RNA–Protein interactions for RNA: ENST00000637052.1

SYNGAP1-219, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 100 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-219ENST00000637052 ERICH3Q5RHP9 1530 aa13.07□□□□□ -0.32
SYNGAP1-219ENST00000637052 ABCC10Q5T3U5 1492 aa13.04□□□□□ -0.32
SYNGAP1-219ENST00000637052 KDM4FA0A1W2PPD8 638 aa13.03□□□□□ -0.32
SYNGAP1-219ENST00000637052 NPM1P06748 294 aaKnown RBP eCLIP13.02□□□□□ -0.33
SYNGAP1-219ENST00000637052 ADCY10Q96PN6 1610 aa13□□□□□ -0.33
SYNGAP1-219ENST00000637052 DIP2BQ9P265 1576 aa13□□□□□ -0.33
SYNGAP1-219ENST00000637052 TSPOAP1O95153 1857 aa12.99□□□□□ -0.33
SYNGAP1-219ENST00000637052 RUSC2Q8N2Y8 1516 aa12.99□□□□□ -0.33
SYNGAP1-219ENST00000637052 MAPKBP1O60336 1514 aa12.98□□□□□ -0.33
SYNGAP1-219ENST00000637052 KDM6BO15054 1643 aa12.95□□□□□ -0.34
SYNGAP1-219ENST00000637052 TTBK1Q5TCY1 1321 aaPredicted RBP12.93□□□□□ -0.34
SYNGAP1-219ENST00000637052 IGF1RP08069 1367 aa12.92□□□□□ -0.34
SYNGAP1-219ENST00000637052 ILDR1Q86SU0 546 aaPredicted RBP12.91□□□□□ -0.34
SYNGAP1-219ENST00000637052 KIAA0586Q9BVV6 1533 aa12.91□□□□□ -0.34
SYNGAP1-219ENST00000637052 PTPRGP23470 1445 aa12.87□□□□□ -0.35
SYNGAP1-219ENST00000637052 PPRC1Q5VV67 1664 aaKnown RBP12.85□□□□□ -0.35
SYNGAP1-219ENST00000637052 ASXL2Q76L83 1435 aa12.82□□□□□ -0.36
SYNGAP1-219ENST00000637052 KIF27Q86VH2 1401 aa12.82□□□□□ -0.36
SYNGAP1-219ENST00000637052 CUL7Q14999 1698 aa12.81□□□□□ -0.36
SYNGAP1-219ENST00000637052 COL17A1Q9UMD9 1497 aaPredicted RBP12.81□□□□□ -0.36
SYNGAP1-219ENST00000637052 CARMIL1Q5VZK9 1371 aa12.81□□□□□ -0.36
SYNGAP1-219ENST00000637052 TNIKQ9UKE5 1360 aa12.81□□□□□ -0.36
SYNGAP1-219ENST00000637052 ABCC2Q92887 1545 aa12.8□□□□□ -0.36
SYNGAP1-219ENST00000637052 ADGRL1O94910 1474 aa12.79□□□□□ -0.36
SYNGAP1-219ENST00000637052 GLI2P10070 1586 aa12.78□□□□□ -0.36
SYNGAP1-219ENST00000637052 CARMIL2Q6F5E8 1435 aa12.77□□□□□ -0.37
SYNGAP1-219ENST00000637052 PLB1Q6P1J6 1458 aa12.77□□□□□ -0.37
SYNGAP1-219ENST00000637052 UACAQ9BZF9 1416 aa12.75□□□□□ -0.37
SYNGAP1-219ENST00000637052 DISP1Q96F81 1524 aa12.74□□□□□ -0.37
SYNGAP1-219ENST00000637052 UHRF1BP1LA0JNW5 1464 aa12.74□□□□□ -0.37
SYNGAP1-219ENST00000637052 IQGAP2Q13576 1575 aa12.73□□□□□ -0.37
SYNGAP1-219ENST00000637052 EPRSP07814 1512 aaKnown RBP12.73□□□□□ -0.37
SYNGAP1-219ENST00000637052 MAP3K4Q9Y6R4 1608 aa12.72□□□□□ -0.37
SYNGAP1-219ENST00000637052 KDM5BQ9UGL1 1544 aa12.71□□□□□ -0.38
SYNGAP1-219ENST00000637052 ZCCHC11Q5TAX3 1644 aaKnown RBP12.7□□□□□ -0.38
SYNGAP1-219ENST00000637052 HECW2Q9P2P5 1572 aa12.7□□□□□ -0.38
SYNGAP1-219ENST00000637052 UGGT2Q9NYU1 1516 aa12.65□□□□□ -0.38
SYNGAP1-219ENST00000637052 TEX14Q8IWB6 1497 aa12.65□□□□□ -0.38
SYNGAP1-219ENST00000637052 KIAA0556O60303 1618 aa12.64□□□□□ -0.39
SYNGAP1-219ENST00000637052 KCNH8Q96L42 1107 aa12.64□□□□□ -0.39
SYNGAP1-219ENST00000637052 RAPGEF2Q9Y4G8 1499 aa12.63□□□□□ -0.39
SYNGAP1-219ENST00000637052 WDR7Q9Y4E6 1490 aa12.61□□□□□ -0.39
SYNGAP1-219ENST00000637052 CD109Q6YHK3 1445 aa12.6□□□□□ -0.39
SYNGAP1-219ENST00000637052 MAGI3Q5TCQ9 1506 aa12.57□□□□□ -0.4
SYNGAP1-219ENST00000637052 KIF21BO75037 1637 aa12.56□□□□□ -0.4
SYNGAP1-219ENST00000637052 ARID3CA6NKF2 412 aa12.56□□□□□ -0.4
SYNGAP1-219ENST00000637052 CFAP43Q8NDM7 1665 aa12.56□□□□□ -0.4
SYNGAP1-219ENST00000637052 ABCA8O94911 1581 aa12.56□□□□□ -0.4
SYNGAP1-219ENST00000637052 CTTNBP2Q8WZ74 1663 aa12.53□□□□□ -0.4
SYNGAP1-219ENST00000637052 P3H3Q8IVL6 736 aa12.52□□□□□ -0.41
SYNGAP1-219ENST00000637052 FBXO41Q8TF61 875 aa12.51□□□□□ -0.41
SYNGAP1-219ENST00000637052 GOLGA3Q08378 1498 aa12.49□□□□□ -0.41
SYNGAP1-219ENST00000637052 RAPGEF3O95398 923 aa12.49□□□□□ -0.41
SYNGAP1-219ENST00000637052 ARAP3Q8WWN8 1544 aa12.48□□□□□ -0.41
SYNGAP1-219ENST00000637052 ATP10BO94823 1461 aa12.48□□□□□ -0.41
SYNGAP1-219ENST00000637052 ADAMTSL3P82987 1691 aa12.47□□□□□ -0.41
SYNGAP1-219ENST00000637052 PTPRMP28827 1452 aa12.46□□□□□ -0.41
SYNGAP1-219ENST00000637052 PRXQ9BXM0 1461 aa12.44□□□□□ -0.42
SYNGAP1-219ENST00000637052 ABCA9Q8IUA7 1624 aa12.42□□□□□ -0.42
SYNGAP1-219ENST00000637052 ARID4BQ4LE39 1312 aaPredicted RBP12.41□□□□□ -0.42
SYNGAP1-219ENST00000637052 BCORL1Q5H9F3 1711 aa12.41□□□□□ -0.42
SYNGAP1-219ENST00000637052 FRMPD1Q5SYB0 1578 aa12.4□□□□□ -0.42
SYNGAP1-219ENST00000637052 MADDQ8WXG6 1647 aa12.4□□□□□ -0.42
SYNGAP1-219ENST00000637052 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.39□□□□□ -0.43
SYNGAP1-219ENST00000637052 HNRNPUL2Q1KMD3 747 aaKnown RBP12.39□□□□□ -0.43
SYNGAP1-219ENST00000637052 PLPPR3Q6T4P5 718 aa12.39□□□□□ -0.43
SYNGAP1-219ENST00000637052 PHLDB1Q86UU1 1377 aa12.39□□□□□ -0.43
SYNGAP1-219ENST00000637052 HSPA2P54652 639 aa12.38□□□□□ -0.43
SYNGAP1-219ENST00000637052 LMTK3Q96Q04 1460 aa12.38□□□□□ -0.43
SYNGAP1-219ENST00000637052 NEO1Q92859 1461 aa12.37□□□□□ -0.43
SYNGAP1-219ENST00000637052 RIMS1Q86UR5 1692 aaKnown RBP12.36□□□□□ -0.43
SYNGAP1-219ENST00000637052 PCF11O94913 1555 aaKnown RBP12.36□□□□□ -0.43
SYNGAP1-219ENST00000637052 RANGAP1P46060 587 aaPredicted RBP12.36□□□□□ -0.43
SYNGAP1-219ENST00000637052 RAPGEF6Q8TEU7 1601 aa12.36□□□□□ -0.43
SYNGAP1-219ENST00000637052 FAM9AQ8IZU1 332 aaPredicted RBP12.35□□□□□ -0.43
SYNGAP1-219ENST00000637052 SAMD9Q5K651 1589 aa12.35□□□□□ -0.43
SYNGAP1-219ENST00000637052 SIGLEC1Q9BZZ2 1709 aa12.33□□□□□ -0.44
SYNGAP1-219ENST00000637052 NUP153P49790 1475 aaKnown RBP12.33□□□□□ -0.44
SYNGAP1-219ENST00000637052 RICTORQ6R327 1708 aa12.31□□□□□ -0.44
SYNGAP1-219ENST00000637052 AKNAQ7Z591 1439 aa12.31□□□□□ -0.44
SYNGAP1-219ENST00000637052 CSRNP3Q8WYN3 585 aa12.31□□□□□ -0.44
SYNGAP1-219ENST00000637052 DENND4BO75064 1496 aaPredicted RBP12.31□□□□□ -0.44
SYNGAP1-219ENST00000637052 MLECQ14165 292 aa12.3□□□□□ -0.44
SYNGAP1-219ENST00000637052 ARHGEF40Q8TER5 1519 aa12.3□□□□□ -0.44
SYNGAP1-219ENST00000637052 FHOD3Q2V2M9 1422 aa12.29□□□□□ -0.44
SYNGAP1-219ENST00000637052 PLEKHD1A6NEE1 506 aa12.29□□□□□ -0.44
SYNGAP1-219ENST00000637052 YEATS2Q9ULM3 1422 aa12.28□□□□□ -0.44
SYNGAP1-219ENST00000637052 CERKQ8TCT0 537 aa12.28□□□□□ -0.44
SYNGAP1-219ENST00000637052 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.27□□□□□ -0.44
SYNGAP1-219ENST00000637052 FANCAO15360 1455 aa12.27□□□□□ -0.45
SYNGAP1-219ENST00000637052 TTC37Q6PGP7 1564 aa12.26□□□□□ -0.45
SYNGAP1-219ENST00000637052 CEBPAP49715 358 aaPredicted RBP12.24□□□□□ -0.45
SYNGAP1-219ENST00000637052 HECW1Q76N89 1606 aa12.23□□□□□ -0.45
SYNGAP1-219ENST00000637052 ZFYVE16Q7Z3T8 1539 aa12.23□□□□□ -0.45
SYNGAP1-219ENST00000637052 ILDR2Q71H61 639 aa12.23□□□□□ -0.45
SYNGAP1-219ENST00000637052 FER1L4A9Z1Z3 1794 aa12.23□□□□□ -0.45
SYNGAP1-219ENST00000637052 ZMYM4Q5VZL5 1548 aa12.22□□□□□ -0.45
SYNGAP1-219ENST00000637052 POGZQ7Z3K3 1410 aa12.22□□□□□ -0.45
SYNGAP1-219ENST00000637052 SCAPERQ9BY12 1400 aa12.21□□□□□ -0.45
SYNGAP1-219ENST00000637052 CFAP74Q9C0B2 1584 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms