RNA–Protein interactions for RNA: ENST00000635966.1

LINC00598-209, long intergenic non-protein coding RNA 598, humanhuman

TSL 5 BASIC

Gene LINC00598, Length 1,148 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00598-209ENST00000635966 EIF4G1Q04637 1599 aaKnown RBP12.81□□□□□ -0.36
LINC00598-209ENST00000635966 MNX1P50219 401 aaPredicted RBP12.78□□□□□ -0.36
LINC00598-209ENST00000635966 DNAJC5Q9H3Z4 198 aa12.75□□□□□ -0.37
LINC00598-209ENST00000635966 PAK3O75914 559 aaPredicted RBP12.73□□□□□ -0.37
LINC00598-209ENST00000635966 CD44P16070 742 aaKnown RBP12.73□□□□□ -0.37
LINC00598-209ENST00000635966 SCRIBQ14160 1630 aa12.73□□□□□ -0.37
LINC00598-209ENST00000635966 C19orf67A6NJJ6 358 aa12.72□□□□□ -0.37
LINC00598-209ENST00000635966 IFNLR1Q8IU57 520 aaPredicted RBP12.68□□□□□ -0.38
LINC00598-209ENST00000635966 ZRANB1Q9UGI0 708 aa12.65□□□□□ -0.38
LINC00598-209ENST00000635966 TSPYL2Q9H2G4 693 aaPredicted RBP12.63□□□□□ -0.39
LINC00598-209ENST00000635966 SPOCK2Q92563 424 aa12.62□□□□□ -0.39
LINC00598-209ENST00000635966 EVX2Q03828 476 aa12.61□□□□□ -0.39
LINC00598-209ENST00000635966 FAM212AQ96EL1 285 aa12.6□□□□□ -0.39
LINC00598-209ENST00000635966 NUBP1P53384 320 aa12.59□□□□□ -0.39
LINC00598-209ENST00000635966 RASEFQ8IZ41 740 aa12.59□□□□□ -0.39
LINC00598-209ENST00000635966 DCAF8Q5TAQ9 597 aa12.57□□□□□ -0.4
LINC00598-209ENST00000635966 SP7Q8TDD2 431 aaPredicted RBP12.56□□□□□ -0.4
LINC00598-209ENST00000635966 GSE1Q14687 1217 aa12.51□□□□□ -0.41
LINC00598-209ENST00000635966 ZNF579Q8NAF0 562 aaKnown RBP12.5□□□□□ -0.41
LINC00598-209ENST00000635966 CIZ1Q9ULV3 898 aaPredicted RBP12.5□□□□□ -0.41
LINC00598-209ENST00000635966 CLCN6P51797 869 aa12.47□□□□□ -0.41
LINC00598-209ENST00000635966 PHF12Q96QT6 1004 aa12.47□□□□□ -0.41
LINC00598-209ENST00000635966 CCDC61Q9Y6R9 512 aa12.47□□□□□ -0.41
LINC00598-209ENST00000635966 CUX2O14529 1486 aa12.46□□□□□ -0.42
LINC00598-209ENST00000635966 GABBR2O75899 941 aa12.42□□□□□ -0.42
LINC00598-209ENST00000635966 NCAPD3P42695 1498 aa12.39□□□□□ -0.43
LINC00598-209ENST00000635966 PYGBP11216 843 aa12.38□□□□□ -0.43
LINC00598-209ENST00000635966 KIF12Q96FN5 646 aa12.37□□□□□ -0.43
LINC00598-209ENST00000635966 ERCC6Q03468 1493 aa12.34□□□□□ -0.43
LINC00598-209ENST00000635966 MAP3K13O43283 966 aa12.34□□□□□ -0.43
LINC00598-209ENST00000635966 PCDHB13Q9Y5F0 798 aa12.33□□□□□ -0.44
LINC00598-209ENST00000635966 GALR2O43603 387 aaPredicted RBP12.32□□□□□ -0.44
LINC00598-209ENST00000635966 TRIM41Q8WV44 630 aa12.32□□□□□ -0.44
LINC00598-209ENST00000635966 MS4A3Q96HJ5 214 aa12.31□□□□□ -0.44
LINC00598-209ENST00000635966 SGIP1Q9BQI5 828 aa12.3□□□□□ -0.44
LINC00598-209ENST00000635966 DCBLD2Q96PD2 775 aa12.29□□□□□ -0.44
LINC00598-209ENST00000635966 CHRM1P11229 460 aaPredicted RBP12.28□□□□□ -0.44
LINC00598-209ENST00000635966 ATAD2BQ9ULI0 1458 aa12.27□□□□□ -0.44
LINC00598-209ENST00000635966 ZNF467Q7Z7K2 595 aaPredicted RBP12.24□□□□□ -0.45
LINC00598-209ENST00000635966 SMARCA2P51531 1590 aa12.23□□□□□ -0.45
LINC00598-209ENST00000635966 HMGXB3Q12766 1538 aa12.23□□□□□ -0.45
LINC00598-209ENST00000635966 ECM2O94769 699 aaPredicted RBP12.23□□□□□ -0.45
LINC00598-209ENST00000635966 IFNL1Q8IU54 200 aa12.23□□□□□ -0.45
LINC00598-209ENST00000635966 PCDHB8Q9UN66 801 aa12.21□□□□□ -0.45
LINC00598-209ENST00000635966 PKD2Q13563 968 aa12.18□□□□□ -0.46
LINC00598-209ENST00000635966 NESP48681 1621 aa12.17□□□□□ -0.46
LINC00598-209ENST00000635966 SMARCA4P51532 1647 aa12.16□□□□□ -0.46
LINC00598-209ENST00000635966 TIE1P35590 1138 aa12.15□□□□□ -0.46
LINC00598-209ENST00000635966 TRPC6Q9Y210 931 aa12.14□□□□□ -0.47
LINC00598-209ENST00000635966 BAZ1BQ9UIG0 1483 aaKnown RBP12.12□□□□□ -0.47
LINC00598-209ENST00000635966 RIOK3O14730 519 aaKnown RBP12.11□□□□□ -0.47
LINC00598-209ENST00000635966 TMEM106CQ9BVX2 250 aa12.11□□□□□ -0.47
LINC00598-209ENST00000635966 TAOK2Q9UL54 1235 aa12.11□□□□□ -0.47
LINC00598-209ENST00000635966 THOC2Q8NI27 1593 aaKnown RBP12.1□□□□□ -0.47
LINC00598-209ENST00000635966 PEG3Q9GZU2 1588 aa12.1□□□□□ -0.47
LINC00598-209ENST00000635966 LAMC3Q9Y6N6 1575 aa12.1□□□□□ -0.47
LINC00598-209ENST00000635966 PDAP1Q13442 181 aaKnown RBP12.1□□□□□ -0.47
LINC00598-209ENST00000635966 AMER1Q5JTC6 1135 aaPredicted RBP12.1□□□□□ -0.47
LINC00598-209ENST00000635966 BMP2KQ9NSY1 1161 aaPredicted RBP12.1□□□□□ -0.47
LINC00598-209ENST00000635966 BAZ1AQ9NRL2 1556 aaPredicted RBP12.09□□□□□ -0.47
LINC00598-209ENST00000635966 ATMINO43313 823 aaPredicted RBP12.09□□□□□ -0.47
LINC00598-209ENST00000635966 POTEIP0CG38 1075 aa12.09□□□□□ -0.47
LINC00598-209ENST00000635966 PSEN1P49768 467 aa12.09□□□□□ -0.47
LINC00598-209ENST00000635966 ASTLQ6HA08 431 aaPredicted RBP12.09□□□□□ -0.47
LINC00598-209ENST00000635966 TTLL13PA6NNM8 815 aa12.08□□□□□ -0.48
LINC00598-209ENST00000635966 PDS5BQ9NTI5 1447 aa12.07□□□□□ -0.48
LINC00598-209ENST00000635966 ATN1P54259 1190 aaPredicted RBP12.06□□□□□ -0.48
LINC00598-209ENST00000635966 RGL2O15211 777 aa12.05□□□□□ -0.48
LINC00598-209ENST00000635966 VGFO15240 615 aaPredicted RBP12.05□□□□□ -0.48
LINC00598-209ENST00000635966 GOLGA2Q08379 1002 aa12.05□□□□□ -0.48
LINC00598-209ENST00000635966 RNF25Q96BH1 459 aaPredicted RBP12.05□□□□□ -0.48
LINC00598-209ENST00000635966 TRIM35Q9UPQ4 493 aa12.03□□□□□ -0.48
LINC00598-209ENST00000635966 PELP1Q8IZL8 1130 aaKnown RBP12□□□□□ -0.49
LINC00598-209ENST00000635966 SLC39A7Q92504 469 aa12□□□□□ -0.49
LINC00598-209ENST00000635966 CADPSQ9ULU8 1353 aa11.98□□□□□ -0.49
LINC00598-209ENST00000635966 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.98□□□□□ -0.49
LINC00598-209ENST00000635966 ZFP91Q96JP5 570 aaPredicted RBP11.98□□□□□ -0.49
LINC00598-209ENST00000635966 RTN4Q9NQC3 1192 aaKnown RBP11.98□□□□□ -0.49
LINC00598-209ENST00000635966 KIF21AQ7Z4S6 1674 aa11.97□□□□□ -0.49
LINC00598-209ENST00000635966 C7P10643 843 aa11.97□□□□□ -0.49
LINC00598-209ENST00000635966 MKRN3Q13064 507 aaKnown RBP11.96□□□□□ -0.49
LINC00598-209ENST00000635966 CABP2Q9NPB3 220 aa11.96□□□□□ -0.49
LINC00598-209ENST00000635966 METRNQ9UJH8 293 aa11.96□□□□□ -0.49
LINC00598-209ENST00000635966 MROH2BQ7Z745 1585 aa11.96□□□□□ -0.5
LINC00598-209ENST00000635966 MRC2Q9UBG0 1479 aa11.95□□□□□ -0.5
LINC00598-209ENST00000635966 STK25O00506 426 aa11.94□□□□□ -0.5
LINC00598-209ENST00000635966 SEC24BO95487 1268 aa11.94□□□□□ -0.5
LINC00598-209ENST00000635966 IER5LQ5T953 404 aa11.93□□□□□ -0.5
LINC00598-209ENST00000635966 WDR62O43379 1518 aa11.92□□□□□ -0.5
LINC00598-209ENST00000635966 BCL11BQ9C0K0 894 aaPredicted RBP11.92□□□□□ -0.5
LINC00598-209ENST00000635966 STK24Q9Y6E0 443 aa11.92□□□□□ -0.5
LINC00598-209ENST00000635966 PLCG2P16885 1265 aa11.87□□□□□ -0.51
LINC00598-209ENST00000635966 CHGAP10645 457 aaKnown RBP11.86□□□□□ -0.51
LINC00598-209ENST00000635966 EFCAB3Q8N7B9 438 aa11.85□□□□□ -0.51
LINC00598-209ENST00000635966 CEP164Q9UPV0 1460 aa11.84□□□□□ -0.51
LINC00598-209ENST00000635966 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.84□□□□□ -0.51
LINC00598-209ENST00000635966 OCEL1Q9H607 264 aa11.83□□□□□ -0.52
LINC00598-209ENST00000635966 IRX5P78411 483 aaPredicted RBP11.81□□□□□ -0.52
LINC00598-209ENST00000635966 LHX8Q68G74 356 aa11.81□□□□□ -0.52
LINC00598-209ENST00000635966 COLQQ9Y215 455 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms