RNA–Protein interactions for RNA: ENST00000639358.1

KCNQ3-207, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

TSL 5

Gene KCNQ3, Length 822 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-207ENST00000639358 TOP2BQ02880 1626 aa23.81■■□□□ 1.4
KCNQ3-207ENST00000639358 ABCC10Q5T3U5 1492 aa23.8■■□□□ 1.4
KCNQ3-207ENST00000639358 BIVM-ERCC5R4GMW8 1640 aa23.77■■□□□ 1.4
KCNQ3-207ENST00000639358 MAPKBP1O60336 1514 aa23.72■■□□□ 1.39
KCNQ3-207ENST00000639358 KDM4FA0A1W2PPD8 638 aa23.69■■□□□ 1.38
KCNQ3-207ENST00000639358 DIP2BQ9P265 1576 aa23.65■■□□□ 1.38
KCNQ3-207ENST00000639358 RUSC2Q8N2Y8 1516 aa23.64■■□□□ 1.37
KCNQ3-207ENST00000639358 KDM6BO15054 1643 aa23.62■■□□□ 1.37
KCNQ3-207ENST00000639358 ADCY10Q96PN6 1610 aa23.6■■□□□ 1.37
KCNQ3-207ENST00000639358 KIAA0586Q9BVV6 1533 aa23.57■■□□□ 1.36
KCNQ3-207ENST00000639358 ILDR1Q86SU0 546 aaPredicted RBP23.53■■□□□ 1.36
KCNQ3-207ENST00000639358 PTPRGP23470 1445 aa23.5■■□□□ 1.35
KCNQ3-207ENST00000639358 IGF1RP08069 1367 aa23.49■■□□□ 1.35
KCNQ3-207ENST00000639358 TSPOAP1O95153 1857 aa23.49■■□□□ 1.35
KCNQ3-207ENST00000639358 TTBK1Q5TCY1 1321 aaPredicted RBP23.47■■□□□ 1.35
KCNQ3-207ENST00000639358 KIF27Q86VH2 1401 aa23.42■■□□□ 1.34
KCNQ3-207ENST00000639358 CARMIL2Q6F5E8 1435 aa23.42■■□□□ 1.34
KCNQ3-207ENST00000639358 TNIKQ9UKE5 1360 aa23.4■■□□□ 1.34
KCNQ3-207ENST00000639358 ABCC2Q92887 1545 aa23.39■■□□□ 1.34
KCNQ3-207ENST00000639358 PLB1Q6P1J6 1458 aa23.39■■□□□ 1.34
KCNQ3-207ENST00000639358 CUL7Q14999 1698 aa23.38■■□□□ 1.33
KCNQ3-207ENST00000639358 ASXL2Q76L83 1435 aa23.37■■□□□ 1.33
KCNQ3-207ENST00000639358 CARMIL1Q5VZK9 1371 aa23.33■■□□□ 1.33
KCNQ3-207ENST00000639358 GLI2P10070 1586 aa23.32■■□□□ 1.32
KCNQ3-207ENST00000639358 ADGRL1O94910 1474 aa23.32■■□□□ 1.32
KCNQ3-207ENST00000639358 UHRF1BP1LA0JNW5 1464 aa23.28■■□□□ 1.32
KCNQ3-207ENST00000639358 UACAQ9BZF9 1416 aa23.27■■□□□ 1.32
KCNQ3-207ENST00000639358 PPRC1Q5VV67 1664 aaKnown RBP23.23■■□□□ 1.31
KCNQ3-207ENST00000639358 TEX14Q8IWB6 1497 aa23.23■■□□□ 1.31
KCNQ3-207ENST00000639358 COL17A1Q9UMD9 1497 aaPredicted RBP23.22■■□□□ 1.31
KCNQ3-207ENST00000639358 IQGAP2Q13576 1575 aa23.22■■□□□ 1.31
KCNQ3-207ENST00000639358 EPRSP07814 1512 aaKnown RBP23.21■■□□□ 1.31
KCNQ3-207ENST00000639358 KDM5BQ9UGL1 1544 aa23.17■■□□□ 1.3
KCNQ3-207ENST00000639358 HECW2Q9P2P5 1572 aa23.14■■□□□ 1.3
KCNQ3-207ENST00000639358 DISP1Q96F81 1524 aa23.14■■□□□ 1.3
KCNQ3-207ENST00000639358 MAP3K4Q9Y6R4 1608 aa23.13■■□□□ 1.29
KCNQ3-207ENST00000639358 ZCCHC11Q5TAX3 1644 aaKnown RBP23.06■■□□□ 1.28
KCNQ3-207ENST00000639358 UGGT2Q9NYU1 1516 aa23.05■■□□□ 1.28
KCNQ3-207ENST00000639358 WDR7Q9Y4E6 1490 aa23.05■■□□□ 1.28
KCNQ3-207ENST00000639358 RAPGEF2Q9Y4G8 1499 aa23.03■■□□□ 1.28
KCNQ3-207ENST00000639358 KCNH8Q96L42 1107 aa23.02■■□□□ 1.28
KCNQ3-207ENST00000639358 CD109Q6YHK3 1445 aa23.01■■□□□ 1.27
KCNQ3-207ENST00000639358 KIAA0556O60303 1618 aa22.98■■□□□ 1.27
KCNQ3-207ENST00000639358 MAGI3Q5TCQ9 1506 aa22.98■■□□□ 1.27
KCNQ3-207ENST00000639358 FBXO41Q8TF61 875 aa22.94■■□□□ 1.26
KCNQ3-207ENST00000639358 FAM9AQ8IZU1 332 aaPredicted RBP22.9■■□□□ 1.26
KCNQ3-207ENST00000639358 GOLGA3Q08378 1498 aa22.9■■□□□ 1.26
KCNQ3-207ENST00000639358 CFAP43Q8NDM7 1665 aa22.89■■□□□ 1.25
KCNQ3-207ENST00000639358 ABCA8O94911 1581 aa22.82■■□□□ 1.24
KCNQ3-207ENST00000639358 ARAP3Q8WWN8 1544 aa22.81■■□□□ 1.24
KCNQ3-207ENST00000639358 KIF21BO75037 1637 aa22.79■■□□□ 1.24
KCNQ3-207ENST00000639358 PHLDB1Q86UU1 1377 aa22.79■■□□□ 1.24
KCNQ3-207ENST00000639358 PTPRMP28827 1452 aa22.75■■□□□ 1.23
KCNQ3-207ENST00000639358 ARID3CA6NKF2 412 aa22.74■■□□□ 1.23
KCNQ3-207ENST00000639358 CTTNBP2Q8WZ74 1663 aa22.74■■□□□ 1.23
KCNQ3-207ENST00000639358 RAPGEF3O95398 923 aa22.72■■□□□ 1.23
KCNQ3-207ENST00000639358 ARID4BQ4LE39 1312 aaPredicted RBP22.71■■□□□ 1.23
KCNQ3-207ENST00000639358 ATP10BO94823 1461 aa22.69■■□□□ 1.22
KCNQ3-207ENST00000639358 P3H3Q8IVL6 736 aa22.67■■□□□ 1.22
KCNQ3-207ENST00000639358 ADAMTSL3P82987 1691 aa22.66■■□□□ 1.22
KCNQ3-207ENST00000639358 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.64■■□□□ 1.21
KCNQ3-207ENST00000639358 HNRNPUL2Q1KMD3 747 aaKnown RBP22.64■■□□□ 1.21
KCNQ3-207ENST00000639358 NEO1Q92859 1461 aa22.63■■□□□ 1.21
KCNQ3-207ENST00000639358 PRXQ9BXM0 1461 aa22.62■■□□□ 1.21
KCNQ3-207ENST00000639358 ABCA9Q8IUA7 1624 aa22.62■■□□□ 1.21
KCNQ3-207ENST00000639358 PCF11O94913 1555 aaKnown RBP22.6■■□□□ 1.21
KCNQ3-207ENST00000639358 LMTK3Q96Q04 1460 aa22.56■■□□□ 1.2
KCNQ3-207ENST00000639358 BCORL1Q5H9F3 1711 aa22.56■■□□□ 1.2
KCNQ3-207ENST00000639358 MADDQ8WXG6 1647 aa22.53■■□□□ 1.2
KCNQ3-207ENST00000639358 PLEKHD1A6NEE1 506 aa22.5■■□□□ 1.19
KCNQ3-207ENST00000639358 HSPA2P54652 639 aa22.49■■□□□ 1.19
KCNQ3-207ENST00000639358 PLPPR3Q6T4P5 718 aa22.49■■□□□ 1.19
KCNQ3-207ENST00000639358 POGZQ7Z3K3 1410 aa22.48■■□□□ 1.19
KCNQ3-207ENST00000639358 DENND4BO75064 1496 aaPredicted RBP22.48■■□□□ 1.19
KCNQ3-207ENST00000639358 FRMPD1Q5SYB0 1578 aa22.48■■□□□ 1.19
KCNQ3-207ENST00000639358 RAPGEF6Q8TEU7 1601 aa22.47■■□□□ 1.19
KCNQ3-207ENST00000639358 CERKQ8TCT0 537 aa22.46■■□□□ 1.19
KCNQ3-207ENST00000639358 AKNAQ7Z591 1439 aa22.44■■□□□ 1.18
KCNQ3-207ENST00000639358 ARHGEF40Q8TER5 1519 aa22.44■■□□□ 1.18
KCNQ3-207ENST00000639358 RIMS1Q86UR5 1692 aaKnown RBP22.43■■□□□ 1.18
KCNQ3-207ENST00000639358 FHOD3Q2V2M9 1422 aa22.43■■□□□ 1.18
KCNQ3-207ENST00000639358 CSRNP3Q8WYN3 585 aa22.42■■□□□ 1.18
KCNQ3-207ENST00000639358 SAMD9Q5K651 1589 aa22.42■■□□□ 1.18
KCNQ3-207ENST00000639358 FANCAO15360 1455 aa22.41■■□□□ 1.18
KCNQ3-207ENST00000639358 NUP153P49790 1475 aaKnown RBP22.41■■□□□ 1.18
KCNQ3-207ENST00000639358 RANGAP1P46060 587 aaPredicted RBP22.4■■□□□ 1.18
KCNQ3-207ENST00000639358 MLECQ14165 292 aa22.38■■□□□ 1.17
KCNQ3-207ENST00000639358 MAGI2Q86UL8 1455 aa22.35■■□□□ 1.17
KCNQ3-207ENST00000639358 RICTORQ6R327 1708 aa22.35■■□□□ 1.17
KCNQ3-207ENST00000639358 CFAP74Q9C0B2 1584 aa22.35■■□□□ 1.17
KCNQ3-207ENST00000639358 EFCAB5A4FU69 1503 aa22.33■■□□□ 1.17
KCNQ3-207ENST00000639358 ZFYVE16Q7Z3T8 1539 aa22.33■■□□□ 1.17
KCNQ3-207ENST00000639358 YEATS2Q9ULM3 1422 aa22.31■■□□□ 1.16
KCNQ3-207ENST00000639358 ZMYM4Q5VZL5 1548 aa22.31■■□□□ 1.16
KCNQ3-207ENST00000639358 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.31■■□□□ 1.16
KCNQ3-207ENST00000639358 DMRT2Q9Y5R5 561 aa22.3■■□□□ 1.16
KCNQ3-207ENST00000639358 SCAPERQ9BY12 1400 aa22.27■■□□□ 1.16
KCNQ3-207ENST00000639358 DISP3Q9P2K9 1392 aa22.26■■□□□ 1.15
KCNQ3-207ENST00000639358 HECW1Q76N89 1606 aa22.24■■□□□ 1.15
KCNQ3-207ENST00000639358 ATP10AO60312 1499 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms