 0.47
PAX6-261ENST00000639943 CLASP1Q7Z460 1538 aa17.97■□□□□ 0.47
PAX6-261ENST00000639943 ITSN2Q9NZM3 1697 aa17.95■□□□□ 0.46
PAX6-261ENST00000639943 PLEKHD1A6NEE1 506 aa17.95■□□□□ 0.46
PAX6-261ENST00000639943 MAPKBP1O60336 1514 aa17.93■□□□□ 0.46
PAX6-261ENST00000639943 NAIPQ13075 1403 aa17.93■□□□□ 0.46
PAX6-261ENST00000639943 KIF14Q15058 1648 aa17.93■□□□□ 0.46
PAX6-261ENST00000639943 AKNAQ7Z591 1439 aa17.92■□□□□ 0.46
PAX6-261ENST00000639943 UACAQ9BZF9 1416 aa17.92■□□□□ 0.46
PAX6-261ENST00000639943 ERCC6L2Q5T890 1561 aa17.9■□□□□ 0.46
PAX6-261ENST00000639943 GPATCH8Q9UKJ3 1502 aaKnown RBP17.9■□□□□ 0.46
PAX6-261ENST00000639943 GCC2Q8IWJ2 1684 aa17.9■□□□□ 0.46
PAX6-261ENST00000639943 DNMT1P26358 1616 aaKnown RBP17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms