RNA–Protein interactions for RNA: ENST00000636046.1

CDKL5-210, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-210ENST00000636046 KRTAP5-4Q6L8H1 288 aa0.52□□□□□ -2.33
CDKL5-210ENST00000636046 TREML4Q6UXN2 200 aa0.52□□□□□ -2.33
CDKL5-210ENST00000636046 KCTD17Q8N5Z5 321 aa0.52□□□□□ -2.33
CDKL5-210ENST00000636046 REM2Q8IYK8 340 aaPredicted RBP0.51□□□□□ -2.33
CDKL5-210ENST00000636046 KRTAP4-4Q9BYR3 166 aa0.51□□□□□ -2.33
CDKL5-210ENST00000636046 FAM181BA6NEQ2 426 aa0.5□□□□□ -2.33
CDKL5-210ENST00000636046 PITPNM1O00562 1244 aa0.5□□□□□ -2.33
CDKL5-210ENST00000636046 LCE2AQ5TA79 106 aaPredicted RBP0.5□□□□□ -2.33
CDKL5-210ENST00000636046 KRTAP5-1Q6L8H4 278 aa0.5□□□□□ -2.33
CDKL5-210ENST00000636046 Q8N3U1 123 aa0.5□□□□□ -2.33
CDKL5-210ENST00000636046 AKT1S1Q96B36 256 aa0.5□□□□□ -2.33
CDKL5-210ENST00000636046 SPINK5Q9NQ38 1064 aaPredicted RBP0.5□□□□□ -2.33
CDKL5-210ENST00000636046 METRNQ9UJH8 293 aa0.5□□□□□ -2.33
CDKL5-210ENST00000636046 POTEB3A0JP26 581 aa0.49□□□□□ -2.33
CDKL5-210ENST00000636046 PSPNO60542 156 aa0.49□□□□□ -2.33
CDKL5-210ENST00000636046 PRKAR2AP13861 404 aaKnown RBP0.49□□□□□ -2.33
CDKL5-210ENST00000636046 POTEBQ6S5H4 581 aa0.49□□□□□ -2.33
CDKL5-210ENST00000636046 KRTAP5-2Q701N4 177 aa0.49□□□□□ -2.33
CDKL5-210ENST00000636046 CCER1Q8TC90 406 aaPredicted RBP0.49□□□□□ -2.33
CDKL5-210ENST00000636046 KCTD12Q96CX2 325 aaKnown RBP0.49□□□□□ -2.33
CDKL5-210ENST00000636046 KRTAP9-3Q9BYQ3 159 aa0.49□□□□□ -2.33
CDKL5-210ENST00000636046 DNAJC5BQ9UF47 199 aa0.49□□□□□ -2.33
CDKL5-210ENST00000636046 ARID1BQ8NFD5 2236 aaPredicted RBP0.48□□□□□ -2.33
CDKL5-210ENST00000636046 LAPTM4AQ15012 233 aa0.48□□□□□ -2.33
CDKL5-210ENST00000636046 HS3ST6Q96QI5 342 aa0.48□□□□□ -2.33
CDKL5-210ENST00000636046 AVENQ9NQS1 362 aaPredicted RBP0.48□□□□□ -2.33
CDKL5-210ENST00000636046 ABCB7O75027 752 aa0.47□□□□□ -2.33
CDKL5-210ENST00000636046 C7P10643 843 aa0.47□□□□□ -2.33
CDKL5-210ENST00000636046 EMP3P54852 163 aa0.47□□□□□ -2.33
CDKL5-210ENST00000636046 PELP1Q8IZL8 1130 aaKnown RBP0.47□□□□□ -2.33
CDKL5-210ENST00000636046 FAM205CA6NFA0 338 aa0.46□□□□□ -2.34
CDKL5-210ENST00000636046 WIPF1O43516 503 aa0.46□□□□□ -2.34
CDKL5-210ENST00000636046 KRTAP5-8O75690 187 aa0.46□□□□□ -2.34
CDKL5-210ENST00000636046 PTGER2P43116 358 aa0.46□□□□□ -2.34
CDKL5-210ENST00000636046 FZD5Q13467 585 aa0.46□□□□□ -2.34
CDKL5-210ENST00000636046 LCE5AQ5TCM9 118 aa0.46□□□□□ -2.34
CDKL5-210ENST00000636046 WFS1O76024 890 aa0.45□□□□□ -2.34
CDKL5-210ENST00000636046 YBX3P16989 372 aaKnown RBP eCLIP0.45□□□□□ -2.34
CDKL5-210ENST00000636046 SLC39A7Q92504 469 aa0.45□□□□□ -2.34
CDKL5-210ENST00000636046 HCSTQ9UBK5 93 aa0.45□□□□□ -2.34
CDKL5-210ENST00000636046 GALR2O43603 387 aaPredicted RBP0.44□□□□□ -2.34
CDKL5-210ENST00000636046 CD44P16070 742 aaKnown RBP0.44□□□□□ -2.34
CDKL5-210ENST00000636046 KRTAP5-11Q6L8G4 156 aa0.44□□□□□ -2.34
CDKL5-210ENST00000636046 SLAIN1Q8ND83 568 aa0.44□□□□□ -2.34
CDKL5-210ENST00000636046 PPP6R1Q9UPN7 881 aa0.44□□□□□ -2.34
CDKL5-210ENST00000636046 GFRA3O60609 400 aa0.43□□□□□ -2.34
CDKL5-210ENST00000636046 ADAM23O75077 832 aa0.43□□□□□ -2.34
CDKL5-210ENST00000636046 SNPHO15079 494 aa0.42□□□□□ -2.34
CDKL5-210ENST00000636046 ADRA2BP18089 450 aa0.42□□□□□ -2.34
CDKL5-210ENST00000636046 COL9A3Q14050 684 aaPredicted RBP0.42□□□□□ -2.34
CDKL5-210ENST00000636046 GPAT2Q6NUI2 795 aa0.42□□□□□ -2.34
CDKL5-210ENST00000636046 TMEM151AQ8N4L1 468 aa0.42□□□□□ -2.34
CDKL5-210ENST00000636046 A0A0G2JS52 829 aa0.41□□□□□ -2.34
CDKL5-210ENST00000636046 GDF11O95390 407 aa0.41□□□□□ -2.34
CDKL5-210ENST00000636046 IGHA1P01876 353 aa0.41□□□□□ -2.34
CDKL5-210ENST00000636046 KCNMA1Q12791 1236 aa0.41□□□□□ -2.34
CDKL5-210ENST00000636046 GRWD1Q9BQ67 446 aaKnown RBP eCLIP0.41□□□□□ -2.34
CDKL5-210ENST00000636046 KRTAP4-3Q9BYR4 195 aa0.41□□□□□ -2.34
CDKL5-210ENST00000636046 HOXD11P31277 338 aaPredicted RBP0.4□□□□□ -2.35
CDKL5-210ENST00000636046 SCAF1Q9H7N4 1312 aaKnown RBP0.39□□□□□ -2.35
CDKL5-210ENST00000636046 MUC5BQ9HC84 5762 aaPredicted RBP0.39□□□□□ -2.35
CDKL5-210ENST00000636046 POTECB2RU33 542 aa0.39□□□□□ -2.35
CDKL5-210ENST00000636046 NRG2O14511 850 aaPredicted RBP0.39□□□□□ -2.35
CDKL5-210ENST00000636046 TRHP20396 242 aaPredicted RBP0.39□□□□□ -2.35
CDKL5-210ENST00000636046 GSK3AP49840 483 aa0.39□□□□□ -2.35
CDKL5-210ENST00000636046 LCE4AQ5TA78 99 aa0.39□□□□□ -2.35
CDKL5-210ENST00000636046 ZNF579Q8NAF0 562 aaKnown RBP0.39□□□□□ -2.35
CDKL5-210ENST00000636046 ZSCAN1Q8NBB4 408 aa0.39□□□□□ -2.35
CDKL5-210ENST00000636046 GPR98Q8WXG9 6306 aa0.39□□□□□ -2.35
CDKL5-210ENST00000636046 KRTAP9-7A8MTY7 169 aa0.38□□□□□ -2.35
CDKL5-210ENST00000636046 KRTAP10-7P60409 375 aaPredicted RBP0.38□□□□□ -2.35
CDKL5-210ENST00000636046 RASSF7Q02833 373 aa0.38□□□□□ -2.35
CDKL5-210ENST00000636046 NFX1Q12986 1120 aaKnown RBP0.38□□□□□ -2.35
CDKL5-210ENST00000636046 IFFO2Q5TF58 517 aa0.38□□□□□ -2.35
CDKL5-210ENST00000636046 AHNAKQ09666 5890 aaKnown RBP0.38□□□□□ -2.35
CDKL5-210ENST00000636046 ASTLQ6HA08 431 aaPredicted RBP0.37□□□□□ -2.35
CDKL5-210ENST00000636046 POTEFA5A3E0 1075 aa0.36□□□□□ -2.35
CDKL5-210ENST00000636046 GSC2O15499 205 aa0.36□□□□□ -2.35
CDKL5-210ENST00000636046 ATMINO43313 823 aaPredicted RBP0.36□□□□□ -2.35
CDKL5-210ENST00000636046 COL9A1P20849 921 aa0.36□□□□□ -2.35
CDKL5-210ENST00000636046 TXKP42681 527 aa0.36□□□□□ -2.35
CDKL5-210ENST00000636046 ANKRD13DQ6ZTN6 518 aa0.36□□□□□ -2.35
CDKL5-210ENST00000636046 KRTAP5-5Q701N2 237 aaPredicted RBP0.36□□□□□ -2.35
CDKL5-210ENST00000636046 ATF5Q9Y2D1 282 aaPredicted RBP0.36□□□□□ -2.35
CDKL5-210ENST00000636046 K7ELQ4 463 aaPredicted RBP0.35□□□□□ -2.35
CDKL5-210ENST00000636046 SLURP2P0DP57 97 aa0.35□□□□□ -2.35
CDKL5-210ENST00000636046 FOXK2Q01167 660 aa0.35□□□□□ -2.35
CDKL5-210ENST00000636046 CHADLQ6NUI6 762 aa0.35□□□□□ -2.35
CDKL5-210ENST00000636046 ZNF219Q9P2Y4 722 aaPredicted RBP0.35□□□□□ -2.35
CDKL5-210ENST00000636046 ZRANB1Q9UGI0 708 aa0.35□□□□□ -2.35
CDKL5-210ENST00000636046 DNMT3AQ9Y6K1 912 aaPredicted RBP0.35□□□□□ -2.35
CDKL5-210ENST00000636046 SERINC4A6NH21 518 aa0.34□□□□□ -2.36
CDKL5-210ENST00000636046 KRTAP10-9P60411 292 aa0.34□□□□□ -2.36
CDKL5-210ENST00000636046 LCE2CQ5TA81 110 aa0.34□□□□□ -2.36
CDKL5-210ENST00000636046 NTN5Q8WTR8 489 aaPredicted RBP0.34□□□□□ -2.36
CDKL5-210ENST00000636046 ERBB3P21860 1342 aa0.34□□□□□ -2.36
CDKL5-210ENST00000636046 RNF225M0QZC1 329 aaPredicted RBP0.33□□□□□ -2.36
CDKL5-210ENST00000636046 SEC24BO95487 1268 aa0.33□□□□□ -2.36
CDKL5-210ENST00000636046 JAG2Q9Y219 1238 aa0.33□□□□□ -2.36
CDKL5-210ENST00000636046 MSTNO14793 375 aa0.32□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms