RNA–Protein interactions for RNA: ENST00000637530.1

CACNB4-255, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, human

TSL 5

Gene CACNB4, Length 3,104 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB4-255	ENST00000637530	SOGA1	O94964	1423 aa		11.82	□□□□□ -0.52
CACNB4-255	ENST00000637530	B4GALNT3	Q6L9W6	998 aa		11.81	□□□□□ -0.52
CACNB4-255	ENST00000637530	BRPF3	Q9ULD4	1205 aa		11.81	□□□□□ -0.52
CACNB4-255	ENST00000637530	WASHC2C	Q9Y4E1	1318 aa		11.81	□□□□□ -0.52
CACNB4-255	ENST00000637530	ZBTB47	Q9UFB7	747 aa	Predicted RBP	11.8	□□□□□ -0.52
CACNB4-255	ENST00000637530	ZMYND15	Q9H091	742 aa		11.79	□□□□□ -0.52
CACNB4-255	ENST00000637530	ANP32C	O43423	234 aa		11.78	□□□□□ -0.52
CACNB4-255	ENST00000637530	ANP32A	P39687	249 aa	Known RBP	11.78	□□□□□ -0.52
CACNB4-255	ENST00000637530	GOLGA3	Q08378	1498 aa		11.75	□□□□□ -0.53
CACNB4-255	ENST00000637530	HNRNPU	Q00839	825 aa	Known RBP eCLIP	11.75	□□□□□ -0.53
CACNB4-255	ENST00000637530	RUSC2	Q8N2Y8	1516 aa		11.75	□□□□□ -0.53
CACNB4-255	ENST00000637530	CLIP1	P30622	1438 aa		11.74	□□□□□ -0.53
CACNB4-255	ENST00000637530	NEFM	P07197	916 aa		11.74	□□□□□ -0.53
CACNB4-255	ENST00000637530	WDR97	A6NE52	1622 aa		11.73	□□□□□ -0.53
CACNB4-255	ENST00000637530	VPS8	Q8N3P4	1428 aa		11.73	□□□□□ -0.53
CACNB4-255	ENST00000637530	VSIG10	Q8N0Z9	540 aa		11.73	□□□□□ -0.53
CACNB4-255	ENST00000637530	RSPH6A	Q9H0K4	717 aa		11.73	□□□□□ -0.53
CACNB4-255	ENST00000637530	HIRIP3	Q9BW71	556 aa	Predicted RBP	11.71	□□□□□ -0.53
CACNB4-255	ENST00000637530	LAS1L	Q9Y4W2	734 aa	Known RBP	11.71	□□□□□ -0.53
CACNB4-255	ENST00000637530	SCRIB	Q14160	1630 aa		11.71	□□□□□ -0.53
CACNB4-255	ENST00000637530	EEA1	Q15075	1411 aa		11.71	□□□□□ -0.54
CACNB4-255	ENST00000637530	USP35	Q9P2H5	1018 aa		11.71	□□□□□ -0.54
CACNB4-255	ENST00000637530	MAPKBP1	O60336	1514 aa		11.69	□□□□□ -0.54
CACNB4-255	ENST00000637530	GLIPR1L2	Q4G1C9	344 aa		11.69	□□□□□ -0.54
CACNB4-255	ENST00000637530	WIZ	O95785	1651 aa		11.68	□□□□□ -0.54
CACNB4-255	ENST00000637530	ERCC6L2	Q5T890	1561 aa		11.68	□□□□□ -0.54
CACNB4-255	ENST00000637530	MROH2B	Q7Z745	1585 aa		11.67	□□□□□ -0.54
CACNB4-255	ENST00000637530	GSE1	Q14687	1217 aa		11.64	□□□□□ -0.55
CACNB4-255	ENST00000637530	SIN3A	Q96ST3	1273 aa		11.63	□□□□□ -0.55
CACNB4-255	ENST00000637530	NPM2	Q86SE8	214 aa	Known RBP	11.61	□□□□□ -0.55
CACNB4-255	ENST00000637530	FAM43A	Q8N2R8	423 aa		11.61	□□□□□ -0.55
CACNB4-255	ENST00000637530	CEP164	Q9UPV0	1460 aa		11.59	□□□□□ -0.55
CACNB4-255	ENST00000637530	PPM1G	O15355	546 aa	Predicted RBP	11.59	□□□□□ -0.55
CACNB4-255	ENST00000637530	FRAT1	Q92837	279 aa	Predicted RBP	11.59	□□□□□ -0.55
CACNB4-255	ENST00000637530	RRBP1	Q9P2E9	1410 aa	Known RBP	11.58	□□□□□ -0.56
CACNB4-255	ENST00000637530	KIF21B	O75037	1637 aa		11.58	□□□□□ -0.56
CACNB4-255	ENST00000637530	BAZ1B	Q9UIG0	1483 aa	Known RBP	11.58	□□□□□ -0.56
CACNB4-255	ENST00000637530	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	11.58	□□□□□ -0.56
CACNB4-255	ENST00000637530	NCAPD3	P42695	1498 aa		11.57	□□□□□ -0.56
CACNB4-255	ENST00000637530	RAB3GAP2	Q9H2M9	1393 aa		11.57	□□□□□ -0.56
CACNB4-255	ENST00000637530		A0A0U1RQG5	324 aa	Predicted RBP	11.56	□□□□□ -0.56
CACNB4-255	ENST00000637530	KANK4	Q5T7N3	995 aa	Predicted RBP	11.55	□□□□□ -0.56
CACNB4-255	ENST00000637530	RANGAP1	P46060	587 aa	Predicted RBP	11.55	□□□□□ -0.56
CACNB4-255	ENST00000637530	THOC2	Q8NI27	1593 aa	Known RBP	11.55	□□□□□ -0.56
CACNB4-255	ENST00000637530	PEG3	Q9GZU2	1588 aa		11.54	□□□□□ -0.56
CACNB4-255	ENST00000637530	DCAF11	Q8TEB1	546 aa		11.53	□□□□□ -0.56
CACNB4-255	ENST00000637530	SMARCA2	P51531	1590 aa		11.53	□□□□□ -0.56
CACNB4-255	ENST00000637530	CCDC184	Q52MB2	194 aa		11.52	□□□□□ -0.56
CACNB4-255	ENST00000637530	NFKBIB	Q15653	356 aa		11.52	□□□□□ -0.57
CACNB4-255	ENST00000637530	RBM10	P98175	930 aa	Known RBP	11.51	□□□□□ -0.57
CACNB4-255	ENST00000637530	AKNA	Q7Z591	1439 aa		11.5	□□□□□ -0.57
CACNB4-255	ENST00000637530	CCNB3	Q8WWL7	1395 aa		11.5	□□□□□ -0.57
CACNB4-255	ENST00000637530	ZBED9	Q6R2W3	1325 aa		11.5	□□□□□ -0.57
CACNB4-255	ENST00000637530	HSP90AA2P	Q14568	343 aa	Predicted RBP	11.49	□□□□□ -0.57
CACNB4-255	ENST00000637530	AAMP	Q13685	434 aa		11.49	□□□□□ -0.57
CACNB4-255	ENST00000637530	RRAGD	Q9NQL2	400 aa	Predicted RBP	11.49	□□□□□ -0.57
CACNB4-255	ENST00000637530	FGD1	P98174	961 aa		11.47	□□□□□ -0.57
CACNB4-255	ENST00000637530	FAM9B	Q8IZU0	186 aa		11.47	□□□□□ -0.57
CACNB4-255	ENST00000637530	PDE4A	P27815	886 aa		11.46	□□□□□ -0.57
CACNB4-255	ENST00000637530	RAPGEF2	Q9Y4G8	1499 aa		11.46	□□□□□ -0.57
CACNB4-255	ENST00000637530	RRP9	O43818	475 aa	Known RBP	11.46	□□□□□ -0.57
CACNB4-255	ENST00000637530	BACH2	Q9BYV9	841 aa		11.44	□□□□□ -0.58
CACNB4-255	ENST00000637530	SETD5	Q9C0A6	1442 aa		11.43	□□□□□ -0.58
CACNB4-255	ENST00000637530	RNF123	Q5XPI4	1314 aa		11.43	□□□□□ -0.58
CACNB4-255	ENST00000637530	ARAP1	Q96P48	1450 aa		11.42	□□□□□ -0.58
CACNB4-255	ENST00000637530	TCERG1	O14776	1098 aa	Known RBP	11.42	□□□□□ -0.58
CACNB4-255	ENST00000637530	HSP90AA1	P07900	732 aa	Known RBP	11.42	□□□□□ -0.58
CACNB4-255	ENST00000637530	NAP1L5	Q96NT1	182 aa	Predicted RBP	11.42	□□□□□ -0.58
CACNB4-255	ENST00000637530	SMG6	Q86US8	1419 aa	Known RBP	11.42	□□□□□ -0.58
CACNB4-255	ENST00000637530	PDE4C	Q08493	712 aa		11.41	□□□□□ -0.58
CACNB4-255	ENST00000637530	ILDR1	Q86SU0	546 aa	Predicted RBP	11.41	□□□□□ -0.58
CACNB4-255	ENST00000637530	SLC4A3	P48751	1232 aa		11.41	□□□□□ -0.58
CACNB4-255	ENST00000637530	AEBP2	Q6ZN18	517 aa	Predicted RBP	11.4	□□□□□ -0.58
CACNB4-255	ENST00000637530	DDRGK1	Q96HY6	314 aa		11.39	□□□□□ -0.59
CACNB4-255	ENST00000637530	MRS2	Q9HD23	443 aa		11.39	□□□□□ -0.59
CACNB4-255	ENST00000637530	FRAT2	O75474	233 aa	Predicted RBP	11.38	□□□□□ -0.59
CACNB4-255	ENST00000637530	TOP2A	P11388	1531 aa	Known RBP	11.38	□□□□□ -0.59
CACNB4-255	ENST00000637530	SYNJ1	O43426	1573 aa		11.38	□□□□□ -0.59
CACNB4-255	ENST00000637530	NUDC	Q9Y266	331 aa		11.37	□□□□□ -0.59
CACNB4-255	ENST00000637530	RIMBP3C	A6NJZ7	1639 aa		11.36	□□□□□ -0.59
CACNB4-255	ENST00000637530	RIMBP3B	A6NNM3	1639 aa		11.36	□□□□□ -0.59
CACNB4-255	ENST00000637530	RIMBP3	Q9UFD9	1639 aa		11.36	□□□□□ -0.59
CACNB4-255	ENST00000637530	PRDM4	Q9UKN5	801 aa		11.35	□□□□□ -0.59
CACNB4-255	ENST00000637530	MS4A1	P11836	297 aa		11.35	□□□□□ -0.59
CACNB4-255	ENST00000637530	PRKRIP1	Q9H875	184 aa	Predicted RBP	11.35	□□□□□ -0.59
CACNB4-255	ENST00000637530	TONSL	Q96HA7	1378 aa		11.35	□□□□□ -0.59
CACNB4-255	ENST00000637530	CNTLN	Q9NXG0	1405 aa		11.34	□□□□□ -0.59
CACNB4-255	ENST00000637530	BCL11B	Q9C0K0	894 aa	Predicted RBP	11.34	□□□□□ -0.59
CACNB4-255	ENST00000637530	PNN	Q9H307	717 aa	Known RBP	11.34	□□□□□ -0.59
CACNB4-255	ENST00000637530	FHAD1	B1AJZ9	1412 aa		11.33	□□□□□ -0.59
CACNB4-255	ENST00000637530	NCOA2	Q15596	1464 aa		11.33	□□□□□ -0.6
CACNB4-255	ENST00000637530	EXOC6	Q8TAG9	804 aa		11.31	□□□□□ -0.6
CACNB4-255	ENST00000637530	CLCN1	P35523	988 aa		11.3	□□□□□ -0.6
CACNB4-255	ENST00000637530	RGS3	P49796	1198 aa		11.3	□□□□□ -0.6
CACNB4-255	ENST00000637530	POGK	Q9P215	609 aa		11.3	□□□□□ -0.6
CACNB4-255	ENST00000637530	HSPA5	P11021	654 aa	Known RBP	11.29	□□□□□ -0.6
CACNB4-255	ENST00000637530	PDIA4	P13667	645 aa	Known RBP	11.29	□□□□□ -0.6
CACNB4-255	ENST00000637530	SKAP1	Q86WV1	359 aa		11.29	□□□□□ -0.6
CACNB4-255	ENST00000637530	SENP3-EIF4A1	A0A087X0R7	540 aa		11.29	□□□□□ -0.6
CACNB4-255	ENST00000637530	KDM5B	Q9UGL1	1544 aa		11.27	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms