RNA–Protein interactions for RNA: ENST00000637519.1

CHRNA7-228, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,084 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-228ENST00000637519 EIF4G3O43432 1585 aaKnown RBP33.56■■■□□ 2.96
CHRNA7-228ENST00000637519 ADAMTS12P58397 1594 aa33.56■■■□□ 2.96
CHRNA7-228ENST00000637519 APLP2Q06481 763 aa33.52■■■□□ 2.96
CHRNA7-228ENST00000637519 P3H3Q8IVL6 736 aa33.52■■■□□ 2.96
CHRNA7-228ENST00000637519 FHAD1B1AJZ9 1412 aa33.52■■■□□ 2.96
CHRNA7-228ENST00000637519 HRCP23327 699 aa33.47■■■□□ 2.95
CHRNA7-228ENST00000637519 SNAPC4Q5SXM2 1469 aa33.45■■■□□ 2.94
CHRNA7-228ENST00000637519 FHOD3Q2V2M9 1422 aa33.43■■■□□ 2.94
CHRNA7-228ENST00000637519 EFCAB5A4FU69 1503 aa33.37■■■□□ 2.93
CHRNA7-228ENST00000637519 KANK4Q5T7N3 995 aaPredicted RBP33.35■■■□□ 2.93
CHRNA7-228ENST00000637519 PCF11O94913 1555 aaKnown RBP33.29■■■□□ 2.92
CHRNA7-228ENST00000637519 SAMD9Q5K651 1589 aa33.27■■■□□ 2.92
CHRNA7-228ENST00000637519 IQGAP2Q13576 1575 aa33.23■■■□□ 2.91
CHRNA7-228ENST00000637519 GRIN2AQ12879 1464 aa33.23■■■□□ 2.91
CHRNA7-228ENST00000637519 MAGI1Q96QZ7 1491 aaPredicted RBP33.23■■■□□ 2.91
CHRNA7-228ENST00000637519 ATP1B4Q9UN42 357 aaPredicted RBP33.19■■■□□ 2.9
CHRNA7-228ENST00000637519 TIAM1Q13009 1591 aa33.17■■■□□ 2.9
CHRNA7-228ENST00000637519 FBLN2P98095 1184 aa33.15■■■□□ 2.9
CHRNA7-228ENST00000637519 SYNJ2O15056 1496 aa33.15■■■□□ 2.9
CHRNA7-228ENST00000637519 CHMP7Q8WUX9 453 aaPredicted RBP33.13■■■□□ 2.89
CHRNA7-228ENST00000637519 FYCO1Q9BQS8 1478 aa33.11■■■□□ 2.89
CHRNA7-228ENST00000637519 FMN1Q68DA7 1419 aa33.1■■■□□ 2.89
CHRNA7-228ENST00000637519 CASKIN1Q8WXD9 1431 aa33.1■■■□□ 2.89
CHRNA7-228ENST00000637519 KIAA0586Q9BVV6 1533 aa33.07■■■□□ 2.88
CHRNA7-228ENST00000637519 CEP170Q5SW79 1584 aa33.07■■■□□ 2.88
CHRNA7-228ENST00000637519 MAP3K1Q13233 1512 aa33.06■■■□□ 2.88
CHRNA7-228ENST00000637519 CFAP43Q8NDM7 1665 aa33.06■■■□□ 2.88
CHRNA7-228ENST00000637519 LRRC9Q6ZRR7 1453 aa33.02■■■□□ 2.88
CHRNA7-228ENST00000637519 UGGT2Q9NYU1 1516 aa33.02■■■□□ 2.88
CHRNA7-228ENST00000637519 HNRNPUL2Q1KMD3 747 aaKnown RBP33.01■■■□□ 2.87
CHRNA7-228ENST00000637519 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33■■■□□ 2.87
CHRNA7-228ENST00000637519 LRRIQ1Q96JM4 1722 aa32.94■■■□□ 2.86
CHRNA7-228ENST00000637519 DISP1Q96F81 1524 aa32.94■■■□□ 2.86
CHRNA7-228ENST00000637519 NUP160Q12769 1436 aa32.93■■■□□ 2.86
CHRNA7-228ENST00000637519 KIAA0556O60303 1618 aa32.91■■■□□ 2.86
CHRNA7-228ENST00000637519 RRBP1Q9P2E9 1410 aaKnown RBP32.88■■■□□ 2.85
CHRNA7-228ENST00000637519 PHLDB1Q86UU1 1377 aa32.83■■■□□ 2.85
CHRNA7-228ENST00000637519 CCER1Q8TC90 406 aaPredicted RBP32.81■■■□□ 2.84
CHRNA7-228ENST00000637519 CCNB3Q8WWL7 1395 aa32.8■■■□□ 2.84
CHRNA7-228ENST00000637519 CHD1O14646 1710 aa32.78■■■□□ 2.84
CHRNA7-228ENST00000637519 ARID3CA6NKF2 412 aa32.77■■■□□ 2.84
CHRNA7-228ENST00000637519 HECW1Q76N89 1606 aa32.76■■■□□ 2.83
CHRNA7-228ENST00000637519 JPH4Q96JJ6 628 aa32.75■■■□□ 2.83
CHRNA7-228ENST00000637519 MTUS2Q5JR59 1369 aa32.74■■■□□ 2.83
CHRNA7-228ENST00000637519 ZEB1P37275 1124 aaPredicted RBP32.71■■■□□ 2.83
CHRNA7-228ENST00000637519 CDK13Q14004 1512 aaKnown RBP32.7■■■□□ 2.83
CHRNA7-228ENST00000637519 MAGI3Q5TCQ9 1506 aa32.69■■■□□ 2.82
CHRNA7-228ENST00000637519 EPRSP07814 1512 aaKnown RBP32.68■■■□□ 2.82
CHRNA7-228ENST00000637519 CCDC18Q5T9S5 1454 aa32.68■■■□□ 2.82
CHRNA7-228ENST00000637519 ITGAEP38570 1179 aa32.67■■■□□ 2.82
CHRNA7-228ENST00000637519 CARMIL2Q6F5E8 1435 aa32.62■■■□□ 2.81
CHRNA7-228ENST00000637519 EHBP1L1Q8N3D4 1523 aa32.61■■■□□ 2.81
CHRNA7-228ENST00000637519 RAPGEF6Q8TEU7 1601 aa32.61■■■□□ 2.81
CHRNA7-228ENST00000637519 NUP153P49790 1475 aaKnown RBP32.6■■■□□ 2.81
CHRNA7-228ENST00000637519 PLB1Q6P1J6 1458 aa32.59■■■□□ 2.81
CHRNA7-228ENST00000637519 FAM50AQ14320 339 aaKnown RBP32.58■■■□□ 2.81
CHRNA7-228ENST00000637519 NCOA2Q15596 1464 aa32.57■■■□□ 2.81
CHRNA7-228ENST00000637519 PRG4Q92954 1404 aaPredicted RBP32.54■■■□□ 2.8
CHRNA7-228ENST00000637519 SUPT6HQ7KZ85 1726 aaKnown RBP32.54■■■□□ 2.8
CHRNA7-228ENST00000637519 FGD6Q6ZV73 1430 aa32.49■■■□□ 2.79
CHRNA7-228ENST00000637519 ARHGEF11O15085 1522 aa32.45■■■□□ 2.79
CHRNA7-228ENST00000637519 MYOM3Q5VTT5 1437 aa32.43■■■□□ 2.78
CHRNA7-228ENST00000637519 SHROOM2Q13796 1616 aa32.41■■■□□ 2.78
CHRNA7-228ENST00000637519 ERCC6L2Q5T890 1561 aa32.39■■■□□ 2.78
CHRNA7-228ENST00000637519 ABCA8O94911 1581 aa32.38■■■□□ 2.77
CHRNA7-228ENST00000637519 PTPRGP23470 1445 aa32.34■■■□□ 2.77
CHRNA7-228ENST00000637519 CLASP1Q7Z460 1538 aa32.33■■■□□ 2.77
CHRNA7-228ENST00000637519 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.32■■■□□ 2.76
CHRNA7-228ENST00000637519 PTPN23Q9H3S7 1636 aa32.29■■■□□ 2.76
CHRNA7-228ENST00000637519 RAB3GAP2Q9H2M9 1393 aa32.28■■■□□ 2.76
CHRNA7-228ENST00000637519 DHX57Q6P158 1386 aaKnown RBP32.27■■■□□ 2.76
CHRNA7-228ENST00000637519 CDK11AQ9UQ88 783 aaPredicted RBP32.25■■■□□ 2.75
CHRNA7-228ENST00000637519 TROQ12816 1431 aaPredicted RBP32.24■■■□□ 2.75
CHRNA7-228ENST00000637519 PTPRKQ15262 1439 aa32.24■■■□□ 2.75
CHRNA7-228ENST00000637519 ATP10BO94823 1461 aa32.23■■■□□ 2.75
CHRNA7-228ENST00000637519 SETD5Q9C0A6 1442 aa32.21■■■□□ 2.75
CHRNA7-228ENST00000637519 KIF14Q15058 1648 aa32.2■■■□□ 2.75
CHRNA7-228ENST00000637519 TCOF1Q13428 1488 aaKnown RBP32.17■■■□□ 2.74
CHRNA7-228ENST00000637519 UACAQ9BZF9 1416 aa32.14■■■□□ 2.74
CHRNA7-228ENST00000637519 MIA2Q96PC5 1412 aa32.13■■■□□ 2.73
CHRNA7-228ENST00000637519 ADCY10Q96PN6 1610 aa32.1■■■□□ 2.73
CHRNA7-228ENST00000637519 PLEKHD1A6NEE1 506 aa32.08■■■□□ 2.73
CHRNA7-228ENST00000637519 ZNF644Q9H582 1327 aaPredicted RBP32.07■■■□□ 2.72
CHRNA7-228ENST00000637519 CHIC2Q9UKJ5 165 aa32.03■■■□□ 2.72
CHRNA7-228ENST00000637519 ABCC2Q92887 1545 aa32.03■■■□□ 2.72
CHRNA7-228ENST00000637519 GPATCH8Q9UKJ3 1502 aaKnown RBP32.02■■■□□ 2.72
CHRNA7-228ENST00000637519 HFM1A2PYH4 1435 aa32.01■■■□□ 2.71
CHRNA7-228ENST00000637519 NAIPQ13075 1403 aa31.98■■■□□ 2.71
CHRNA7-228ENST00000637519 ITSN2Q9NZM3 1697 aa31.97■■■□□ 2.71
CHRNA7-228ENST00000637519 ABCC10Q5T3U5 1492 aa31.96■■■□□ 2.71
CHRNA7-228ENST00000637519 CLSPNQ9HAW4 1339 aa31.96■■■□□ 2.71
CHRNA7-228ENST00000637519 CFDP1Q9UEE9 299 aaPredicted RBP31.96■■■□□ 2.71
CHRNA7-228ENST00000637519 MAPKBP1O60336 1514 aa31.96■■■□□ 2.71
CHRNA7-228ENST00000637519 RRP7BPQ9NSQ0 103 aa31.95■■■□□ 2.71
CHRNA7-228ENST00000637519 ZNF777Q9ULD5 760 aaPredicted RBP31.93■■■□□ 2.7
CHRNA7-228ENST00000637519 CAMSAP2Q08AD1 1489 aa31.93■■■□□ 2.7
CHRNA7-228ENST00000637519 DAPK1P53355 1430 aa31.92■■■□□ 2.7
CHRNA7-228ENST00000637519 CDC42BPAQ5VT25 1732 aa31.91■■■□□ 2.7
CHRNA7-228ENST00000637519 ABCC5O15440 1437 aa31.9■■■□□ 2.7
CHRNA7-228ENST00000637519 DNMT1P26358 1616 aaKnown RBP31.9■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms