RNA–Protein interactions for RNA: ENST00000637189.1

CHRNA7-225, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 2

Gene CHRNA7, Length 6,181 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-225ENST00000637189 ARID4BQ4LE39 1312 aaPredicted RBP16.75■□□□□ 0.27
CHRNA7-225ENST00000637189 TPRNQ4KMQ1 711 aa16.75■□□□□ 0.27
CHRNA7-225ENST00000637189 MIER1Q8N108 512 aa16.72■□□□□ 0.27
CHRNA7-225ENST00000637189 SENP3-EIF4A1A0A087X0R7 540 aa16.71■□□□□ 0.27
CHRNA7-225ENST00000637189 DNTTIP2Q5QJE6 756 aaKnown RBP16.7■□□□□ 0.26
CHRNA7-225ENST00000637189 DEKP35659 375 aaKnown RBP16.69■□□□□ 0.26
CHRNA7-225ENST00000637189 NPM1P06748 294 aaKnown RBP eCLIP16.69■□□□□ 0.26
CHRNA7-225ENST00000637189 NCLP19338 710 aaKnown RBP16.68■□□□□ 0.26
CHRNA7-225ENST00000637189 A0A0G2JS52 829 aa16.66■□□□□ 0.26
CHRNA7-225ENST00000637189 PLEKHG5O94827 1062 aa16.66■□□□□ 0.26
CHRNA7-225ENST00000637189 SENP3Q9H4L4 574 aaPredicted RBP16.66■□□□□ 0.26
CHRNA7-225ENST00000637189 MTUS2Q5JR59 1369 aa16.63■□□□□ 0.25
CHRNA7-225ENST00000637189 TSPY4P0CV99 314 aa16.63■□□□□ 0.25
CHRNA7-225ENST00000637189 TSPY10P0CW01 314 aa16.63■□□□□ 0.25
CHRNA7-225ENST00000637189 LAS1LQ9Y4W2 734 aaKnown RBP16.63■□□□□ 0.25
CHRNA7-225ENST00000637189 TULP1O00294 542 aaPredicted RBP16.61■□□□□ 0.25
CHRNA7-225ENST00000637189 PTMAP06454 111 aaKnown RBP16.6■□□□□ 0.25
CHRNA7-225ENST00000637189 MYH16Q9H6N6 1097 aa16.6■□□□□ 0.25
CHRNA7-225ENST00000637189 RRP7BPQ9NSQ0 103 aa16.6■□□□□ 0.25
CHRNA7-225ENST00000637189 ARID3AQ99856 593 aa16.59■□□□□ 0.25
CHRNA7-225ENST00000637189 ZBTB7CA1YPR0 619 aa16.58■□□□□ 0.25
CHRNA7-225ENST00000637189 EIF4G2P78344 907 aaKnown RBP eCLIP16.57■□□□□ 0.24
CHRNA7-225ENST00000637189 BECN1Q14457 450 aa16.56■□□□□ 0.24
CHRNA7-225ENST00000637189 CLIP1P30622 1438 aa16.55■□□□□ 0.24
CHRNA7-225ENST00000637189 DDRGK1Q96HY6 314 aa16.54■□□□□ 0.24
CHRNA7-225ENST00000637189 TAOK2Q9UL54 1235 aa16.53■□□□□ 0.24
CHRNA7-225ENST00000637189 ZCCHC6Q5VYS8 1495 aaKnown RBP16.53■□□□□ 0.24
CHRNA7-225ENST00000637189 GOLGA6L22H0YM25 854 aa16.51■□□□□ 0.23
CHRNA7-225ENST00000637189 CHMP7Q8WUX9 453 aaPredicted RBP16.51■□□□□ 0.23
CHRNA7-225ENST00000637189 NOP58Q9Y2X3 529 aaKnown RBP16.5■□□□□ 0.23
CHRNA7-225ENST00000637189 PLCB2Q00722 1185 aa16.49■□□□□ 0.23
CHRNA7-225ENST00000637189 PPM1GO15355 546 aaPredicted RBP16.48■□□□□ 0.23
CHRNA7-225ENST00000637189 RGL3Q3MIN7 710 aa16.47■□□□□ 0.23
CHRNA7-225ENST00000637189 C14orf37Q86TY3 774 aa16.47■□□□□ 0.23
CHRNA7-225ENST00000637189 ZRSR1Q15695 479 aaKnown RBP16.47■□□□□ 0.23
CHRNA7-225ENST00000637189 VSIG10Q8N0Z9 540 aa16.47■□□□□ 0.23
CHRNA7-225ENST00000637189 KCNH8Q96L42 1107 aa16.46■□□□□ 0.23
CHRNA7-225ENST00000637189 TNNT3P45378 269 aaPredicted RBP16.44■□□□□ 0.22
CHRNA7-225ENST00000637189 MYO15BQ96JP2 1530 aa16.43■□□□□ 0.22
CHRNA7-225ENST00000637189 PPP1R15AO75807 674 aaPredicted RBP16.43■□□□□ 0.22
CHRNA7-225ENST00000637189 CEP162Q5TB80 1403 aa16.4■□□□□ 0.22
CHRNA7-225ENST00000637189 SUPT16HQ9Y5B9 1047 aaKnown RBP16.4■□□□□ 0.22
CHRNA7-225ENST00000637189 A0A0U1RQG5 324 aaPredicted RBP16.4■□□□□ 0.22
CHRNA7-225ENST00000637189 GOLGA3Q08378 1498 aa16.37■□□□□ 0.21
CHRNA7-225ENST00000637189 RGS3P49796 1198 aa16.37■□□□□ 0.21
CHRNA7-225ENST00000637189 RSF1Q96T23 1441 aaPredicted RBP16.36■□□□□ 0.21
CHRNA7-225ENST00000637189 KNSTRNQ9Y448 316 aa16.35■□□□□ 0.21
CHRNA7-225ENST00000637189 PLEKHD1A6NEE1 506 aa16.35■□□□□ 0.21
CHRNA7-225ENST00000637189 NEUROD2Q15784 382 aa16.34■□□□□ 0.21
CHRNA7-225ENST00000637189 CFAP53Q96M91 514 aa16.34■□□□□ 0.21
CHRNA7-225ENST00000637189 CARD11Q9BXL7 1154 aa16.33■□□□□ 0.21
CHRNA7-225ENST00000637189 FTSJ3Q8IY81 847 aaKnown RBP16.32■□□□□ 0.2
CHRNA7-225ENST00000637189 CASC1Q6TDU7 716 aa16.32■□□□□ 0.2
CHRNA7-225ENST00000637189 MSNP26038 577 aaKnown RBP16.31■□□□□ 0.2
CHRNA7-225ENST00000637189 NCBP3Q53F19 620 aaKnown RBP16.29■□□□□ 0.2
CHRNA7-225ENST00000637189 SIN3AQ96ST3 1273 aa16.29■□□□□ 0.2
CHRNA7-225ENST00000637189 CFDP1Q9UEE9 299 aaPredicted RBP16.29■□□□□ 0.2
CHRNA7-225ENST00000637189 PRKCSHP14314 528 aaPredicted RBP16.28■□□□□ 0.2
CHRNA7-225ENST00000637189 HSP90AA2PQ14568 343 aaPredicted RBP16.28■□□□□ 0.2
CHRNA7-225ENST00000637189 SPRYD3Q8NCJ5 442 aa16.27■□□□□ 0.2
CHRNA7-225ENST00000637189 PODXL2Q9NZ53 605 aa16.27■□□□□ 0.2
CHRNA7-225ENST00000637189 CDCA8Q53HL2 280 aa16.27■□□□□ 0.19
CHRNA7-225ENST00000637189 HSP90AB1P08238 724 aaKnown RBP16.26■□□□□ 0.19
CHRNA7-225ENST00000637189 FRAT1Q92837 279 aaPredicted RBP16.26■□□□□ 0.19
CHRNA7-225ENST00000637189 NAP1L2Q9ULW6 460 aaPredicted RBP16.26■□□□□ 0.19
CHRNA7-225ENST00000637189 PNNQ9H307 717 aaKnown RBP16.26■□□□□ 0.19
CHRNA7-225ENST00000637189 CHAF1AQ13111 956 aaPredicted RBP16.25■□□□□ 0.19
CHRNA7-225ENST00000637189 CC2D1BQ5T0F9 858 aaKnown RBP16.24■□□□□ 0.19
CHRNA7-225ENST00000637189 EEA1Q15075 1411 aa16.24■□□□□ 0.19
CHRNA7-225ENST00000637189 MAPK8IP3Q9UPT6 1336 aa16.24■□□□□ 0.19
CHRNA7-225ENST00000637189 RBM19Q9Y4C8 960 aaKnown RBP16.24■□□□□ 0.19
CHRNA7-225ENST00000637189 L1TD1Q5T7N2 865 aaKnown RBP16.23■□□□□ 0.19
CHRNA7-225ENST00000637189 HAP1P54257 671 aaPredicted RBP16.23■□□□□ 0.19
CHRNA7-225ENST00000637189 WRNQ14191 1432 aaPredicted RBP eCLIP16.22■□□□□ 0.19
CHRNA7-225ENST00000637189 B4GALNT3Q6L9W6 998 aa16.22■□□□□ 0.19
CHRNA7-225ENST00000637189 PPP4R2Q9NY27 417 aa16.22■□□□□ 0.19
CHRNA7-225ENST00000637189 TIMELESSQ9UNS1 1208 aa16.21■□□□□ 0.19
CHRNA7-225ENST00000637189 CCDC180Q9P1Z9 1646 aa16.21■□□□□ 0.19
CHRNA7-225ENST00000637189 FGD1P98174 961 aa16.2■□□□□ 0.18
CHRNA7-225ENST00000637189 GOLGA6L6A8MZA4 724 aa16.2■□□□□ 0.18
CHRNA7-225ENST00000637189 PKNOX2Q96KN3 472 aa16.19■□□□□ 0.18
CHRNA7-225ENST00000637189 POGKQ9P215 609 aa16.17■□□□□ 0.18
CHRNA7-225ENST00000637189 TNIKQ9UKE5 1360 aa16.17■□□□□ 0.18
CHRNA7-225ENST00000637189 NUDCQ9Y266 331 aa16.17■□□□□ 0.18
CHRNA7-225ENST00000637189 KIF27Q86VH2 1401 aa16.16■□□□□ 0.18
CHRNA7-225ENST00000637189 OS9Q13438 667 aaPredicted RBP16.16■□□□□ 0.18
CHRNA7-225ENST00000637189 KCNJ4P48050 445 aa16.16■□□□□ 0.18
CHRNA7-225ENST00000637189 LMOD2Q6P5Q4 547 aa16.15■□□□□ 0.18
CHRNA7-225ENST00000637189 U2SURPO15042 1029 aaKnown RBP16.15■□□□□ 0.18
CHRNA7-225ENST00000637189 CEP164Q9UPV0 1460 aa16.15■□□□□ 0.18
CHRNA7-225ENST00000637189 CALRP27797 417 aaKnown RBP16.15■□□□□ 0.18
CHRNA7-225ENST00000637189 DRC7Q8IY82 874 aa16.15■□□□□ 0.18
CHRNA7-225ENST00000637189 CLSTN1O94985 981 aa16.14■□□□□ 0.17
CHRNA7-225ENST00000637189 GOLGA6L4A6NEF3 574 aa16.13■□□□□ 0.17
CHRNA7-225ENST00000637189 BAZ1BQ9UIG0 1483 aaKnown RBP16.12■□□□□ 0.17
CHRNA7-225ENST00000637189 RSPH6AQ9H0K4 717 aa16.11■□□□□ 0.17
CHRNA7-225ENST00000637189 RB1CC1Q8TDY2 1594 aa16.11■□□□□ 0.17
CHRNA7-225ENST00000637189 NRDCO43847 1150 aa16.11■□□□□ 0.17
CHRNA7-225ENST00000637189 NPHP1O15259 732 aa16.1■□□□□ 0.17
CHRNA7-225ENST00000637189 HSCBQ8IWL3 235 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms