RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 CANXP27824 592 aaKnown RBP19.64■□□□□ 0.74
SCARB2-216ENST00000639300 EIF4G2P78344 907 aaKnown RBP eCLIP19.64■□□□□ 0.73
SCARB2-216ENST00000639300 NPM2Q86SE8 214 aaKnown RBP19.62■□□□□ 0.73
SCARB2-216ENST00000639300 SENP3-EIF4A1A0A087X0R7 540 aa19.61■□□□□ 0.73
SCARB2-216ENST00000639300 KANK4Q5T7N3 995 aaPredicted RBP19.61■□□□□ 0.73
SCARB2-216ENST00000639300 ANP32AP39687 249 aaKnown RBP19.55■□□□□ 0.72
SCARB2-216ENST00000639300 CCNB3Q8WWL7 1395 aa19.54■□□□□ 0.72
SCARB2-216ENST00000639300 CARMIL1Q5VZK9 1371 aa19.53■□□□□ 0.72
SCARB2-216ENST00000639300 WIZO95785 1651 aa19.53■□□□□ 0.72
SCARB2-216ENST00000639300 KCNH8Q96L42 1107 aa19.51■□□□□ 0.71
SCARB2-216ENST00000639300 RGL3Q3MIN7 710 aa19.51■□□□□ 0.71
SCARB2-216ENST00000639300 CCDC136Q96JN2 1154 aa19.51■□□□□ 0.71
SCARB2-216ENST00000639300 CUX2O14529 1486 aa19.51■□□□□ 0.71
SCARB2-216ENST00000639300 VPS8Q8N3P4 1428 aa19.5■□□□□ 0.71
SCARB2-216ENST00000639300 PLEKHD1A6NEE1 506 aa19.5■□□□□ 0.71
SCARB2-216ENST00000639300 CFDP1Q9UEE9 299 aaPredicted RBP19.49■□□□□ 0.71
SCARB2-216ENST00000639300 SLC24A1O60721 1099 aa19.46■□□□□ 0.71
SCARB2-216ENST00000639300 NEFMP07197 916 aa19.46■□□□□ 0.71
SCARB2-216ENST00000639300 NPM1P06748 294 aaKnown RBP eCLIP19.45■□□□□ 0.7
SCARB2-216ENST00000639300 ZBTB47Q9UFB7 747 aaPredicted RBP19.44■□□□□ 0.7
SCARB2-216ENST00000639300 SUPT16HQ9Y5B9 1047 aaKnown RBP19.41■□□□□ 0.7
SCARB2-216ENST00000639300 SENP3Q9H4L4 574 aaPredicted RBP19.41■□□□□ 0.7
SCARB2-216ENST00000639300 STAG3Q9UJ98 1225 aa19.39■□□□□ 0.69
SCARB2-216ENST00000639300 RUSC2Q8N2Y8 1516 aa19.38■□□□□ 0.69
SCARB2-216ENST00000639300 FHAD1B1AJZ9 1412 aa19.36■□□□□ 0.69
SCARB2-216ENST00000639300 WDR43Q15061 677 aaKnown RBP eCLIP19.35■□□□□ 0.69
SCARB2-216ENST00000639300 PLPPR3Q6T4P5 718 aa19.33■□□□□ 0.69
SCARB2-216ENST00000639300 CARD11Q9BXL7 1154 aa19.32■□□□□ 0.68
SCARB2-216ENST00000639300 TOP2AP11388 1531 aaKnown RBP19.32■□□□□ 0.68
SCARB2-216ENST00000639300 ESF1Q9H501 851 aaKnown RBP19.31■□□□□ 0.68
SCARB2-216ENST00000639300 TDRD9Q8NDG6 1382 aaKnown RBP19.29■□□□□ 0.68
SCARB2-216ENST00000639300 NBR1Q14596 966 aa19.29■□□□□ 0.68
SCARB2-216ENST00000639300 FOXD1Q16676 465 aa19.28■□□□□ 0.68
SCARB2-216ENST00000639300 SETD5Q9C0A6 1442 aa19.28■□□□□ 0.68
SCARB2-216ENST00000639300 RAPGEF2Q9Y4G8 1499 aa19.28■□□□□ 0.68
SCARB2-216ENST00000639300 RAB3GAP2Q9H2M9 1393 aa19.27■□□□□ 0.68
SCARB2-216ENST00000639300 SMARCA2P51531 1590 aa19.24■□□□□ 0.67
SCARB2-216ENST00000639300 TIMELESSQ9UNS1 1208 aa19.22■□□□□ 0.67
SCARB2-216ENST00000639300 EIF4G1Q04637 1599 aaKnown RBP19.21■□□□□ 0.67
SCARB2-216ENST00000639300 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.2■□□□□ 0.66
SCARB2-216ENST00000639300 ATAD2BQ9ULI0 1458 aa19.19■□□□□ 0.66
SCARB2-216ENST00000639300 HSPA5P11021 654 aaKnown RBP19.17■□□□□ 0.66
SCARB2-216ENST00000639300 DCAF11Q8TEB1 546 aa19.17■□□□□ 0.66
SCARB2-216ENST00000639300 ARHGAP35Q9NRY4 1499 aa19.15■□□□□ 0.66
SCARB2-216ENST00000639300 PPP1R15AO75807 674 aaPredicted RBP19.14■□□□□ 0.66
SCARB2-216ENST00000639300 KNSTRNQ9Y448 316 aa19.13■□□□□ 0.65
SCARB2-216ENST00000639300 SMARCA4P51532 1647 aa19.12■□□□□ 0.65
SCARB2-216ENST00000639300 B4GALNT3Q6L9W6 998 aa19.12■□□□□ 0.65
SCARB2-216ENST00000639300 UPF2Q9HAU5 1272 aaKnown RBP19.12■□□□□ 0.65
SCARB2-216ENST00000639300 FHOD3Q2V2M9 1422 aa19.11■□□□□ 0.65
SCARB2-216ENST00000639300 CADPSQ9ULU8 1353 aa19.11■□□□□ 0.65
SCARB2-216ENST00000639300 ERCC6Q03468 1493 aa19.1■□□□□ 0.65
SCARB2-216ENST00000639300 PKD2Q13563 968 aa19.1■□□□□ 0.65
SCARB2-216ENST00000639300 CC2D1BQ5T0F9 858 aaKnown RBP19.1■□□□□ 0.65
SCARB2-216ENST00000639300 MPHOSPH9Q99550 1183 aa19.09■□□□□ 0.65
SCARB2-216ENST00000639300 HSP90AA1P07900 732 aaKnown RBP19.09■□□□□ 0.65
SCARB2-216ENST00000639300 CCER2I3L3R5 266 aa19.08■□□□□ 0.65
SCARB2-216ENST00000639300 NEUROD2Q15784 382 aa19.08■□□□□ 0.64
SCARB2-216ENST00000639300 PPP4R2Q9NY27 417 aa19.07■□□□□ 0.64
SCARB2-216ENST00000639300 DHX57Q6P158 1386 aaKnown RBP19.06■□□□□ 0.64
SCARB2-216ENST00000639300 FMN1Q68DA7 1419 aa19.04■□□□□ 0.64
SCARB2-216ENST00000639300 L3MBTL2Q969R5 705 aa19.03■□□□□ 0.64
SCARB2-216ENST00000639300 TNNT2P45379 298 aaPredicted RBP19.03■□□□□ 0.64
SCARB2-216ENST00000639300 CDCA8Q53HL2 280 aa19.02■□□□□ 0.64
SCARB2-216ENST00000639300 ARXQ96QS3 562 aa19■□□□□ 0.63
SCARB2-216ENST00000639300 ANP32EQ9BTT0 268 aa18.99■□□□□ 0.63
SCARB2-216ENST00000639300 PDS5BQ9NTI5 1447 aa18.99■□□□□ 0.63
SCARB2-216ENST00000639300 PPM1GO15355 546 aaPredicted RBP18.98■□□□□ 0.63
SCARB2-216ENST00000639300 PLEKHG5O94827 1062 aa18.96■□□□□ 0.63
SCARB2-216ENST00000639300 NUP155O75694 1391 aa18.93■□□□□ 0.62
SCARB2-216ENST00000639300 TMF1P82094 1093 aa18.93■□□□□ 0.62
SCARB2-216ENST00000639300 CFAP53Q96M91 514 aa18.92■□□□□ 0.62
SCARB2-216ENST00000639300 RGS3P49796 1198 aa18.92■□□□□ 0.62
SCARB2-216ENST00000639300 IGF1RP08069 1367 aa18.9■□□□□ 0.62
SCARB2-216ENST00000639300 RBM19Q9Y4C8 960 aaKnown RBP18.9■□□□□ 0.62
SCARB2-216ENST00000639300 EIF5BO60841 1220 aaKnown RBP18.9■□□□□ 0.62
SCARB2-216ENST00000639300 FRAT1Q92837 279 aaPredicted RBP18.89■□□□□ 0.61
SCARB2-216ENST00000639300 HNRNPMP52272 730 aaKnown RBP eCLIP18.88■□□□□ 0.61
SCARB2-216ENST00000639300 CARMIL2Q6F5E8 1435 aa18.84■□□□□ 0.61
SCARB2-216ENST00000639300 SAFB2Q14151 953 aaKnown RBP eCLIP18.84■□□□□ 0.61
SCARB2-216ENST00000639300 POGKQ9P215 609 aa18.84■□□□□ 0.61
SCARB2-216ENST00000639300 GGT6Q6P531 493 aa18.83■□□□□ 0.61
SCARB2-216ENST00000639300 JPH4Q96JJ6 628 aa18.83■□□□□ 0.61
SCARB2-216ENST00000639300 LAS1LQ9Y4W2 734 aaKnown RBP18.83■□□□□ 0.6
SCARB2-216ENST00000639300 FANCD2Q9BXW9 1451 aa18.82■□□□□ 0.6
SCARB2-216ENST00000639300 C14orf37Q86TY3 774 aa18.82■□□□□ 0.6
SCARB2-216ENST00000639300 U2SURPO15042 1029 aaKnown RBP18.82■□□□□ 0.6
SCARB2-216ENST00000639300 TSHZ2Q9NRE2 1034 aa18.82■□□□□ 0.6
SCARB2-216ENST00000639300 ANKRD30AQ9BXX3 1397 aa18.81■□□□□ 0.6
SCARB2-216ENST00000639300 ZBTB7CA1YPR0 619 aa18.81■□□□□ 0.6
SCARB2-216ENST00000639300 MYH16Q9H6N6 1097 aa18.8■□□□□ 0.6
SCARB2-216ENST00000639300 FTSJ3Q8IY81 847 aaKnown RBP18.8■□□□□ 0.6
SCARB2-216ENST00000639300 DDRGK1Q96HY6 314 aa18.79■□□□□ 0.6
SCARB2-216ENST00000639300 ARID4BQ4LE39 1312 aaPredicted RBP18.79■□□□□ 0.6
SCARB2-216ENST00000639300 ANP32BQ92688 251 aaKnown RBP18.79■□□□□ 0.6
SCARB2-216ENST00000639300 ROCK2O75116 1388 aaKnown RBP18.78■□□□□ 0.6
SCARB2-216ENST00000639300 MAPK8IP3Q9UPT6 1336 aa18.77■□□□□ 0.6
SCARB2-216ENST00000639300 EFCAB2Q5VUJ9 269 aa18.77■□□□□ 0.59
SCARB2-216ENST00000639300 NUDCQ9Y266 331 aa18.76■□□□□ 0.59
SCARB2-216ENST00000639300 NOP58Q9Y2X3 529 aaKnown RBP18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms