RNA–Protein interactions for RNA: ENST00000639090.1

KCNMA1-251, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 4,319 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-251ENST00000639090 MRS2Q9HD23 443 aa21.86■■□□□ 1.09
KCNMA1-251ENST00000639090 RGL3Q3MIN7 710 aa21.86■■□□□ 1.09
KCNMA1-251ENST00000639090 TNIKQ9UKE5 1360 aa21.85■■□□□ 1.09
KCNMA1-251ENST00000639090 NPM2Q86SE8 214 aaKnown RBP21.82■■□□□ 1.08
KCNMA1-251ENST00000639090 CFDP1Q9UEE9 299 aaPredicted RBP21.82■■□□□ 1.08
KCNMA1-251ENST00000639090 EIF4G2P78344 907 aaKnown RBP eCLIP21.8■■□□□ 1.08
KCNMA1-251ENST00000639090 BAZ1AQ9NRL2 1556 aaPredicted RBP21.8■■□□□ 1.08
KCNMA1-251ENST00000639090 SOGA1O94964 1423 aa21.77■■□□□ 1.07
KCNMA1-251ENST00000639090 CEP164Q9UPV0 1460 aa21.76■■□□□ 1.07
KCNMA1-251ENST00000639090 SENP3-EIF4A1A0A087X0R7 540 aa21.75■■□□□ 1.07
KCNMA1-251ENST00000639090 SIN3AQ96ST3 1273 aa21.73■■□□□ 1.07
KCNMA1-251ENST00000639090 IRX6P78412 446 aaPredicted RBP21.71■■□□□ 1.07
KCNMA1-251ENST00000639090 ANP32AP39687 249 aaKnown RBP21.7■■□□□ 1.06
KCNMA1-251ENST00000639090 WDR43Q15061 677 aaKnown RBP eCLIP21.67■■□□□ 1.06
KCNMA1-251ENST00000639090 MROH2BQ7Z745 1585 aa21.66■■□□□ 1.06
KCNMA1-251ENST00000639090 CARMIL1Q5VZK9 1371 aa21.64■■□□□ 1.06
KCNMA1-251ENST00000639090 CCDC136Q96JN2 1154 aa21.64■■□□□ 1.05
KCNMA1-251ENST00000639090 PLEKHG5O94827 1062 aa21.63■■□□□ 1.05
KCNMA1-251ENST00000639090 CUX2O14529 1486 aa21.62■■□□□ 1.05
KCNMA1-251ENST00000639090 ERCC6Q03468 1493 aa21.6■■□□□ 1.05
KCNMA1-251ENST00000639090 PPP1R15AO75807 674 aaPredicted RBP21.56■■□□□ 1.04
KCNMA1-251ENST00000639090 CCDC88BA6NC98 1476 aa21.56■■□□□ 1.04
KCNMA1-251ENST00000639090 SCAF1Q9H7N4 1312 aaKnown RBP21.55■■□□□ 1.04
KCNMA1-251ENST00000639090 CARD11Q9BXL7 1154 aa21.53■■□□□ 1.04
KCNMA1-251ENST00000639090 KANK4Q5T7N3 995 aaPredicted RBP21.51■■□□□ 1.03
KCNMA1-251ENST00000639090 CCNB3Q8WWL7 1395 aa21.51■■□□□ 1.03
KCNMA1-251ENST00000639090 ABCC8Q09428 1581 aa21.51■■□□□ 1.03
KCNMA1-251ENST00000639090 TDRD9Q8NDG6 1382 aaKnown RBP21.48■■□□□ 1.03
KCNMA1-251ENST00000639090 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.48■■□□□ 1.03
KCNMA1-251ENST00000639090 ARID4BQ4LE39 1312 aaPredicted RBP21.48■■□□□ 1.03
KCNMA1-251ENST00000639090 HSP90AA1P07900 732 aaKnown RBP21.45■■□□□ 1.02
KCNMA1-251ENST00000639090 C14orf37Q86TY3 774 aa21.44■■□□□ 1.02
KCNMA1-251ENST00000639090 FHAD1B1AJZ9 1412 aa21.44■■□□□ 1.02
KCNMA1-251ENST00000639090 ZBTB7CA1YPR0 619 aa21.42■■□□□ 1.02
KCNMA1-251ENST00000639090 UPF2Q9HAU5 1272 aaKnown RBP21.41■■□□□ 1.02
KCNMA1-251ENST00000639090 EIF4G1Q04637 1599 aaKnown RBP21.41■■□□□ 1.02
KCNMA1-251ENST00000639090 PPM1GO15355 546 aaPredicted RBP21.4■■□□□ 1.02
KCNMA1-251ENST00000639090 KNSTRNQ9Y448 316 aa21.4■■□□□ 1.02
KCNMA1-251ENST00000639090 DCAF11Q8TEB1 546 aa21.36■■□□□ 1.01
KCNMA1-251ENST00000639090 NEUROD2Q15784 382 aa21.36■■□□□ 1.01
KCNMA1-251ENST00000639090 VPS8Q8N3P4 1428 aa21.35■■□□□ 1.01
KCNMA1-251ENST00000639090 FOXD1Q16676 465 aa21.35■■□□□ 1.01
KCNMA1-251ENST00000639090 A0A0G2JS52 829 aa21.35■■□□□ 1.01
KCNMA1-251ENST00000639090 SUPT16HQ9Y5B9 1047 aaKnown RBP21.35■■□□□ 1.01
KCNMA1-251ENST00000639090 TNNT2P45379 298 aaPredicted RBP21.32■■□□□ 1
KCNMA1-251ENST00000639090 CDCA8Q53HL2 280 aa21.31■■□□□ 1
KCNMA1-251ENST00000639090 MLECQ14165 292 aa21.28■■□□□ 1
KCNMA1-251ENST00000639090 POGKQ9P215 609 aa21.27■■□□□ 1
KCNMA1-251ENST00000639090 NBR1Q14596 966 aa21.26■□□□□ 0.99
KCNMA1-251ENST00000639090 CC2D1BQ5T0F9 858 aaKnown RBP21.26■□□□□ 0.99
KCNMA1-251ENST00000639090 CFAP53Q96M91 514 aa21.25■□□□□ 0.99
KCNMA1-251ENST00000639090 WIZO95785 1651 aa21.25■□□□□ 0.99
KCNMA1-251ENST00000639090 PDS5BQ9NTI5 1447 aa21.24■□□□□ 0.99
KCNMA1-251ENST00000639090 PKD2Q13563 968 aa21.24■□□□□ 0.99
KCNMA1-251ENST00000639090 GGT6Q6P531 493 aa21.24■□□□□ 0.99
KCNMA1-251ENST00000639090 SMARCA2P51531 1590 aa21.24■□□□□ 0.99
KCNMA1-251ENST00000639090 SETD5Q9C0A6 1442 aa21.2■□□□□ 0.98
KCNMA1-251ENST00000639090 CADPSQ9ULU8 1353 aa21.2■□□□□ 0.98
KCNMA1-251ENST00000639090 SAFB2Q14151 953 aaKnown RBP eCLIP21.19■□□□□ 0.98
KCNMA1-251ENST00000639090 LMOD2Q6P5Q4 547 aa21.19■□□□□ 0.98
KCNMA1-251ENST00000639090 ARXQ96QS3 562 aa21.17■□□□□ 0.98
KCNMA1-251ENST00000639090 MYH16Q9H6N6 1097 aa21.17■□□□□ 0.98
KCNMA1-251ENST00000639090 LAS1LQ9Y4W2 734 aaKnown RBP21.15■□□□□ 0.98
KCNMA1-251ENST00000639090 ARHGAP35Q9NRY4 1499 aa21.15■□□□□ 0.98
KCNMA1-251ENST00000639090 HSPA5P11021 654 aaKnown RBP21.14■□□□□ 0.98
KCNMA1-251ENST00000639090 TRHP20396 242 aaPredicted RBP21.14■□□□□ 0.98
KCNMA1-251ENST00000639090 TIMELESSQ9UNS1 1208 aa21.14■□□□□ 0.98
KCNMA1-251ENST00000639090 RAB3GAP2Q9H2M9 1393 aa21.14■□□□□ 0.97
KCNMA1-251ENST00000639090 U2SURPO15042 1029 aaKnown RBP21.12■□□□□ 0.97
KCNMA1-251ENST00000639090 TMF1P82094 1093 aa21.12■□□□□ 0.97
KCNMA1-251ENST00000639090 MPHOSPH9Q99550 1183 aa21.12■□□□□ 0.97
KCNMA1-251ENST00000639090 ATAD2BQ9ULI0 1458 aa21.11■□□□□ 0.97
KCNMA1-251ENST00000639090 CARMIL2Q6F5E8 1435 aa21.11■□□□□ 0.97
KCNMA1-251ENST00000639090 FHOD3Q2V2M9 1422 aa21.1■□□□□ 0.97
KCNMA1-251ENST00000639090 TOP2AP11388 1531 aaKnown RBP21.1■□□□□ 0.97
KCNMA1-251ENST00000639090 HAP1P54257 671 aaPredicted RBP21.1■□□□□ 0.97
KCNMA1-251ENST00000639090 RUSC2Q8N2Y8 1516 aa21.1■□□□□ 0.97
KCNMA1-251ENST00000639090 RAPGEF2Q9Y4G8 1499 aa21.09■□□□□ 0.97
KCNMA1-251ENST00000639090 SOX12O15370 315 aa21.09■□□□□ 0.97
KCNMA1-251ENST00000639090 FRAT1Q92837 279 aaPredicted RBP21.09■□□□□ 0.97
KCNMA1-251ENST00000639090 MAPK8IP3Q9UPT6 1336 aa21.09■□□□□ 0.97
KCNMA1-251ENST00000639090 NUDCQ9Y266 331 aa21.08■□□□□ 0.97
KCNMA1-251ENST00000639090 FMN1Q68DA7 1419 aa21.08■□□□□ 0.97
KCNMA1-251ENST00000639090 NUP155O75694 1391 aa21.08■□□□□ 0.96
KCNMA1-251ENST00000639090 EFCAB2Q5VUJ9 269 aa21.08■□□□□ 0.96
KCNMA1-251ENST00000639090 JPH4Q96JJ6 628 aa21.07■□□□□ 0.96
KCNMA1-251ENST00000639090 ANP32BQ92688 251 aaKnown RBP21.06■□□□□ 0.96
KCNMA1-251ENST00000639090 STK26Q9P289 416 aa21.06■□□□□ 0.96
KCNMA1-251ENST00000639090 HNRNPMP52272 730 aaKnown RBP eCLIP21.06■□□□□ 0.96
KCNMA1-251ENST00000639090 SRPK2P78362 688 aaKnown RBP21.05■□□□□ 0.96
KCNMA1-251ENST00000639090 KANK1Q14678 1352 aa21.05■□□□□ 0.96
KCNMA1-251ENST00000639090 FTSJ3Q8IY81 847 aaKnown RBP21.05■□□□□ 0.96
KCNMA1-251ENST00000639090 B4GALNT3Q6L9W6 998 aa21.03■□□□□ 0.96
KCNMA1-251ENST00000639090 RGS3P49796 1198 aa21.02■□□□□ 0.96
KCNMA1-251ENST00000639090 L3MBTL2Q969R5 705 aa21■□□□□ 0.95
KCNMA1-251ENST00000639090 KIF3BO15066 747 aa21■□□□□ 0.95
KCNMA1-251ENST00000639090 PPP4R2Q9NY27 417 aa20.96■□□□□ 0.95
KCNMA1-251ENST00000639090 MORC1Q86VD1 984 aa20.95■□□□□ 0.94
KCNMA1-251ENST00000639090 ANKRD30AQ9BXX3 1397 aa20.94■□□□□ 0.94
KCNMA1-251ENST00000639090 EIF5BO60841 1220 aaKnown RBP20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms