RNA–Protein interactions for RNA: ENST00000636845.1

RYR3-223, Transcript of ryanodine receptor 3, human

TSL 5

Gene RYR3, Length 2,973 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RYR3-223	ENST00000636845	SOGA1	O94964	1423 aa		7.52	□□□□□ -1.21
RYR3-223	ENST00000636845	CCDC88B	A6NC98	1476 aa		7.52	□□□□□ -1.21
RYR3-223	ENST00000636845	RANGAP1	P46060	587 aa	Predicted RBP	7.51	□□□□□ -1.21
RYR3-223	ENST00000636845	ERICH6B	Q5W0A0	696 aa		7.5	□□□□□ -1.21
RYR3-223	ENST00000636845	GOLGA3	Q08378	1498 aa		7.5	□□□□□ -1.21
RYR3-223	ENST00000636845	EEA1	Q15075	1411 aa		7.5	□□□□□ -1.21
RYR3-223	ENST00000636845	ANP32C	O43423	234 aa		7.5	□□□□□ -1.21
RYR3-223	ENST00000636845	RTL5	Q5HYW3	569 aa	Predicted RBP	7.5	□□□□□ -1.21
RYR3-223	ENST00000636845	SALL2	Q9Y467	1007 aa	Predicted RBP	7.5	□□□□□ -1.21
RYR3-223	ENST00000636845	ABCC8	Q09428	1581 aa		7.49	□□□□□ -1.21
RYR3-223	ENST00000636845	IRX6	P78412	446 aa	Predicted RBP	7.49	□□□□□ -1.21
RYR3-223	ENST00000636845	CLIP1	P30622	1438 aa		7.48	□□□□□ -1.21
RYR3-223	ENST00000636845	CECR2	Q9BXF3	1484 aa		7.48	□□□□□ -1.21
RYR3-223	ENST00000636845	CCDC136	Q96JN2	1154 aa		7.48	□□□□□ -1.21
RYR3-223	ENST00000636845	NOP58	Q9Y2X3	529 aa	Known RBP	7.47	□□□□□ -1.21
RYR3-223	ENST00000636845	MROH2B	Q7Z745	1585 aa		7.47	□□□□□ -1.21
RYR3-223	ENST00000636845	VPS8	Q8N3P4	1428 aa		7.46	□□□□□ -1.22
RYR3-223	ENST00000636845	CCER2	I3L3R5	266 aa		7.46	□□□□□ -1.22
RYR3-223	ENST00000636845	RUSC2	Q8N2Y8	1516 aa		7.44	□□□□□ -1.22
RYR3-223	ENST00000636845	HNRNPU	Q00839	825 aa	Known RBP eCLIP	7.44	□□□□□ -1.22
RYR3-223	ENST00000636845	C1QBP	Q07021	282 aa	Known RBP	7.43	□□□□□ -1.22
RYR3-223	ENST00000636845	PPP4R2	Q9NY27	417 aa		7.42	□□□□□ -1.22
RYR3-223	ENST00000636845	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	7.42	□□□□□ -1.22
RYR3-223	ENST00000636845	WIZ	O95785	1651 aa		7.42	□□□□□ -1.22
RYR3-223	ENST00000636845	MAPK8IP2	Q13387	824 aa	Predicted RBP	7.42	□□□□□ -1.22
RYR3-223	ENST00000636845	ANP32A	P39687	249 aa	Known RBP	7.41	□□□□□ -1.22
RYR3-223	ENST00000636845	IL27	Q8NEV9	243 aa		7.41	□□□□□ -1.22
RYR3-223	ENST00000636845	HIRIP3	Q9BW71	556 aa	Predicted RBP	7.41	□□□□□ -1.22
RYR3-223	ENST00000636845	FBLN2	P98095	1184 aa		7.41	□□□□□ -1.22
RYR3-223	ENST00000636845	KDM2A	Q9Y2K7	1162 aa		7.41	□□□□□ -1.22
RYR3-223	ENST00000636845	CEP164	Q9UPV0	1460 aa		7.41	□□□□□ -1.22
RYR3-223	ENST00000636845	PLEKHG5	O94827	1062 aa		7.4	□□□□□ -1.22
RYR3-223	ENST00000636845	PPP1R15A	O75807	674 aa	Predicted RBP	7.4	□□□□□ -1.23
RYR3-223	ENST00000636845	PAK3	O75914	559 aa	Predicted RBP	7.4	□□□□□ -1.23
RYR3-223	ENST00000636845	UBE2Q2	Q8WVN8	375 aa		7.4	□□□□□ -1.23
RYR3-223	ENST00000636845	B4GALNT3	Q6L9W6	998 aa		7.39	□□□□□ -1.23
RYR3-223	ENST00000636845	EIF4G1	Q04637	1599 aa	Known RBP	7.39	□□□□□ -1.23
RYR3-223	ENST00000636845	EIF5B	O60841	1220 aa	Known RBP	7.38	□□□□□ -1.23
RYR3-223	ENST00000636845	ZBTB47	Q9UFB7	747 aa	Predicted RBP	7.38	□□□□□ -1.23
RYR3-223	ENST00000636845	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	7.37	□□□□□ -1.23
RYR3-223	ENST00000636845	NPM3	O75607	178 aa	Known RBP	7.36	□□□□□ -1.23
RYR3-223	ENST00000636845	KANK4	Q5T7N3	995 aa	Predicted RBP	7.36	□□□□□ -1.23
RYR3-223	ENST00000636845	SIN3A	Q96ST3	1273 aa		7.35	□□□□□ -1.23
RYR3-223	ENST00000636845	IPO9	Q96P70	1041 aa	Known RBP	7.35	□□□□□ -1.23
RYR3-223	ENST00000636845	CCNB3	Q8WWL7	1395 aa		7.34	□□□□□ -1.24
RYR3-223	ENST00000636845	RAB3GAP2	Q9H2M9	1393 aa		7.34	□□□□□ -1.24
RYR3-223	ENST00000636845	TMEM132A	Q24JP5	1023 aa		7.33	□□□□□ -1.24
RYR3-223	ENST00000636845	RNF39	Q9H2S5	420 aa		7.33	□□□□□ -1.24
RYR3-223	ENST00000636845	NACAD	O15069	1562 aa		7.33	□□□□□ -1.24
RYR3-223	ENST00000636845	NPM2	Q86SE8	214 aa	Known RBP	7.32	□□□□□ -1.24
RYR3-223	ENST00000636845	KIF21B	O75037	1637 aa		7.32	□□□□□ -1.24
RYR3-223	ENST00000636845	WDR97	A6NE52	1622 aa		7.31	□□□□□ -1.24
RYR3-223	ENST00000636845	RRBP1	Q9P2E9	1410 aa	Known RBP	7.31	□□□□□ -1.24
RYR3-223	ENST00000636845	NEFM	P07197	916 aa		7.31	□□□□□ -1.24
RYR3-223	ENST00000636845	C14orf37	Q86TY3	774 aa		7.31	□□□□□ -1.24
RYR3-223	ENST00000636845	BAZ1B	Q9UIG0	1483 aa	Known RBP	7.31	□□□□□ -1.24
RYR3-223	ENST00000636845	RAPGEF2	Q9Y4G8	1499 aa		7.3	□□□□□ -1.24
RYR3-223	ENST00000636845	CUX2	O14529	1486 aa		7.29	□□□□□ -1.24
RYR3-223	ENST00000636845	LAS1L	Q9Y4W2	734 aa	Known RBP	7.29	□□□□□ -1.24
RYR3-223	ENST00000636845	TOP2A	P11388	1531 aa	Known RBP	7.28	□□□□□ -1.24
RYR3-223	ENST00000636845	FAM9B	Q8IZU0	186 aa		7.28	□□□□□ -1.24
RYR3-223	ENST00000636845	USP35	Q9P2H5	1018 aa		7.28	□□□□□ -1.24
RYR3-223	ENST00000636845	MAPKBP1	O60336	1514 aa		7.28	□□□□□ -1.24
RYR3-223	ENST00000636845	SETD5	Q9C0A6	1442 aa		7.27	□□□□□ -1.25
RYR3-223	ENST00000636845	FAM50A	Q14320	339 aa	Known RBP	7.27	□□□□□ -1.25
RYR3-223	ENST00000636845	TONSL	Q96HA7	1378 aa		7.27	□□□□□ -1.25
RYR3-223	ENST00000636845	SMARCA2	P51531	1590 aa		7.26	□□□□□ -1.25
RYR3-223	ENST00000636845	WASHC2A	Q641Q2	1341 aa		7.26	□□□□□ -1.25
RYR3-223	ENST00000636845	PPM1G	O15355	546 aa	Predicted RBP	7.25	□□□□□ -1.25
RYR3-223	ENST00000636845	BRPF3	Q9ULD4	1205 aa		7.25	□□□□□ -1.25
RYR3-223	ENST00000636845	C11orf95	C9JLR9	678 aa	Predicted RBP	7.25	□□□□□ -1.25
RYR3-223	ENST00000636845	PKNOX2	Q96KN3	472 aa		7.25	□□□□□ -1.25
RYR3-223	ENST00000636845	MRS2	Q9HD23	443 aa		7.25	□□□□□ -1.25
RYR3-223	ENST00000636845	POTEH	Q6S545	545 aa		7.24	□□□□□ -1.25
RYR3-223	ENST00000636845	GLIPR1L2	Q4G1C9	344 aa		7.23	□□□□□ -1.25
RYR3-223	ENST00000636845	ZBED9	Q6R2W3	1325 aa		7.23	□□□□□ -1.25
RYR3-223	ENST00000636845	GSE1	Q14687	1217 aa		7.22	□□□□□ -1.25
RYR3-223	ENST00000636845	WASHC2C	Q9Y4E1	1318 aa		7.22	□□□□□ -1.25
RYR3-223	ENST00000636845	ARAP1	Q96P48	1450 aa		7.22	□□□□□ -1.25
RYR3-223	ENST00000636845	RSPH6A	Q9H0K4	717 aa		7.21	□□□□□ -1.25
RYR3-223	ENST00000636845	CCDC184	Q52MB2	194 aa		7.2	□□□□□ -1.26
RYR3-223	ENST00000636845	SYNJ1	O43426	1573 aa		7.18	□□□□□ -1.26
RYR3-223	ENST00000636845	PRKRIP1	Q9H875	184 aa	Predicted RBP	7.17	□□□□□ -1.26
RYR3-223	ENST00000636845	AKNA	Q7Z591	1439 aa		7.17	□□□□□ -1.26
RYR3-223	ENST00000636845	TCERG1	O14776	1098 aa	Known RBP	7.17	□□□□□ -1.26
RYR3-223	ENST00000636845	ATP1B4	Q9UN42	357 aa	Predicted RBP	7.17	□□□□□ -1.26
RYR3-223	ENST00000636845	HSPA5	P11021	654 aa	Known RBP	7.17	□□□□□ -1.26
RYR3-223	ENST00000636845	PDE4A	P27815	886 aa		7.17	□□□□□ -1.26
RYR3-223	ENST00000636845	EIF4G2	P78344	907 aa	Known RBP eCLIP	7.17	□□□□□ -1.26
RYR3-223	ENST00000636845	CNGB1	Q14028	1251 aa	Predicted RBP	7.17	□□□□□ -1.26
RYR3-223	ENST00000636845	VSIG10	Q8N0Z9	540 aa		7.17	□□□□□ -1.26
RYR3-223	ENST00000636845	DDRGK1	Q96HY6	314 aa		7.17	□□□□□ -1.26
RYR3-223	ENST00000636845	NUDC	Q9Y266	331 aa		7.16	□□□□□ -1.26
RYR3-223	ENST00000636845	FRAT1	Q92837	279 aa	Predicted RBP	7.16	□□□□□ -1.26
RYR3-223	ENST00000636845	SMARCA4	P51532	1647 aa		7.15	□□□□□ -1.27
RYR3-223	ENST00000636845	NFKBIB	Q15653	356 aa		7.15	□□□□□ -1.27
RYR3-223	ENST00000636845	FHAD1	B1AJZ9	1412 aa		7.14	□□□□□ -1.27
RYR3-223	ENST00000636845	FAM43A	Q8N2R8	423 aa		7.14	□□□□□ -1.27
RYR3-223	ENST00000636845	SMG6	Q86US8	1419 aa	Known RBP	7.13	□□□□□ -1.27
RYR3-223	ENST00000636845	CNTLN	Q9NXG0	1405 aa		7.13	□□□□□ -1.27

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